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The map label for this gene is yebR [H]

Identifier: 37679829

GI number: 37679829

Start: 1695595

End: 1696068

Strand: Direct

Name: yebR [H]

Synonym: VV1645

Alternate gene names: 37679829

Gene position: 1695595-1696068 (Clockwise)

Preceding gene: 37679824

Following gene: 37679830

Centisome position: 50.55

GC content: 43.25

Gene sequence:

>474_bases
ATGACCATAGAACATTACCAAACACTCACCAAACAAGCAGTCGCACTTATTGAATCAGAGCGTGACTTAATCGCCAATCT
TTCCAACATTAGTGCGTTGCTGAACATGGGAATGTCCGATCTCAACTGGGTTGGATTTTACTTATATAAAGAAGACGAGT
TGGTTTTAGGGCCATTTCAGGGAAAAGTAGCGTGCGTGCGAATTCCTATGGGTAAGGGCGTATGCGGAACGGCAGCGCAA
ACTTATACTGTTCAACGAGTGCATGATGTGCACGAGTTTGAAGGACATATTGCCTGCGATGCGGCGAGCAATTCAGAAAT
TGTGATCCCATTCTCAATCAATGGGCAATTGGCTGGCGTTCTGGATATTGATAGCCCAAGTATAGGTAGATTTAGTGAAA
TTGATGAACAAGGGTTAACATTTTTCATGGCAGAAGTAGAAAAGCTGCTTAATTCACACGCGAACAACGCATAA

Upstream 100 bases:

>100_bases
TAGAGTCAGCATTCTAGCGGCTGTTGATTCTATTCCAAAGTAAATTCAGGAAATTATTAATGCACGCTTCAGCTGTGCAA
TAAACAATTGGAAGCTTTAT

Downstream 100 bases:

>100_bases
ATTGGGTAACGAGAGTGGTTTTTCGCCCGCATCTCTCTATAATACGAGAATATTTTTATCTTAATGCTCGCGGGCAGGCC
GCTCAAACCAGGACAACTCA

Product: GAF domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 157; Mature: 156

Protein sequence:

>157_residues
MTIEHYQTLTKQAVALIESERDLIANLSNISALLNMGMSDLNWVGFYLYKEDELVLGPFQGKVACVRIPMGKGVCGTAAQ
TYTVQRVHDVHEFEGHIACDAASNSEIVIPFSINGQLAGVLDIDSPSIGRFSEIDEQGLTFFMAEVEKLLNSHANNA

Sequences:

>Translated_157_residues
MTIEHYQTLTKQAVALIESERDLIANLSNISALLNMGMSDLNWVGFYLYKEDELVLGPFQGKVACVRIPMGKGVCGTAAQ
TYTVQRVHDVHEFEGHIACDAASNSEIVIPFSINGQLAGVLDIDSPSIGRFSEIDEQGLTFFMAEVEKLLNSHANNA
>Mature_156_residues
TIEHYQTLTKQAVALIESERDLIANLSNISALLNMGMSDLNWVGFYLYKEDELVLGPFQGKVACVRIPMGKGVCGTAAQT
YTVQRVHDVHEFEGHIACDAASNSEIVIPFSINGQLAGVLDIDSPSIGRFSEIDEQGLTFFMAEVEKLLNSHANNA

Specific function: Unknown

COG id: COG1956

COG function: function code T; GAF domain-containing protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the free Met sulfoxide reductase family [H]

Homologues:

Organism=Escherichia coli, GI171474009, Length=147, Percent_Identity=57.8231292517007, Blast_Score=183, Evalue=4e-48,
Organism=Saccharomyces cerevisiae, GI6322781, Length=145, Percent_Identity=44.1379310344828, Blast_Score=117, Evalue=7e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003018
- InterPro:   IPR000614 [H]

Pfam domain/function: PF01590 GAF [H]

EC number: NA

Molecular weight: Translated: 17177; Mature: 17046

Theoretical pI: Translated: 4.40; Mature: 4.40

Prosite motif: PS01320 UPF0067

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIEHYQTLTKQAVALIESERDLIANLSNISALLNMGMSDLNWVGFYLYKEDELVLGPFQ
CCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCEEECCCC
GKVACVRIPMGKGVCGTAAQTYTVQRVHDVHEFEGHIACDAASNSEIVIPFSINGQLAGV
CCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEEECCCEEEEE
LDIDSPSIGRFSEIDEQGLTFFMAEVEKLLNSHANNA
EECCCCCCCCCHHHHHCCHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TIEHYQTLTKQAVALIESERDLIANLSNISALLNMGMSDLNWVGFYLYKEDELVLGPFQ
CCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCEEECCCC
GKVACVRIPMGKGVCGTAAQTYTVQRVHDVHEFEGHIACDAASNSEIVIPFSINGQLAGV
CCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEEECCCEEEEE
LDIDSPSIGRFSEIDEQGLTFFMAEVEKLLNSHANNA
EECCCCCCCCCHHHHHCCHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503; 10493123 [H]