The gene/protein map for NC_005139 is currently unavailable.
Definition Vibrio vulnificus YJ016 chromosome I, complete sequence.
Accession NC_005139
Length 3,354,505

Click here to switch to the map view.

The map label for this gene is 37679778

Identifier: 37679778

GI number: 37679778

Start: 1637072

End: 1637635

Strand: Direct

Name: 37679778

Synonym: VV1594

Alternate gene names: NA

Gene position: 1637072-1637635 (Clockwise)

Preceding gene: 37679777

Following gene: 37679780

Centisome position: 48.8

GC content: 45.21

Gene sequence:

>564_bases
ATGCGTTTACTCACCAGTGTTTCTTTGGTATCGGTGATCTTTCTAAGTGGCTTTGCTGCCTTTGTCGCTTTGAAAACGGT
GCCTCAGTTAAATTTTGCGTCGAAAGGTATGGACTGGCAGTGGCATTGGGCGTATTTCCTGCCATTCTCGAATGGCATTC
AACAGACTCGGACTCAAGACACCAAACAATTGCTATTGAGGCGAGTCTATTTGGAAGATGACATTGCGGTTTTTGTTTCA
ACCACGTTGGACAACAAGTTCGAAATTGACGTGTTTAAAGCGGCTAAGTGTAATGCGAGTTCTAGTGAGTGGGCCTCGGT
TTCGGTAAATGGTGCGCCTATGACGCACGTCCCGTTGAAGTGTGAGGCTAGTGGTGACGGTTATCTCTTTCGCCATGTTG
GGAACAAGTTGAAGTCCTTGGAATTTGGCTTTGAAGATGACTTCATTATCGAAAGCTTTGCACAATGGCCGATTAACGAA
ATCAAAGCGGATCAATTTAAACAGCAACATCCGACGTTTTTCAAAAAGCAGGGCGTTGAGGTGGAGCAGTGGCTAAGAGA
TTAA

Upstream 100 bases:

>100_bases
ATCTTTTGAAAAATGCGCAGTTCATGAAATGGATGGAAGGTGCAACAGGGGCCGTTTTGGTGGCTCTTGGAATTAAACTT
TTGGTTGAAAAGCCAGTCTG

Downstream 100 bases:

>100_bases
ACAGACAAGATTGTGCTTGAGAGCATCTATCCACAACAGTAATAAAAACGCCCGCGATCACGAAGTGACAGCGGGCGTTT
TTGTGTTAGAACTTAACGAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MRLLTSVSLVSVIFLSGFAAFVALKTVPQLNFASKGMDWQWHWAYFLPFSNGIQQTRTQDTKQLLLRRVYLEDDIAVFVS
TTLDNKFEIDVFKAAKCNASSSEWASVSVNGAPMTHVPLKCEASGDGYLFRHVGNKLKSLEFGFEDDFIIESFAQWPINE
IKADQFKQQHPTFFKKQGVEVEQWLRD

Sequences:

>Translated_187_residues
MRLLTSVSLVSVIFLSGFAAFVALKTVPQLNFASKGMDWQWHWAYFLPFSNGIQQTRTQDTKQLLLRRVYLEDDIAVFVS
TTLDNKFEIDVFKAAKCNASSSEWASVSVNGAPMTHVPLKCEASGDGYLFRHVGNKLKSLEFGFEDDFIIESFAQWPINE
IKADQFKQQHPTFFKKQGVEVEQWLRD
>Mature_187_residues
MRLLTSVSLVSVIFLSGFAAFVALKTVPQLNFASKGMDWQWHWAYFLPFSNGIQQTRTQDTKQLLLRRVYLEDDIAVFVS
TTLDNKFEIDVFKAAKCNASSSEWASVSVNGAPMTHVPLKCEASGDGYLFRHVGNKLKSLEFGFEDDFIIESFAQWPINE
IKADQFKQQHPTFFKKQGVEVEQWLRD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21396; Mature: 21396

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLLTSVSLVSVIFLSGFAAFVALKTVPQLNFASKGMDWQWHWAYFLPFSNGIQQTRTQD
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEECCCCHHHHHHHH
TKQLLLRRVYLEDDIAVFVSTTLDNKFEIDVFKAAKCNASSSEWASVSVNGAPMTHVPLK
HHHHHHHHHHHCCCEEEEEEECCCCEEEEEEEEEECCCCCCCCCEEEEECCCCCEECCEE
CEASGDGYLFRHVGNKLKSLEFGFEDDFIIESFAQWPINEIKADQFKQQHPTFFKKQGVE
EECCCCCEEHHHHCCHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCHHHHCCCC
VEQWLRD
HHHHHCC
>Mature Secondary Structure
MRLLTSVSLVSVIFLSGFAAFVALKTVPQLNFASKGMDWQWHWAYFLPFSNGIQQTRTQD
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEECCCCHHHHHHHH
TKQLLLRRVYLEDDIAVFVSTTLDNKFEIDVFKAAKCNASSSEWASVSVNGAPMTHVPLK
HHHHHHHHHHHCCCEEEEEEECCCCEEEEEEEEEECCCCCCCCCEEEEECCCCCEECCEE
CEASGDGYLFRHVGNKLKSLEFGFEDDFIIESFAQWPINEIKADQFKQQHPTFFKKQGVE
EECCCCCEEHHHHCCHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCHHHHCCCC
VEQWLRD
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA