| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is 37679857
Identifier: 37679857
GI number: 37679857
Start: 1727883
End: 1728056
Strand: Direct
Name: 37679857
Synonym: VV1673
Alternate gene names: NA
Gene position: 1727883-1728056 (Clockwise)
Preceding gene: 37679856
Following gene: 37679858
Centisome position: 51.51
GC content: 39.66
Gene sequence:
>174_bases ATGGATTTCGGTACAATTCACAGTATTTATACCGTTGTACTTTTCGTTAGTTTTATTGGCATTGTTGCTTGGGCATACAG CAAAAAGCGTAAAGCGAGTTTTGATGAGGCCGCCAACCTTGTTTTTGCTGATGAAGAGAAATCTAGCCCAACTAAACAAG GAGTGACGAAGTAA
Upstream 100 bases:
>100_bases TTGCAAACGCATCCAAAGATGTTGAAGGAAAAACGGAGATGGATGCCATCATCGCTTACCTTCAGTCTCTTGGTCATGCA ATGAAATAAGGGGGCATATC
Downstream 100 bases:
>100_bases TGACTACATTCTGGAGTCTCTGGATTATCGTGATTACTGTCGGTACGCTTGTTGGCTGTGCTGTACTTCTTTACTGGTGC GCTAAAGATAAAATGGGCGT
Product: Cbb3-type cytochrome oxidase, subunit 3
Products: ferricytochrome c; H2O
Alternate protein names: Cytochrome C Oxidase Subunit CcoQ; Cytochrome C Oxidase Cbb3-Type CcoQ Subunit; Cytochrome Oxidase Component FixQ
Number of amino acids: Translated: 57; Mature: 57
Protein sequence:
>57_residues MDFGTIHSIYTVVLFVSFIGIVAWAYSKKRKASFDEAANLVFADEEKSSPTKQGVTK
Sequences:
>Translated_57_residues MDFGTIHSIYTVVLFVSFIGIVAWAYSKKRKASFDEAANLVFADEEKSSPTKQGVTK >Mature_57_residues MDFGTIHSIYTVVLFVSFIGIVAWAYSKKRKASFDEAANLVFADEEKSSPTKQGVTK
Specific function: Unknown
COG id: COG4736
COG function: function code O; Cbb3-type cytochrome oxidase, subunit 3
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 1.9.3.1
Molecular weight: Translated: 6330; Mature: 6330
Theoretical pI: Translated: 9.05; Mature: 9.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDFGTIHSIYTVVLFVSFIGIVAWAYSKKRKASFDEAANLVFADEEKSSPTKQGVTK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MDFGTIHSIYTVVLFVSFIGIVAWAYSKKRKASFDEAANLVFADEEKSSPTKQGVTK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ferrocytochrome c; O2
Specific reaction: 4 ferrocytochrome c + O2 = 4 ferricytochrome c + 2 H2O
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA