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The map label for this gene is napH

Identifier: 37679744

GI number: 37679744

Start: 1606496

End: 1607350

Strand: Direct

Name: napH

Synonym: VV1560

Alternate gene names: 37679744

Gene position: 1606496-1607350 (Clockwise)

Preceding gene: 37679743

Following gene: 37679747

Centisome position: 47.89

GC content: 47.49

Gene sequence:

>855_bases
ATGGCGAAGAATTTAGCAAAAGATGCAGGTCGTGAAGCAAGACAGAAGTTAGGTTGGTGGCATGCTCACCGTTTCCTTAT
CTTAAGACGTTTGGCTCAGTTCTCCATTATTGGTCTGTTTTTACTCAGCCCAACGGTAAACATACTTAAAGGCAACCTTT
CATCGAGTATGTTGTTTGACACCATTCCACTGACTGACCCTCTGATTTTCTTACAAATTGTCGCTTCTGGGCATATTCCA
GAATTCAATGCGTTGCTCGGCGTTCTGATTGTCGTCGTGTTTTACGCCATCATCAGCCCTAGAGCATTTTGTGCATGGGT
GTGCCCGCTTAATGTGGTTACAGATCTTGCAGCTTGGTTAAAGCGTAAGCTGGAAATCAAGGCGAGCTTTCGTTGGAACG
CTCAACTGAGATATTGGCTCCTGGGCGCACTGCTTATTGGCAGCGCAGCTTCAGGCAGTGTGCTTTGGGCTTGGATTGAT
CCTGTCGCCACGCTGCATCGAGGCATTCTTTTTGGAATGGGCGCTGGCTGGGTGCTGATCCTGTTGGTATTTGTGCTTGA
TCTTCTGCTGGTCGATCATGGTTGGTGCGGCCATCTGTGCCCACTCGGTGCAACTTATGGCGTGATTGGACGAAAAAGTG
TTCTGAGAATCTCAGCGGAAAATCGAGAAGCGTGCACCAAGTGTATGGATTGCTACAATATTTGCCCAGAGCCAGAGGTA
TTGCGGCAACCACTAAAAGAAGGGGACAGAAGAGTCATGGATCAAAACTGCATCAGTTGTGGACGTTGTATTGATGTTTG
TCCCGAGAACGTGCTGGTATTTACACATCGCTTCAAAGACAAAGATAAGGCGTAA

Upstream 100 bases:

>100_bases
AGCTTGGATGGGAGGAGATTACCAAGCCTTTGCAAAACACCGCCCCAGATACCAGTGATATGCCAACTGGCGCGTTGGAA
ACCTTGGGAGGATCAAAATA

Downstream 100 bases:

>100_bases
CGTTCGTAACGCTAAAACAATCCTGCCGTTAATAATAATGAGCCCATCCTAATTGATGGGCTCATTATTTTCACATTAAG
CGTTGGCTTGATTTCTCGGT

Product: quinol dehydrogenase membrane component

Products: reduced acceptor; NO3- [C]

Alternate protein names: NA

Number of amino acids: Translated: 284; Mature: 283

Protein sequence:

>284_residues
MAKNLAKDAGREARQKLGWWHAHRFLILRRLAQFSIIGLFLLSPTVNILKGNLSSSMLFDTIPLTDPLIFLQIVASGHIP
EFNALLGVLIVVVFYAIISPRAFCAWVCPLNVVTDLAAWLKRKLEIKASFRWNAQLRYWLLGALLIGSAASGSVLWAWID
PVATLHRGILFGMGAGWVLILLVFVLDLLLVDHGWCGHLCPLGATYGVIGRKSVLRISAENREACTKCMDCYNICPEPEV
LRQPLKEGDRRVMDQNCISCGRCIDVCPENVLVFTHRFKDKDKA

Sequences:

>Translated_284_residues
MAKNLAKDAGREARQKLGWWHAHRFLILRRLAQFSIIGLFLLSPTVNILKGNLSSSMLFDTIPLTDPLIFLQIVASGHIP
EFNALLGVLIVVVFYAIISPRAFCAWVCPLNVVTDLAAWLKRKLEIKASFRWNAQLRYWLLGALLIGSAASGSVLWAWID
PVATLHRGILFGMGAGWVLILLVFVLDLLLVDHGWCGHLCPLGATYGVIGRKSVLRISAENREACTKCMDCYNICPEPEV
LRQPLKEGDRRVMDQNCISCGRCIDVCPENVLVFTHRFKDKDKA
>Mature_283_residues
AKNLAKDAGREARQKLGWWHAHRFLILRRLAQFSIIGLFLLSPTVNILKGNLSSSMLFDTIPLTDPLIFLQIVASGHIPE
FNALLGVLIVVVFYAIISPRAFCAWVCPLNVVTDLAAWLKRKLEIKASFRWNAQLRYWLLGALLIGSAASGSVLWAWIDP
VATLHRGILFGMGAGWVLILLVFVLDLLLVDHGWCGHLCPLGATYGVIGRKSVLRISAENREACTKCMDCYNICPEPEVL
RQPLKEGDRRVMDQNCISCGRCIDVCPENVLVFTHRFKDKDKA

Specific function: Involved in electron transfer [H]

COG id: COG0348

COG function: function code C; Polyferredoxin

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI1788532, Length=285, Percent_Identity=50.5263157894737, Blast_Score=301, Evalue=4e-83,
Organism=Escherichia coli, GI1787226, Length=224, Percent_Identity=27.6785714285714, Blast_Score=71, Evalue=6e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR011886 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31767; Mature: 31636

Theoretical pI: Translated: 8.81; Mature: 8.81

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
4.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKNLAKDAGREARQKLGWWHAHRFLILRRLAQFSIIGLFLLSPTVNILKGNLSSSMLFD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHH
TIPLTDPLIFLQIVASGHIPEFNALLGVLIVVVFYAIISPRAFCAWVCPLNVVTDLAAWL
CCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
KRKLEIKASFRWNAQLRYWLLGALLIGSAASGSVLWAWIDPVATLHRGILFGMGAGWVLI
HHHHHHEEEEEECCHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHCCHHHHHH
LLVFVLDLLLVDHGWCGHLCPLGATYGVIGRKSVLRISAENREACTKCMDCYNICPEPEV
HHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCEEEEECCCHHHHHHHHHHHHCCCCHHH
LRQPLKEGDRRVMDQNCISCGRCIDVCPENVLVFTHRFKDKDKA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCC
>Mature Secondary Structure 
AKNLAKDAGREARQKLGWWHAHRFLILRRLAQFSIIGLFLLSPTVNILKGNLSSSMLFD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHH
TIPLTDPLIFLQIVASGHIPEFNALLGVLIVVVFYAIISPRAFCAWVCPLNVVTDLAAWL
CCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
KRKLEIKASFRWNAQLRYWLLGALLIGSAASGSVLWAWIDPVATLHRGILFGMGAGWVLI
HHHHHHEEEEEECCHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHCCHHHHHH
LLVFVLDLLLVDHGWCGHLCPLGATYGVIGRKSVLRISAENREACTKCMDCYNICPEPEV
HHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCEEEEECCCHHHHHHHHHHHHCCCCHHH
LRQPLKEGDRRVMDQNCISCGRCIDVCPENVLVFTHRFKDKDKA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Acceptor; nitrite [C]

Specific reaction: Acceptor + nitrite = reduced acceptor + NO3- [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]