| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is 37679755
Identifier: 37679755
GI number: 37679755
Start: 1614595
End: 1616082
Strand: Direct
Name: 37679755
Synonym: VV1571
Alternate gene names: NA
Gene position: 1614595-1616082 (Clockwise)
Preceding gene: 37679754
Following gene: 37679756
Centisome position: 48.13
GC content: 48.79
Gene sequence:
>1488_bases ATGGACACTATTTTTCTCGGAATCAATGAAATACTCACCATGCAAGTCGTACTCGCCATTGTGTTTGGGGCGATTCTTGG TGTGTCGATAGGCTCTATCCCAGGGCTGGAACCCGCAGGCGTAATGGCGATTTTGTTGCCAATGACGTTTAACTTTGACC CGTTGCCAGCGGTCACTTTACTGCTCGGAGTATACGGCGGCGCTTGGTATGGCGGTGCGATCCCCGCAATATTAATGAAT ACTCCCGGCACGCCCGTTGCAGTGCTGACAACTTATGACGGCTACCCGATGACACAAAAAGGCGAGGGTAAGCGAGCGCT GTCTATTGCGTACTCGTCGTCTTTCTTCGGTGGCATGGTAAGCGTGCTGTCTCTGGTTCTTTTGGCGCCTCTTCTATCAC AAATCGCGATGCACTTTGGCTCGGCCGAGTTTGCCATGTTAGCCGCGCTTGGGATGATCTTTGTGGTTATGGCTCACTAC AAACAAGCATTTGCAGCGGCGATGATGCTTGGTCTAGGAATTTTTCTCGGTACGATCGGCATTGACCGCTCATACAACAC CATGACGTACACCTTTAACCAAGAGTGGCTATTCGGTGGTGTGCCACTGGTGCCAACGGTGATTGGTCTCTTTGCAATGT CTCAAGCGTTTGTTTTGCTATCGCAGAAAGGCAACGACTCGCAAGTCACGACTTATGAAGGCAAAGGGCGCTTCTCTGGA ATGCTGGTGGTGATCAAGCATAAATGGACCGCAGTTCGTTCAGCAATGTTAGGTGTCATCATGGGATTGCTACCGGGTGT GGGCGAGTTTGGTTCGCAGTTCTTCTCTTATACTTTGGCACAGAAACTCTCCAAAAACCCAGATAAGTTTGGTCAAGGCG CAGAAGAGGGCTTGATTGCCTCTGAAACATCGAACAACGCGGTGACGGCTTCAGTCATGGTCCCACTGTTGGCATTTGGT ATTCCTGCCGACGCCTTGATGGCTATGTTGTTGTCTGTATTTATGGTGCACAACTACACGCCGGGTCCAACCTTATTTGC TGAGCGACCAGAGTTCATTTCTGGCTTATACATCTCGCTGTTTTTAATCAACATTGTCGCATTCATCTACCTGACTTTTA GTAGCAAATGGATAGCTAACCTAACGCGCATTCGCGGACGCTTTATCGGTGCACTGATACTGGTACTCGGTTTTATCGGA AGCTATAGCCAAAACTACCAATTCTCTGATGCGCTTATCGCTCTTGGCTTTGCTGTGTTTGGTTACATTCTCAAACGCGA GCAGATCCCAGCGGTGCCAATCATCTTAGGTTTGGTACTTGGTCCGGTGTTTCTCGCCCGAACCAAGCAAGCACTCGGAG TATCAAATGGCGGCGTCTCAATCTTTTGGGACAGACCAATCAGCCTCGCTTTGCTGAGCATGATCGTCATTTCTATTGGC ATCTTTGTTTACAGCATGGTTAGAGATAATCAAACAAAAACACAATAA
Upstream 100 bases:
>100_bases TTGCGTTGTGGTTGCCGGATGTGTGGCTGTTCTCGTTCCTTCCCGACCAAATGGCTGACTTTGCCAATAGGTATTTGTAG TAATTGGATGTTGTATCGAT
Downstream 100 bases:
>100_bases CGAACGTCGAAACAAAAGGAACTCACAATGAACCAATTTGGAATGACTATTGATGGTCAAACCGTACAAGGTGAAATGCC GTCAAGCATCGTGCTCAACC
Product: hypothetical protein
Products: NA
Alternate protein names: ORFZ2 [H]
Number of amino acids: Translated: 495; Mature: 495
Protein sequence:
>495_residues MDTIFLGINEILTMQVVLAIVFGAILGVSIGSIPGLEPAGVMAILLPMTFNFDPLPAVTLLLGVYGGAWYGGAIPAILMN TPGTPVAVLTTYDGYPMTQKGEGKRALSIAYSSSFFGGMVSVLSLVLLAPLLSQIAMHFGSAEFAMLAALGMIFVVMAHY KQAFAAAMMLGLGIFLGTIGIDRSYNTMTYTFNQEWLFGGVPLVPTVIGLFAMSQAFVLLSQKGNDSQVTTYEGKGRFSG MLVVIKHKWTAVRSAMLGVIMGLLPGVGEFGSQFFSYTLAQKLSKNPDKFGQGAEEGLIASETSNNAVTASVMVPLLAFG IPADALMAMLLSVFMVHNYTPGPTLFAERPEFISGLYISLFLINIVAFIYLTFSSKWIANLTRIRGRFIGALILVLGFIG SYSQNYQFSDALIALGFAVFGYILKREQIPAVPIILGLVLGPVFLARTKQALGVSNGGVSIFWDRPISLALLSMIVISIG IFVYSMVRDNQTKTQ
Sequences:
>Translated_495_residues MDTIFLGINEILTMQVVLAIVFGAILGVSIGSIPGLEPAGVMAILLPMTFNFDPLPAVTLLLGVYGGAWYGGAIPAILMN TPGTPVAVLTTYDGYPMTQKGEGKRALSIAYSSSFFGGMVSVLSLVLLAPLLSQIAMHFGSAEFAMLAALGMIFVVMAHY KQAFAAAMMLGLGIFLGTIGIDRSYNTMTYTFNQEWLFGGVPLVPTVIGLFAMSQAFVLLSQKGNDSQVTTYEGKGRFSG MLVVIKHKWTAVRSAMLGVIMGLLPGVGEFGSQFFSYTLAQKLSKNPDKFGQGAEEGLIASETSNNAVTASVMVPLLAFG IPADALMAMLLSVFMVHNYTPGPTLFAERPEFISGLYISLFLINIVAFIYLTFSSKWIANLTRIRGRFIGALILVLGFIG SYSQNYQFSDALIALGFAVFGYILKREQIPAVPIILGLVLGPVFLARTKQALGVSNGGVSIFWDRPISLALLSMIVISIG IFVYSMVRDNQTKTQ >Mature_495_residues MDTIFLGINEILTMQVVLAIVFGAILGVSIGSIPGLEPAGVMAILLPMTFNFDPLPAVTLLLGVYGGAWYGGAIPAILMN TPGTPVAVLTTYDGYPMTQKGEGKRALSIAYSSSFFGGMVSVLSLVLLAPLLSQIAMHFGSAEFAMLAALGMIFVVMAHY KQAFAAAMMLGLGIFLGTIGIDRSYNTMTYTFNQEWLFGGVPLVPTVIGLFAMSQAFVLLSQKGNDSQVTTYEGKGRFSG MLVVIKHKWTAVRSAMLGVIMGLLPGVGEFGSQFFSYTLAQKLSKNPDKFGQGAEEGLIASETSNNAVTASVMVPLLAFG IPADALMAMLLSVFMVHNYTPGPTLFAERPEFISGLYISLFLINIVAFIYLTFSSKWIANLTRIRGRFIGALILVLGFIG SYSQNYQFSDALIALGFAVFGYILKREQIPAVPIILGLVLGPVFLARTKQALGVSNGGVSIFWDRPISLALLSMIVISIG IFVYSMVRDNQTKTQ
Specific function: Unknown
COG id: COG3333
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002823 [H]
Pfam domain/function: PF01970 DUF112 [H]
EC number: NA
Molecular weight: Translated: 53086; Mature: 53086
Theoretical pI: Translated: 9.19; Mature: 9.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTIFLGINEILTMQVVLAIVFGAILGVSIGSIPGLEPAGVMAILLPMTFNFDPLPAVTL CCEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHHH LLGVYGGAWYGGAIPAILMNTPGTPVAVLTTYDGYPMTQKGEGKRALSIAYSSSFFGGMV HHHHHCCCHHCCCCCEEEECCCCCCEEEEEECCCCCCCCCCCCCEEEEEEEHHHHHHHHH SVLSLVLLAPLLSQIAMHFGSAEFAMLAALGMIFVVMAHYKQAFAAAMMLGLGIFLGTIG HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC IDRSYNTMTYTFNQEWLFGGVPLVPTVIGLFAMSQAFVLLSQKGNDSQVTTYEGKGRFSG CCCCCCEEEEEECCCEEECCCCHHHHHHHHHHHHHHHHHEECCCCCCCEEEECCCCCCCC MLVVIKHKWTAVRSAMLGVIMGLLPGVGEFGSQFFSYTLAQKLSKNPDKFGQGAEEGLIA EEEEEECHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCEEE SETSNNAVTASVMVPLLAFGIPADALMAMLLSVFMVHNYTPGPTLFAERPEFISGLYISL ECCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH FLINIVAFIYLTFSSKWIANLTRIRGRFIGALILVLGFIGSYSQNYQFSDALIALGFAVF HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH GYILKREQIPAVPIILGLVLGPVFLARTKQALGVSNGGVSIFWDRPISLALLSMIVISIG HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHH IFVYSMVRDNQTKTQ HHHHHHHHCCCCCCC >Mature Secondary Structure MDTIFLGINEILTMQVVLAIVFGAILGVSIGSIPGLEPAGVMAILLPMTFNFDPLPAVTL CCEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHHH LLGVYGGAWYGGAIPAILMNTPGTPVAVLTTYDGYPMTQKGEGKRALSIAYSSSFFGGMV HHHHHCCCHHCCCCCEEEECCCCCCEEEEEECCCCCCCCCCCCCEEEEEEEHHHHHHHHH SVLSLVLLAPLLSQIAMHFGSAEFAMLAALGMIFVVMAHYKQAFAAAMMLGLGIFLGTIG HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC IDRSYNTMTYTFNQEWLFGGVPLVPTVIGLFAMSQAFVLLSQKGNDSQVTTYEGKGRFSG CCCCCCEEEEEECCCEEECCCCHHHHHHHHHHHHHHHHHEECCCCCCCEEEECCCCCCCC MLVVIKHKWTAVRSAMLGVIMGLLPGVGEFGSQFFSYTLAQKLSKNPDKFGQGAEEGLIA EEEEEECHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCEEE SETSNNAVTASVMVPLLAFGIPADALMAMLLSVFMVHNYTPGPTLFAERPEFISGLYISL ECCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH FLINIVAFIYLTFSSKWIANLTRIRGRFIGALILVLGFIGSYSQNYQFSDALIALGFAVF HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH GYILKREQIPAVPIILGLVLGPVFLARTKQALGVSNGGVSIFWDRPISLALLSMIVISIG HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHH IFVYSMVRDNQTKTQ HHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8672817 [H]