The gene/protein map for NC_005139 is currently unavailable.
Definition Vibrio vulnificus YJ016 chromosome I, complete sequence.
Accession NC_005139
Length 3,354,505

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The map label for this gene is ttgG [H]

Identifier: 37679580

GI number: 37679580

Start: 1418775

End: 1419890

Strand: Direct

Name: ttgG [H]

Synonym: VV1396

Alternate gene names: 37679580

Gene position: 1418775-1419890 (Clockwise)

Preceding gene: 37679579

Following gene: 37679581

Centisome position: 42.29

GC content: 48.12

Gene sequence:

>1116_bases
GTGAATGGGTTAAAGAGCGAGGGCTATAACGTGAATAAATGGATTGGTTTAACCGCGTTGTCCGCCGCTTTACTGTTAGC
CGGATGTGGGCAACAAAATCAGCCAGCCGCTTTGGCTGACCCAAATGTCAAAATTGTCTCGTTGACTGACGAAGAGATGA
TCGACAGCCTCTATTTCCCCGCGGTAGCAAACGCTGCAGAACGTTCTCACCTCAGTTTTCGAGTCGCTGGAGAAGTCAGG
AGCTTATACGTCAAAGAAGGGGATAGGATAAAAAAAGGCGATGTGATTGCTGAACTTGACCCCACTGATTACCGCTTAGA
CGTGGATAACGCGCAAGCAAGGTTTTCGGTAGTGGATAGCCAGTTTAAGCGCTCGGAGCCGCTGGTGAAAAAAGGGTTAC
TGGCAAAATCTCAGTTTGATGAGATCGCTGCGCAGCGCCAAATTGCACTGGCTGAACTTGAATTGGCAAAACTGCGCCTC
TCGTTTACACAGTTAAAAGCACCTGTTGACGGCATCATTTCACGGGTCAGTGTTGATCAATTTGAAAACGTTCAAGTTGG
GCAGCAAGTGGTCAACATTCACAGTGTTGATGAAGTCGAAATCTTAATTCAGCTTCCAGATCAGCTGTATGTCAATCAGC
CCACCAGAGAAAAGCTTGAGCAAGTTGATGCCTTAGTTCGCGTTCGCAGTGGAAATGAGTACTCGGCAAAAATCAAAGAG
TTCACCACAGAGCCCGATCCAAAAACAGGCACTTTTACGGTCACGCTGACCATGCCGATGCCGGATAAAGAGTACATCTT
AGACGGCATGGCCGTTGAGGTGACTTCACGAGGAGAAGGGGTTGGGCTGGAGTTGAACTCGGGTATTCGTGTCCCGATTG
AGGCCATTTTTAATGCCGATGGGGATGAGCTGGATCGAGAGAAAAAATTTGTTTGGGTGTTAAACGCGGACAATAGCGTT
AGCAAACGTCAAGTCGTTATAGGTAAAGCGTCGAAAGAGAGTGCGCAAATTATTGAGGGGCTAACGCATTCAGAGCAAGT
AGTGGTGGCGGGTATCGCACGACTGCGCGACGGCATTAAAGTGAATGTGATTTCTCAGGAGGCGAACAATGAGTGA

Upstream 100 bases:

>100_bases
GTGGAGCTTAACGACAAGCGCGAAGTGGTTAATGGTCTCAATGATGGTGACCAAATCATTATTTCTGGTGTCAGTGGTAT
CGAGTCAGGGATAAAAGTTC

Downstream 100 bases:

>100_bases
TAAACCAGTAGTGTCGCCTCAAAGCGATGATGAAGTAACGGGCGTCGCAGCGTATTTTATTCGAAATCGTGTGATTAGTT
GGATGATTTCGCTGATCTTT

Product: membrane-fusion protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 371; Mature: 371

Protein sequence:

>371_residues
MNGLKSEGYNVNKWIGLTALSAALLLAGCGQQNQPAALADPNVKIVSLTDEEMIDSLYFPAVANAAERSHLSFRVAGEVR
SLYVKEGDRIKKGDVIAELDPTDYRLDVDNAQARFSVVDSQFKRSEPLVKKGLLAKSQFDEIAAQRQIALAELELAKLRL
SFTQLKAPVDGIISRVSVDQFENVQVGQQVVNIHSVDEVEILIQLPDQLYVNQPTREKLEQVDALVRVRSGNEYSAKIKE
FTTEPDPKTGTFTVTLTMPMPDKEYILDGMAVEVTSRGEGVGLELNSGIRVPIEAIFNADGDELDREKKFVWVLNADNSV
SKRQVVIGKASKESAQIIEGLTHSEQVVVAGIARLRDGIKVNVISQEANNE

Sequences:

>Translated_371_residues
MNGLKSEGYNVNKWIGLTALSAALLLAGCGQQNQPAALADPNVKIVSLTDEEMIDSLYFPAVANAAERSHLSFRVAGEVR
SLYVKEGDRIKKGDVIAELDPTDYRLDVDNAQARFSVVDSQFKRSEPLVKKGLLAKSQFDEIAAQRQIALAELELAKLRL
SFTQLKAPVDGIISRVSVDQFENVQVGQQVVNIHSVDEVEILIQLPDQLYVNQPTREKLEQVDALVRVRSGNEYSAKIKE
FTTEPDPKTGTFTVTLTMPMPDKEYILDGMAVEVTSRGEGVGLELNSGIRVPIEAIFNADGDELDREKKFVWVLNADNSV
SKRQVVIGKASKESAQIIEGLTHSEQVVVAGIARLRDGIKVNVISQEANNE
>Mature_371_residues
MNGLKSEGYNVNKWIGLTALSAALLLAGCGQQNQPAALADPNVKIVSLTDEEMIDSLYFPAVANAAERSHLSFRVAGEVR
SLYVKEGDRIKKGDVIAELDPTDYRLDVDNAQARFSVVDSQFKRSEPLVKKGLLAKSQFDEIAAQRQIALAELELAKLRL
SFTQLKAPVDGIISRVSVDQFENVQVGQQVVNIHSVDEVEILIQLPDQLYVNQPTREKLEQVDALVRVRSGNEYSAKIKE
FTTEPDPKTGTFTVTLTMPMPDKEYILDGMAVEVTSRGEGVGLELNSGIRVPIEAIFNADGDELDREKKFVWVLNADNSV
SKRQVVIGKASKESAQIIEGLTHSEQVVVAGIARLRDGIKVNVISQEANNE

Specific function: The periplasmic linker component of an organic solvent efflux pump. Involved in export of a number of organic solvents, including toluene and styrene. This is the most important solvent efflux pump in this strain, although it can export AMP and some antib

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]

Homologues:

Organism=Escherichia coli, GI87082036, Length=325, Percent_Identity=25.2307692307692, Blast_Score=86, Evalue=4e-18,
Organism=Escherichia coli, GI1786668, Length=384, Percent_Identity=24.21875, Blast_Score=82, Evalue=7e-17,
Organism=Escherichia coli, GI1789929, Length=382, Percent_Identity=23.8219895287958, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI1789665, Length=372, Percent_Identity=24.7311827956989, Blast_Score=74, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006143 [H]

Pfam domain/function: PF00529 HlyD [H]

EC number: NA

Molecular weight: Translated: 40789; Mature: 40789

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGLKSEGYNVNKWIGLTALSAALLLAGCGQQNQPAALADPNVKIVSLTDEEMIDSLYFP
CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCEEEEEECHHHHHHHHHHH
AVANAAERSHLSFRVAGEVRSLYVKEGDRIKKGDVIAELDPTDYRLDVDNAQARFSVVDS
HHHCHHHHCCEEEEEECCEEEEEECCCCCEECCCEEEEECCCCEEEECCCCHHHHHHHHH
QFKRSEPLVKKGLLAKSQFDEIAAQRQIALAELELAKLRLSFTQLKAPVDGIISRVSVDQ
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCHHH
FENVQVGQQVVNIHSVDEVEILIQLPDQLYVNQPTREKLEQVDALVRVRSGNEYSAKIKE
HCCHHHHHHHHHHCCCCCEEEEEECCCHHCCCCCHHHHHHHHHHHHEECCCCCHHHHHHH
FTTEPDPKTGTFTVTLTMPMPDKEYILDGMAVEVTSRGEGVGLELNSGIRVPIEAIFNAD
CCCCCCCCCCEEEEEEEECCCCHHHHHCCEEEEEECCCCCEEEEECCCCCEEEHEEECCC
GDELDREKKFVWVLNADNSVSKRQVVIGKASKESAQIIEGLTHSEQVVVAGIARLRDGIK
CHHCCCCCEEEEEEECCCCCCCEEEEEECCCCHHHHHHHCCCCCCHHHHHHHHHHCCCCE
VNVISQEANNE
EEEEECCCCCC
>Mature Secondary Structure
MNGLKSEGYNVNKWIGLTALSAALLLAGCGQQNQPAALADPNVKIVSLTDEEMIDSLYFP
CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCEEEEEECHHHHHHHHHHH
AVANAAERSHLSFRVAGEVRSLYVKEGDRIKKGDVIAELDPTDYRLDVDNAQARFSVVDS
HHHCHHHHCCEEEEEECCEEEEEECCCCCEECCCEEEEECCCCEEEECCCCHHHHHHHHH
QFKRSEPLVKKGLLAKSQFDEIAAQRQIALAELELAKLRLSFTQLKAPVDGIISRVSVDQ
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCHHH
FENVQVGQQVVNIHSVDEVEILIQLPDQLYVNQPTREKLEQVDALVRVRSGNEYSAKIKE
HCCHHHHHHHHHHCCCCCEEEEEECCCHHCCCCCHHHHHHHHHHHHEECCCCCHHHHHHH
FTTEPDPKTGTFTVTLTMPMPDKEYILDGMAVEVTSRGEGVGLELNSGIRVPIEAIFNAD
CCCCCCCCCCEEEEEEEECCCCHHHHHCCEEEEEECCCCCEEEEECCCCCEEEHEEECCC
GDELDREKKFVWVLNADNSVSKRQVVIGKASKESAQIIEGLTHSEQVVVAGIARLRDGIK
CHHCCCCCEEEEEEECCCCCCCEEEEEECCCCHHHHHHHCCCCCCHHHHHHHHHHCCCCE
VNVISQEANNE
EEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11395460 [H]