| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is 37679736
Identifier: 37679736
GI number: 37679736
Start: 1598514
End: 1598888
Strand: Direct
Name: 37679736
Synonym: VV1552
Alternate gene names: NA
Gene position: 1598514-1598888 (Clockwise)
Preceding gene: 37679734
Following gene: 37679742
Centisome position: 47.65
GC content: 44.0
Gene sequence:
>375_bases ATGTCAAAACAGCGTTACATTGAAATTAATGACAACGAGAAATCTATTTGGTCTATTGAGCGCATTTGGGCACTTGCTGA ATCACTTCCTGTAGAGGAGCTCCCCATTGATGAGATAAAAGGGCCAGATGAAGTGACTTGGTTTAGCATGGAAGGGCCTA TGCCTACATGTCGAGAGATAGCAAAGCACTGCCAAAGAATTAACAACGCTGACTTGTCGTACCCTGTGATTTTAACCAGC GATTACAAAGTCTTTGATGGTATGCATCGAATTGCTAAGAAAATCATGTTGGGAGAGGAGACCATTCAAGTGAGGCGCTT TAGAGAAAACCCGCCTGCGGATGAAGTGATTGTTCTTGCGGTCGATCAAGCCTAG
Upstream 100 bases:
>100_bases GCTTACTTCGTTGTGTTTGTAATAGTGGGTCGCTATTCTTCTGTTTTTGTTATAAATTTCATTCGATATTATAAATGGAA ATCATGACAAGGAGTCAGTC
Downstream 100 bases:
>100_bases ATTTCCTATCGCAGACCAAGAAAAAGCCCGAAGCAATGCTCCGGGCTTTGAATTGATTTAACGCTAAACAATTAGTCGTC GTTCATAATGCCGAGAATAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 124; Mature: 123
Protein sequence:
>124_residues MSKQRYIEINDNEKSIWSIERIWALAESLPVEELPIDEIKGPDEVTWFSMEGPMPTCREIAKHCQRINNADLSYPVILTS DYKVFDGMHRIAKKIMLGEETIQVRRFRENPPADEVIVLAVDQA
Sequences:
>Translated_124_residues MSKQRYIEINDNEKSIWSIERIWALAESLPVEELPIDEIKGPDEVTWFSMEGPMPTCREIAKHCQRINNADLSYPVILTS DYKVFDGMHRIAKKIMLGEETIQVRRFRENPPADEVIVLAVDQA >Mature_123_residues SKQRYIEINDNEKSIWSIERIWALAESLPVEELPIDEIKGPDEVTWFSMEGPMPTCREIAKHCQRINNADLSYPVILTSD YKVFDGMHRIAKKIMLGEETIQVRRFRENPPADEVIVLAVDQA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14360; Mature: 14228
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKQRYIEINDNEKSIWSIERIWALAESLPVEELPIDEIKGPDEVTWFSMEGPMPTCREI CCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCEEEEEECCCCHHHHHH AKHCQRINNADLSYPVILTSDYKVFDGMHRIAKKIMLGEETIQVRRFRENPPADEVIVLA HHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCEEEEE VDQA ECCC >Mature Secondary Structure SKQRYIEINDNEKSIWSIERIWALAESLPVEELPIDEIKGPDEVTWFSMEGPMPTCREI CCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCEEEEEECCCCHHHHHH AKHCQRINNADLSYPVILTSDYKVFDGMHRIAKKIMLGEETIQVRRFRENPPADEVIVLA HHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCEEEEE VDQA ECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA