| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is 37679851
Identifier: 37679851
GI number: 37679851
Start: 1720707
End: 1721924
Strand: Direct
Name: 37679851
Synonym: VV1667
Alternate gene names: NA
Gene position: 1720707-1721924 (Clockwise)
Preceding gene: 37679850
Following gene: 37679855
Centisome position: 51.3
GC content: 41.54
Gene sequence:
>1218_bases TTGCTACTCGCCAACAGACGGTATACACAAGAAGCGATTGAAACAGCGGAACAAGTGGCAAATGAGGTTAATGTTAGACA TGCCAAGTGGTTAGTGAGTATGAAATACATTCTCGATCAGTCTAACGTTGATAACCTACTTAGTTTACAAGGTCGCTATT GCGAAGACGTTATCTTTTCTGAAGATGAGCGTATCACTCGCAATCAACGCATTTTATTAGAATGTGAGCAGGCAAAAGTG GTTGAGCGGCGTGAACAGGTAAAAGCAAGACAAAATACCCATAAACGTGTCGTTGTGGATGTTACCCGCCATGCTGAGCA CATGATGATTGAGAAACTACTCAATACGCCTATAGATAAATTGTTCAATGGTATACCCAACTTTGATCATCTTGCTTCGT TTGCTTACTCACCATCCTTGAGTTTCTCCAAGTTGAGTACTTTGACAACCTTGAGTCATCAGCTTAGTTCAAGCATTTTA GATCTCGTTACAAACCCTAAATTCTGCGAACGCATAGGGAAATCATCAAAAAGTGCGACTGATGCGAAAATAGCAATAGG GCAGATGGGCATAGAAAATTGCCGTTTACTTTTCCCTGTTCTGATGGCTAGGCCGATGCTCAAATGGTCCGATGCGAATA CCAAGTTGATTGCTCCTAAAATGTGGCAACACATGATAGTCACCGCGAATGTCACTAGAATGCGCTTACAAGATGCAAAT TTCAAAGAGCCCGATGCAGGCATCTTGATTGGTGTGTTGAGAACGGTTGGTCAGTTTCTCGCATCAAACCATTTTACACA TACATTTGAAGATGCTTTAGTTGAGATGATGCTCAAATACCGTGAGCAAGATATGCGTGAAGAGTATTACGCTTGTGCAG AGGTCGTCGCCAATATGTCTTTTTTACCCAAAATTATTTTCGAACTTGAGGGACAACTTGCCAAACGAGTCTTGGAGTCC ATGGATTGGCCAGCAAATGCAATGTTTATCAAAAATGCTGTGATTGAAGATATAGACAATGTGCCTGTTGAAGAAAGAAG TATTGCAGGAGCTGCATTAGCACAAGGTCGGGCATTCTCAATCTATGATGGATTACAGCACAGCAATGCATTCGTAGAAA AACACAAACCATATTGGTTTGCTCAAGTACAAATGCCAGGAACATCGCTTAAAGATATTCAAGCAAGAATGCCCGGACGC TTAACATTGTCTATGTGA
Upstream 100 bases:
>100_bases TTCAAGATTAAATAATGGAAGCAATATCACTCTGATTTCTCATTTTTGGTCTCTATGGAATAAACTAAAACTAGTGATAA ATCTTTAAAGGGATACAGAT
Downstream 100 bases:
>100_bases TTTGTACGCAATTTCAATGGTTTGCGGTGGCTTAGCTATGTGGATTGGTAGCCCTACGGAAGCCTTAGCTAAGTGCGCAT TATGTATATTATGTTAAATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 405; Mature: 405
Protein sequence:
>405_residues MLLANRRYTQEAIETAEQVANEVNVRHAKWLVSMKYILDQSNVDNLLSLQGRYCEDVIFSEDERITRNQRILLECEQAKV VERREQVKARQNTHKRVVVDVTRHAEHMMIEKLLNTPIDKLFNGIPNFDHLASFAYSPSLSFSKLSTLTTLSHQLSSSIL DLVTNPKFCERIGKSSKSATDAKIAIGQMGIENCRLLFPVLMARPMLKWSDANTKLIAPKMWQHMIVTANVTRMRLQDAN FKEPDAGILIGVLRTVGQFLASNHFTHTFEDALVEMMLKYREQDMREEYYACAEVVANMSFLPKIIFELEGQLAKRVLES MDWPANAMFIKNAVIEDIDNVPVEERSIAGAALAQGRAFSIYDGLQHSNAFVEKHKPYWFAQVQMPGTSLKDIQARMPGR LTLSM
Sequences:
>Translated_405_residues MLLANRRYTQEAIETAEQVANEVNVRHAKWLVSMKYILDQSNVDNLLSLQGRYCEDVIFSEDERITRNQRILLECEQAKV VERREQVKARQNTHKRVVVDVTRHAEHMMIEKLLNTPIDKLFNGIPNFDHLASFAYSPSLSFSKLSTLTTLSHQLSSSIL DLVTNPKFCERIGKSSKSATDAKIAIGQMGIENCRLLFPVLMARPMLKWSDANTKLIAPKMWQHMIVTANVTRMRLQDAN FKEPDAGILIGVLRTVGQFLASNHFTHTFEDALVEMMLKYREQDMREEYYACAEVVANMSFLPKIIFELEGQLAKRVLES MDWPANAMFIKNAVIEDIDNVPVEERSIAGAALAQGRAFSIYDGLQHSNAFVEKHKPYWFAQVQMPGTSLKDIQARMPGR LTLSM >Mature_405_residues MLLANRRYTQEAIETAEQVANEVNVRHAKWLVSMKYILDQSNVDNLLSLQGRYCEDVIFSEDERITRNQRILLECEQAKV VERREQVKARQNTHKRVVVDVTRHAEHMMIEKLLNTPIDKLFNGIPNFDHLASFAYSPSLSFSKLSTLTTLSHQLSSSIL DLVTNPKFCERIGKSSKSATDAKIAIGQMGIENCRLLFPVLMARPMLKWSDANTKLIAPKMWQHMIVTANVTRMRLQDAN FKEPDAGILIGVLRTVGQFLASNHFTHTFEDALVEMMLKYREQDMREEYYACAEVVANMSFLPKIIFELEGQLAKRVLES MDWPANAMFIKNAVIEDIDNVPVEERSIAGAALAQGRAFSIYDGLQHSNAFVEKHKPYWFAQVQMPGTSLKDIQARMPGR LTLSM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46213; Mature: 46213
Theoretical pI: Translated: 7.64; Mature: 7.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLANRRYTQEAIETAEQVANEVNVRHAKWLVSMKYILDQSNVDNLLSLQGRYCEDVIFS CCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHC EDERITRNQRILLECEQAKVVERREQVKARQNTHKRVVVDVTRHAEHMMIEKLLNTPIDK CCCHHCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHCCCHHH LFNGIPNFDHLASFAYSPSLSFSKLSTLTTLSHQLSSSILDLVTNPKFCERIGKSSKSAT HHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCC DAKIAIGQMGIENCRLLFPVLMARPMLKWSDANTKLIAPKMWQHMIVTANVTRMRLQDAN CHHHHHHHCCHHHHHHHHHHHHHCCCCEECCCCCEEECHHHHHHEEEECCHHHEEECCCC FKEPDAGILIGVLRTVGQFLASNHFTHTFEDALVEMMLKYREQDMREEYYACAEVVANMS CCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FLPKIIFELEGQLAKRVLESMDWPANAMFIKNAVIEDIDNVPVEERSIAGAALAQGRAFS HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEE IYDGLQHSNAFVEKHKPYWFAQVQMPGTSLKDIQARMPGRLTLSM HHHCHHHCCHHHHCCCCEEEEEEECCCCCHHHHHHCCCCCEEECC >Mature Secondary Structure MLLANRRYTQEAIETAEQVANEVNVRHAKWLVSMKYILDQSNVDNLLSLQGRYCEDVIFS CCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHC EDERITRNQRILLECEQAKVVERREQVKARQNTHKRVVVDVTRHAEHMMIEKLLNTPIDK CCCHHCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHCCCHHH LFNGIPNFDHLASFAYSPSLSFSKLSTLTTLSHQLSSSILDLVTNPKFCERIGKSSKSAT HHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCC DAKIAIGQMGIENCRLLFPVLMARPMLKWSDANTKLIAPKMWQHMIVTANVTRMRLQDAN CHHHHHHHCCHHHHHHHHHHHHHCCCCEECCCCCEEECHHHHHHEEEECCHHHEEECCCC FKEPDAGILIGVLRTVGQFLASNHFTHTFEDALVEMMLKYREQDMREEYYACAEVVANMS CCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FLPKIIFELEGQLAKRVLESMDWPANAMFIKNAVIEDIDNVPVEERSIAGAALAQGRAFS HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEE IYDGLQHSNAFVEKHKPYWFAQVQMPGTSLKDIQARMPGRLTLSM HHHCHHHCCHHHHCCCCEEEEEEECCCCCHHHHHHCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA