Definition Vibrio vulnificus YJ016 chromosome I, complete sequence.
Accession NC_005139
Length 3,354,505

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The map label for this gene is 37679616

Identifier: 37679616

GI number: 37679616

Start: 1460306

End: 1462759

Strand: Direct

Name: 37679616

Synonym: VV1432

Alternate gene names: NA

Gene position: 1460306-1462759 (Clockwise)

Preceding gene: 37679615

Following gene: 37679617

Centisome position: 43.53

GC content: 46.78

Gene sequence:

>2454_bases
ATGTTATGGCCCGTAGTTAAGGCACTACTCGGTCACTACAGACGTTACCCGCTACAAATATTATTGGTGTGGCTTGGCCT
CACGTTAGGCGTGTCTTTATTGGTTGGCGTCACAGCCATCAATCACCATGCGCAAGAAAGCTATCAAAACGGCGAGAAAC
TCTTCAATAACCCTTTGCCATATCGCATTCGTCCAAAACACAGCGCCAATAAGATTCCCCAAGGTTTTTATATTCAATTA
CGCCGAGCCGGTTTTCAGCAATGCACGCCATTTGATATGCACCATATCAAAACGGCAGATGGTATGGGGTTGATGTTGAT
TGGTATGGATCCGGTTGCCATGCTGCAGTTGGAGAAAGAGACCTCTTTAAATCGCGCCACCTCACTGGCGTTAATGAACC
CGCCTTATCCCATTCTTATTAGCCAAGATCTTGCTGAGCACATGGCGTGGCAAGATGGCGACTTTATTGCTTTAGAAGAT
GGCAGCCAGCTGGGGCCTTTACGTGTTGACCGTGAACAACGCTTAAATGGCAGCCGTATGGTCGCTGACATTTCATTGTT
ACGTATGCTAAAGCGCAGCTCAGGTTTATCGGTGATCGCTTGTGCAGAAATGCCGCCAGAGAAGCTAGAACATCTTAAAC
GTTATTTGCCCAATGGTTTGACGCTGGTTCGAAACAGCCAAGATGAACTGGAATCATTGACCAAAGCATTTCACCTTAAT
CTGACTGCAATGGGGATGCTTTCTTTCCTCGTTGGCTTATTTATTTTCTATCAAGCGATGTCGTTATCGCTTATCCAGCG
TCAACCGCTTGTTGGTATTATGCGACAAACGGGTGTGACTGGCATGCAGCTAGCCAAAGCTTTGTTACTCGAGTTGACCA
TTTTGGTTTTGGTTGCTTGGGCTTGTGGCAATGTTTTAGGGTTGTTTTTGGCAAATGAATTGATCCCTGCTGTTTCTGCT
AGTTTAGGGGATTTGTACGATGCCAACGTAGGCTTGTCGATTGGCTGGAGTTGGGAGTCGAGCTTATACAGTTTGCTTCT
GGCGGTACTTGGCGCATTGATATCGTGTTTGTGGCCGCTCATTCGCTTGTTGAAATCTCAGCCCATTCGTTTGTCCGCTA
AGTTATCGTTGGTGCGTTTTGCAGGCAAAGAGTTCGCTTGGCAAGCTCTCGCTGCTTGTGGTTTCGCCGTAGCGGCGATT
GCCGTTTATCAAGCACCGAAGACGCCAGAATCGGGCTTTACAATCATTGCATTGATGTTGATGAGTGTGGCGCTGTTCAT
GCCTTTTTTAATGTGGAAGGTATTTAACAGCTTCTCTTATACTTTGCGCTGGGTGAATTTACGTTGGTTTTTCGCCGATA
TGGCTGCCAGTATGAGTTATCGTGGTGTTGCCATGATGGCGTTTATGTTGGCGTTGGCGGCCAACATTGGTGTCGAAACC
ATGGTCGGCAGTTTTAGAGACACCACCGATAAGTGGTTAACCCAGCGTTTAGCTGCGGATCTTTACATTTATCCAACCAA
CAATTCTGCGGCGAGATTGAGTAACTGGCTTGAAGCCCAACCGGAAGTGGATGAAGTTTGGTGGCGTTGGGAGAAAGAAC
TGGCGGATGAGCGTGATATCGTTCAAGTGGTCAGTACTGGCCCAAGCGACGGCGAGTTGGAAGCACTAACTGTAAAATTA
GGTGTGCCTAATTATTGGTATCATTTACATCACAGTAAAAGCGTCATGATCAGTGAATCGATGGCGTTAAAACTCGATAT
CCGACCAGGCGATTATCTCGATCTTGCTGCGCCATTAGGTGGAGGCTGGCTGGTCGTTGGGGTGTATTACGATTACGGCA
ATCCTTACAATCAAGTGTTGCTGTCTCACCGCAACTGGCTGTATGCGTTTGCAGGCTCTGGCAACGTGGGCTTAGGCGTG
TTGCTCAAAGACAACGTCAATGGCGAGGGCCTCAAGCATCGCTTGGAAAACATCTTTAGACTGACGTCTGAACGAGTGTT
TGATAACAACAACATTTATAGTCAAGCGATGCGAGTCTTTGATCATACCTTCGCTATTGCAGATACCTTAGGAAATATCA
CGCTGGTGATCGCCGTTTTTGGCCTTTTCTTCGCGACGTTAGCAGGAGAGATGAGCCGTCAAAAGAATATTTCTATTTTG
AGATGTCTGGGTGTTTCGGGTAAAGAACTCATTATTCTTGGTGGTTTACAGTTATTTGTGTTCGGCGTGATTTCCGCTCT
TATCGCGGTTCCACTCGGTATGGCGCTTGCCACGTTGGTGGTGGATATAGTGATTAAGCAGTCGTTTGGTTGGTCTTTGC
AATTGCAAATCGATGTGATTGAGTACGGAGAGACCATTCTTTGGGCGATGATTGCGATTATGCTTGCTGGCGCATTACCC
GTTATCCGTCTGGTTAAGAACACGCCAATGAAATCATTAAGGGATTCATTCTAG

Upstream 100 bases:

>100_bases
CTTACCCGTCAGCTAGACTGCACCTTATTGTTGGTAACACACAGTGAAAAAGTGGCCAAACACATGGAAGGGATGATTCG
CCTGCAAGGGGGACAACTGC

Downstream 100 bases:

>100_bases
ATGAAGTGGTTAGCTGGAAAATCCAATAATCTTGCATTAATGCTCACTTTTCTTTTAGCGGCTATGGTGACAGCTGCGAT
GGGCTTTTATTGGTCTCAAT

Product: peptide ABC transporter permease

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 817; Mature: 817

Protein sequence:

>817_residues
MLWPVVKALLGHYRRYPLQILLVWLGLTLGVSLLVGVTAINHHAQESYQNGEKLFNNPLPYRIRPKHSANKIPQGFYIQL
RRAGFQQCTPFDMHHIKTADGMGLMLIGMDPVAMLQLEKETSLNRATSLALMNPPYPILISQDLAEHMAWQDGDFIALED
GSQLGPLRVDREQRLNGSRMVADISLLRMLKRSSGLSVIACAEMPPEKLEHLKRYLPNGLTLVRNSQDELESLTKAFHLN
LTAMGMLSFLVGLFIFYQAMSLSLIQRQPLVGIMRQTGVTGMQLAKALLLELTILVLVAWACGNVLGLFLANELIPAVSA
SLGDLYDANVGLSIGWSWESSLYSLLLAVLGALISCLWPLIRLLKSQPIRLSAKLSLVRFAGKEFAWQALAACGFAVAAI
AVYQAPKTPESGFTIIALMLMSVALFMPFLMWKVFNSFSYTLRWVNLRWFFADMAASMSYRGVAMMAFMLALAANIGVET
MVGSFRDTTDKWLTQRLAADLYIYPTNNSAARLSNWLEAQPEVDEVWWRWEKELADERDIVQVVSTGPSDGELEALTVKL
GVPNYWYHLHHSKSVMISESMALKLDIRPGDYLDLAAPLGGGWLVVGVYYDYGNPYNQVLLSHRNWLYAFAGSGNVGLGV
LLKDNVNGEGLKHRLENIFRLTSERVFDNNNIYSQAMRVFDHTFAIADTLGNITLVIAVFGLFFATLAGEMSRQKNISIL
RCLGVSGKELIILGGLQLFVFGVISALIAVPLGMALATLVVDIVIKQSFGWSLQLQIDVIEYGETILWAMIAIMLAGALP
VIRLVKNTPMKSLRDSF

Sequences:

>Translated_817_residues
MLWPVVKALLGHYRRYPLQILLVWLGLTLGVSLLVGVTAINHHAQESYQNGEKLFNNPLPYRIRPKHSANKIPQGFYIQL
RRAGFQQCTPFDMHHIKTADGMGLMLIGMDPVAMLQLEKETSLNRATSLALMNPPYPILISQDLAEHMAWQDGDFIALED
GSQLGPLRVDREQRLNGSRMVADISLLRMLKRSSGLSVIACAEMPPEKLEHLKRYLPNGLTLVRNSQDELESLTKAFHLN
LTAMGMLSFLVGLFIFYQAMSLSLIQRQPLVGIMRQTGVTGMQLAKALLLELTILVLVAWACGNVLGLFLANELIPAVSA
SLGDLYDANVGLSIGWSWESSLYSLLLAVLGALISCLWPLIRLLKSQPIRLSAKLSLVRFAGKEFAWQALAACGFAVAAI
AVYQAPKTPESGFTIIALMLMSVALFMPFLMWKVFNSFSYTLRWVNLRWFFADMAASMSYRGVAMMAFMLALAANIGVET
MVGSFRDTTDKWLTQRLAADLYIYPTNNSAARLSNWLEAQPEVDEVWWRWEKELADERDIVQVVSTGPSDGELEALTVKL
GVPNYWYHLHHSKSVMISESMALKLDIRPGDYLDLAAPLGGGWLVVGVYYDYGNPYNQVLLSHRNWLYAFAGSGNVGLGV
LLKDNVNGEGLKHRLENIFRLTSERVFDNNNIYSQAMRVFDHTFAIADTLGNITLVIAVFGLFFATLAGEMSRQKNISIL
RCLGVSGKELIILGGLQLFVFGVISALIAVPLGMALATLVVDIVIKQSFGWSLQLQIDVIEYGETILWAMIAIMLAGALP
VIRLVKNTPMKSLRDSF
>Mature_817_residues
MLWPVVKALLGHYRRYPLQILLVWLGLTLGVSLLVGVTAINHHAQESYQNGEKLFNNPLPYRIRPKHSANKIPQGFYIQL
RRAGFQQCTPFDMHHIKTADGMGLMLIGMDPVAMLQLEKETSLNRATSLALMNPPYPILISQDLAEHMAWQDGDFIALED
GSQLGPLRVDREQRLNGSRMVADISLLRMLKRSSGLSVIACAEMPPEKLEHLKRYLPNGLTLVRNSQDELESLTKAFHLN
LTAMGMLSFLVGLFIFYQAMSLSLIQRQPLVGIMRQTGVTGMQLAKALLLELTILVLVAWACGNVLGLFLANELIPAVSA
SLGDLYDANVGLSIGWSWESSLYSLLLAVLGALISCLWPLIRLLKSQPIRLSAKLSLVRFAGKEFAWQALAACGFAVAAI
AVYQAPKTPESGFTIIALMLMSVALFMPFLMWKVFNSFSYTLRWVNLRWFFADMAASMSYRGVAMMAFMLALAANIGVET
MVGSFRDTTDKWLTQRLAADLYIYPTNNSAARLSNWLEAQPEVDEVWWRWEKELADERDIVQVVSTGPSDGELEALTVKL
GVPNYWYHLHHSKSVMISESMALKLDIRPGDYLDLAAPLGGGWLVVGVYYDYGNPYNQVLLSHRNWLYAFAGSGNVGLGV
LLKDNVNGEGLKHRLENIFRLTSERVFDNNNIYSQAMRVFDHTFAIADTLGNITLVIAVFGLFFATLAGEMSRQKNISIL
RCLGVSGKELIILGGLQLFVFGVISALIAVPLGMALATLVVDIVIKQSFGWSLQLQIDVIEYGETILWAMIAIMLAGALP
VIRLVKNTPMKSLRDSF

Specific function: Unknown

COG id: COG0577

COG function: function code V; ABC-type antimicrobial peptide transport system, permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 90833; Mature: 90833

