The gene/protein map for NC_002944 is currently unavailable.
Definition Vibrio vulnificus YJ016 chromosome I, complete sequence.
Accession NC_005139
Length 3,354,505

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The map label for this gene is napG

Identifier: 37679743

GI number: 37679743

Start: 1605591

End: 1606496

Strand: Direct

Name: napG

Synonym: VV1559

Alternate gene names: 37679743

Gene position: 1605591-1606496 (Clockwise)

Preceding gene: 37679742

Following gene: 37679744

Centisome position: 47.86

GC content: 50.77

Gene sequence:

>906_bases
GTGTTTGATTACCCTTTTGGGGTGATAGAAAACGAACGCCATCCAGTTACATTACGCTTATATCTTCAGCGATTTTGTGC
GCGGACAACTAGTATAAAACAAGTGCGACACATGAAGGCGATAGGTGAAGCAATGAGTGTAAGCAACAGCAAAAAAACAT
CCGAAAGTCGAAGACGATTTCTTCGCGATTCCGTTAGAACATTTGCCGGCGTTGGCGCAGCGGCCACCGTTCTCGGCCTG
CAATCTAAGCAAAGCCAGGCTCGTGGTGGTACTGGCGTTCCACTTCGCCCGCCAGGTGCCTTACCCAAAGGGGAGTTTGA
AAAAGCCTGCACCCGTTGTGGTTTGTGTGTTCAGGCATGTCCGTATGATACCTTGAAGCTGGCGACGTTACTCTCCCCAG
TGGAGTCGGGCACACCTTATTTTCATGCTCGGGAGATCCCATGTGAAATGTGTGAAGACATTCCTTGCGTGGCCGCCTGC
CCAAGTGGAGCGCTTGATCCGAATCTCACGGATATTGATGACGCTCGTATGGGGTTAGCAGTCTTAATTGACCATGAAAG
CTGCTTGAACTGGCAGGGATTGCGCTGTGATGTCTGCTACCGAGTTTGCCCTGTTATCGACGAGGCCATTACGCTGGAGC
ACGTTCGAAATGAAAGAACCGGTTATCACGCGAAGTTGATCCCGACCGTGCATTCGGATAAATGCACTGGCTGCGGTAAA
TGTGAGCAGGCGTGCATTACCGAAGTCGCTGCGATCAAAGTCATTCCGCATGATCTCGCCCAAGGAAAAATAGGCGACCA
TTACCAGCTTGGATGGGAGGAGATTACCAAGCCTTTGCAAAACACCGCCCCAGATACCAGTGATATGCCAACTGGCGCGT
TGGAAACCTTGGGAGGATCAAAATAA

Upstream 100 bases:

>100_bases
CCTTCACCCGCTTTAATGCTCGCGGCTTCCATCTTTAGCGGACAAAAATCGTGAGCTTAGTGTCAGAGTTGAATAATGAC
GTTTGATCTAACTCAATCAA

Downstream 100 bases:

>100_bases
TGGCGAAGAATTTAGCAAAAGATGCAGGTCGTGAAGCAAGACAGAAGTTAGGTTGGTGGCATGCTCACCGTTTCCTTATC
TTAAGACGTTTGGCTCAGTT

Product: quinol dehydrogenase periplasmic component

Products: reduced acceptor; NO3- [C]

Alternate protein names: NA

Number of amino acids: Translated: 301; Mature: 301

Protein sequence:

>301_residues
MFDYPFGVIENERHPVTLRLYLQRFCARTTSIKQVRHMKAIGEAMSVSNSKKTSESRRRFLRDSVRTFAGVGAAATVLGL
QSKQSQARGGTGVPLRPPGALPKGEFEKACTRCGLCVQACPYDTLKLATLLSPVESGTPYFHAREIPCEMCEDIPCVAAC
PSGALDPNLTDIDDARMGLAVLIDHESCLNWQGLRCDVCYRVCPVIDEAITLEHVRNERTGYHAKLIPTVHSDKCTGCGK
CEQACITEVAAIKVIPHDLAQGKIGDHYQLGWEEITKPLQNTAPDTSDMPTGALETLGGSK

Sequences:

>Translated_301_residues
MFDYPFGVIENERHPVTLRLYLQRFCARTTSIKQVRHMKAIGEAMSVSNSKKTSESRRRFLRDSVRTFAGVGAAATVLGL
QSKQSQARGGTGVPLRPPGALPKGEFEKACTRCGLCVQACPYDTLKLATLLSPVESGTPYFHAREIPCEMCEDIPCVAAC
PSGALDPNLTDIDDARMGLAVLIDHESCLNWQGLRCDVCYRVCPVIDEAITLEHVRNERTGYHAKLIPTVHSDKCTGCGK
CEQACITEVAAIKVIPHDLAQGKIGDHYQLGWEEITKPLQNTAPDTSDMPTGALETLGGSK
>Mature_301_residues
MFDYPFGVIENERHPVTLRLYLQRFCARTTSIKQVRHMKAIGEAMSVSNSKKTSESRRRFLRDSVRTFAGVGAAATVLGL
QSKQSQARGGTGVPLRPPGALPKGEFEKACTRCGLCVQACPYDTLKLATLLSPVESGTPYFHAREIPCEMCEDIPCVAAC
PSGALDPNLTDIDDARMGLAVLIDHESCLNWQGLRCDVCYRVCPVIDEAITLEHVRNERTGYHAKLIPTVHSDKCTGCGK
CEQACITEVAAIKVIPHDLAQGKIGDHYQLGWEEITKPLQNTAPDTSDMPTGALETLGGSK

Specific function: Involved in electron transfer [H]

COG id: COG1145

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 4 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI1788533, Length=228, Percent_Identity=64.9122807017544, Blast_Score=310, Evalue=9e-86,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR004494
- InterPro:   IPR006311 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32820; Mature: 32820

Theoretical pI: Translated: 7.13; Mature: 7.13

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
7.6 %Cys+Met (Translated Protein)
5.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
7.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFDYPFGVIENERHPVTLRLYLQRFCARTTSIKQVRHMKAIGEAMSVSNSKKTSESRRRF
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
LRDSVRTFAGVGAAATVLGLQSKQSQARGGTGVPLRPPGALPKGEFEKACTRCGLCVQAC
HHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHCC
PYDTLKLATLLSPVESGTPYFHAREIPCEMCEDIPCVAACPSGALDPNLTDIDDARMGLA
CCHHHHHHHHHHHHHCCCCCEECCCCCHHHHCCCCCEEECCCCCCCCCCCCCCHHHCCEE
VLIDHESCLNWQGLRCDVCYRVCPVIDEAITLEHVRNERTGYHAKLIPTVHSDKCTGCGK
EEEECHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCH
CEQACITEVAAIKVIPHDLAQGKIGDHYQLGWEEITKPLQNTAPDTSDMPTGALETLGGS
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHCCCC
K
C
>Mature Secondary Structure
MFDYPFGVIENERHPVTLRLYLQRFCARTTSIKQVRHMKAIGEAMSVSNSKKTSESRRRF
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
LRDSVRTFAGVGAAATVLGLQSKQSQARGGTGVPLRPPGALPKGEFEKACTRCGLCVQAC
HHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHCC
PYDTLKLATLLSPVESGTPYFHAREIPCEMCEDIPCVAACPSGALDPNLTDIDDARMGLA
CCHHHHHHHHHHHHHCCCCCEECCCCCHHHHCCCCCEEECCCCCCCCCCCCCCHHHCCEE
VLIDHESCLNWQGLRCDVCYRVCPVIDEAITLEHVRNERTGYHAKLIPTVHSDKCTGCGK
EEEECHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCH
CEQACITEVAAIKVIPHDLAQGKIGDHYQLGWEEITKPLQNTAPDTSDMPTGALETLGGS
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHCCCC
K
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Acceptor; nitrite [C]

Specific reaction: Acceptor + nitrite = reduced acceptor + NO3- [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]