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The map label for this gene is ywbD [H]

Identifier: 37679588

GI number: 37679588

Start: 1430839

End: 1431771

Strand: Direct

Name: ywbD [H]

Synonym: VV1404

Alternate gene names: 37679588

Gene position: 1430839-1431771 (Clockwise)

Preceding gene: 37679587

Following gene: 37679595

Centisome position: 42.65

GC content: 48.34

Gene sequence:

>933_bases
ATGCAAGCATCACACCTAACGACATTTTTCCAGCATGTCGAATCGCAGTTACAGCAAGCTCCCGATGAGATTCGCCGTCT
TTTTCATGGTCGTGGCCGACGTTTTGAAGGGCTAGAACAAATTACCTGTGATTGGCTGCACGGCCAGTTGATCGTCAATC
TCTTCAAACAAGTGGATGAGGCGTTCTTGCAATGCCTCAGAGAAGGTTTGTTAGCCCTAACGAACACACCATTGTGGCAA
GAAAAGCTTGGCCGTTGTGTGGTGATTCAACACCGCTATGCCGATGGTGACCCAGCCGAAGTGTTGGTTGGCGAATTGGA
AGCGCGCCCTGTGGTTGTCGAGAGTGGCCTGAAATATCAATTAGATATTGGCCGAAATCAGAACTTTGGCCTCTTTTTGG
ATATGCGCTATGGCCGCGATTGGGTACGCGAAAATGCCAAACACAAAAATGTACTCAACCTGTTTGCCTACACCTGTGGT
TTCTCTGTTGCGGCGATCGCGGGTGGAGCGGAAAAAGTGGTGAACGTCGATATGGCCAAATCGTCGTTGTCGAAAGGGCG
TGACAACCACAAGTTAAATGAGCACAACATCAATCAGGTTAGCTTCTTGGGATACGACATCTTCAAATCTTGGGGGAAAA
TCAAAAAAGCGGGCCCTTATGATTTGGTGATTATTGATCCGCCGTCGTTTCAAAAGGGCAGTTTTGCGCTAACCAAGGAT
TACAAGAAGATTCTTCGCCGTCTGCCAGAGTTATTGACAGACCAAGGTGAGGTGTTGGCATGCGTTAACTCTCCCGCAGT
GAGCAGTGATTTCTTGATTGAAAGCATGAAAGAAGAAGCGCCTCAGCTGACCTTCCGTGAGCGTTTGGACAATCCCCCTG
AGTTTATGGATATCGACAGTGAAGCCGCGCTGAAAGTGCTGCGCTTCAATTAA

Upstream 100 bases:

>100_bases
GGAACAGCGAGGCGCTTAACCAAGCGATTGAACAATGGTTAACACCTTGGCAACTCAACTGGCCAACCATCAATAAATAA
ACGAATGAGTAGAGACAGAG

Downstream 100 bases:

>100_bases
CAGCGTATCCACCGCACGTGAAAACGCCCTCAATCGTGAGGGCGTTTGTTTATCAAATGCATAGCTTGTTAGTGCAAGCT
CACGTCCAGATCCGATTCGA

Product: SAM-dependent methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 310; Mature: 310

Protein sequence:

>310_residues
MQASHLTTFFQHVESQLQQAPDEIRRLFHGRGRRFEGLEQITCDWLHGQLIVNLFKQVDEAFLQCLREGLLALTNTPLWQ
EKLGRCVVIQHRYADGDPAEVLVGELEARPVVVESGLKYQLDIGRNQNFGLFLDMRYGRDWVRENAKHKNVLNLFAYTCG
FSVAAIAGGAEKVVNVDMAKSSLSKGRDNHKLNEHNINQVSFLGYDIFKSWGKIKKAGPYDLVIIDPPSFQKGSFALTKD
YKKILRRLPELLTDQGEVLACVNSPAVSSDFLIESMKEEAPQLTFRERLDNPPEFMDIDSEAALKVLRFN

Sequences:

>Translated_310_residues
MQASHLTTFFQHVESQLQQAPDEIRRLFHGRGRRFEGLEQITCDWLHGQLIVNLFKQVDEAFLQCLREGLLALTNTPLWQ
EKLGRCVVIQHRYADGDPAEVLVGELEARPVVVESGLKYQLDIGRNQNFGLFLDMRYGRDWVRENAKHKNVLNLFAYTCG
FSVAAIAGGAEKVVNVDMAKSSLSKGRDNHKLNEHNINQVSFLGYDIFKSWGKIKKAGPYDLVIIDPPSFQKGSFALTKD
YKKILRRLPELLTDQGEVLACVNSPAVSSDFLIESMKEEAPQLTFRERLDNPPEFMDIDSEAALKVLRFN
>Mature_310_residues
MQASHLTTFFQHVESQLQQAPDEIRRLFHGRGRRFEGLEQITCDWLHGQLIVNLFKQVDEAFLQCLREGLLALTNTPLWQ
EKLGRCVVIQHRYADGDPAEVLVGELEARPVVVESGLKYQLDIGRNQNFGLFLDMRYGRDWVRENAKHKNVLNLFAYTCG
FSVAAIAGGAEKVVNVDMAKSSLSKGRDNHKLNEHNINQVSFLGYDIFKSWGKIKKAGPYDLVIIDPPSFQKGSFALTKD
YKKILRRLPELLTDQGEVLACVNSPAVSSDFLIESMKEEAPQLTFRERLDNPPEFMDIDSEAALKVLRFN

Specific function: Unknown

COG id: COG1092

COG function: function code R; Predicted SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PUA domain [H]

Homologues:

Organism=Escherichia coli, GI145693111, Length=193, Percent_Identity=30.5699481865285, Blast_Score=92, Evalue=5e-20,
Organism=Escherichia coli, GI1787181, Length=135, Percent_Identity=34.0740740740741, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002478
- InterPro:   IPR015947
- InterPro:   IPR019614 [H]

Pfam domain/function: PF10672 Methyltrans_SAM [H]

EC number: NA

Molecular weight: Translated: 35255; Mature: 35255

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQASHLTTFFQHVESQLQQAPDEIRRLFHGRGRRFEGLEQITCDWLHGQLIVNLFKQVDE
CCCHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
AFLQCLREGLLALTNTPLWQEKLGRCVVIQHRYADGDPAEVLVGELEARPVVVESGLKYQ
HHHHHHHHHHHHHCCCCHHHHHCCCEEEEEEECCCCCHHHHHHHHHCCCCEEEECCCEEE
LDIGRNQNFGLFLDMRYGRDWVRENAKHKNVLNLFAYTCGFSVAAIAGGAEKVVNVDMAK
EECCCCCCCEEEEEECCCHHHHHCCCCHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHH
SSLSKGRDNHKLNEHNINQVSFLGYDIFKSWGKIKKAGPYDLVIIDPPSFQKGSFALTKD
HHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCHHHHH
YKKILRRLPELLTDQGEVLACVNSPAVSSDFLIESMKEEAPQLTFRERLDNPPEFMDIDS
HHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCH
EAALKVLRFN
HHHHEEHCCC
>Mature Secondary Structure
MQASHLTTFFQHVESQLQQAPDEIRRLFHGRGRRFEGLEQITCDWLHGQLIVNLFKQVDE
CCCHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
AFLQCLREGLLALTNTPLWQEKLGRCVVIQHRYADGDPAEVLVGELEARPVVVESGLKYQ
HHHHHHHHHHHHHCCCCHHHHHCCCEEEEEEECCCCCHHHHHHHHHCCCCEEEECCCEEE
LDIGRNQNFGLFLDMRYGRDWVRENAKHKNVLNLFAYTCGFSVAAIAGGAEKVVNVDMAK
EECCCCCCCEEEEEECCCHHHHHCCCCHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHH
SSLSKGRDNHKLNEHNINQVSFLGYDIFKSWGKIKKAGPYDLVIIDPPSFQKGSFALTKD
HHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCHHHHH
YKKILRRLPELLTDQGEVLACVNSPAVSSDFLIESMKEEAPQLTFRERLDNPPEFMDIDS
HHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCH
EAALKVLRFN
HHHHEEHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377 [H]