Theoretical pI: Translated: 7.90; Mature: 7.90

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLWPVVKALLGHYRRYPLQILLVWLGLTLGVSLLVGVTAINHHAQESYQNGEKLFNNPLP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCC
YRIRPKHSANKIPQGFYIQLRRAGFQQCTPFDMHHIKTADGMGLMLIGMDPVAMLQLEKE
EEECCCCCCCCCCCCHHHHEECCCCCCCCCCCHHHEECCCCCEEEEECCCCHHHEEEHHH
TSLNRATSLALMNPPYPILISQDLAEHMAWQDGDFIALEDGSQLGPLRVDREQRLNGSRM
HCHHHHHEEEEECCCCCEEECHHHHHHHCCCCCCEEEECCCCCCCCEECCHHHCCCCCHH
VADISLLRMLKRSSGLSVIACAEMPPEKLEHLKRYLPNGLTLVRNSQDELESLTKAFHLN
HHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHCC
LTAMGMLSFLVGLFIFYQAMSLSLIQRQPLVGIMRQTGVTGMQLAKALLLELTILVLVAW
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
ACGNVLGLFLANELIPAVSASLGDLYDANVGLSIGWSWESSLYSLLLAVLGALISCLWPL
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHH
IRLLKSQPIRLSAKLSLVRFAGKEFAWQALAACGFAVAAIAVYQAPKTPESGFTIIALML
HHHHCCCCCEEEHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
MSVALFMPFLMWKVFNSFSYTLRWVNLRWFFADMAASMSYRGVAMMAFMLALAANIGVET
HHHHHHHHHHHHHHHHCCEEEEEEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHH
MVGSFRDTTDKWLTQRLAADLYIYPTNNSAARLSNWLEAQPEVDEVWWRWEKELADERDI
HHHHHCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHH
VQVVSTGPSDGELEALTVKLGVPNYWYHLHHSKSVMISESMALKLDIRPGDYLDLAAPLG
HHHHHCCCCCCCEEEEEEEECCCCEEEEEECCCEEEEECCEEEEEECCCCCCEEECCCCC
GGWLVVGVYYDYGNPYNQVLLSHRNWLYAFAGSGNVGLGVLLKDNVNGEGLKHRLENIFR
CCEEEEEEEECCCCCHHHHHHHCCCEEEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHH
LTSERVFDNNNIYSQAMRVFDHTFAIADTLGNITLVIAVFGLFFATLAGEMSRQKNISIL
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
RCLGVSGKELIILGGLQLFVFGVISALIAVPLGMALATLVVDIVIKQSFGWSLQLQIDVI
EEECCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEH
EYGETILWAMIAIMLAGALPVIRLVKNTPMKSLRDSF
HHCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCC
>Mature Secondary Structure
MLWPVVKALLGHYRRYPLQILLVWLGLTLGVSLLVGVTAINHHAQESYQNGEKLFNNPLP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCC
YRIRPKHSANKIPQGFYIQLRRAGFQQCTPFDMHHIKTADGMGLMLIGMDPVAMLQLEKE
EEECCCCCCCCCCCCHHHHEECCCCCCCCCCCHHHEECCCCCEEEEECCCCHHHEEEHHH
TSLNRATSLALMNPPYPILISQDLAEHMAWQDGDFIALEDGSQLGPLRVDREQRLNGSRM
HCHHHHHEEEEECCCCCEEECHHHHHHHCCCCCCEEEECCCCCCCCEECCHHHCCCCCHH
VADISLLRMLKRSSGLSVIACAEMPPEKLEHLKRYLPNGLTLVRNSQDELESLTKAFHLN
HHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHCC
LTAMGMLSFLVGLFIFYQAMSLSLIQRQPLVGIMRQTGVTGMQLAKALLLELTILVLVAW
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
ACGNVLGLFLANELIPAVSASLGDLYDANVGLSIGWSWESSLYSLLLAVLGALISCLWPL
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHH
IRLLKSQPIRLSAKLSLVRFAGKEFAWQALAACGFAVAAIAVYQAPKTPESGFTIIALML
HHHHCCCCCEEEHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
MSVALFMPFLMWKVFNSFSYTLRWVNLRWFFADMAASMSYRGVAMMAFMLALAANIGVET
HHHHHHHHHHHHHHHHCCEEEEEEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHH
MVGSFRDTTDKWLTQRLAADLYIYPTNNSAARLSNWLEAQPEVDEVWWRWEKELADERDI
HHHHHCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHH
VQVVSTGPSDGELEALTVKLGVPNYWYHLHHSKSVMISESMALKLDIRPGDYLDLAAPLG
HHHHHCCCCCCCEEEEEEEECCCCEEEEEECCCEEEEECCEEEEEECCCCCCEEECCCCC
GGWLVVGVYYDYGNPYNQVLLSHRNWLYAFAGSGNVGLGVLLKDNVNGEGLKHRLENIFR
CCEEEEEEEECCCCCHHHHHHHCCCEEEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHH
LTSERVFDNNNIYSQAMRVFDHTFAIADTLGNITLVIAVFGLFFATLAGEMSRQKNISIL
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
RCLGVSGKELIILGGLQLFVFGVISALIAVPLGMALATLVVDIVIKQSFGWSLQLQIDVI
EEECCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEH
EYGETILWAMIAIMLAGALPVIRLVKNTPMKSLRDSF
HHCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA