| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is 37679528
Identifier: 37679528
GI number: 37679528
Start: 1370958
End: 1371227
Strand: Direct
Name: 37679528
Synonym: VV1344
Alternate gene names: NA
Gene position: 1370958-1371227 (Clockwise)
Preceding gene: 37679524
Following gene: 37679529
Centisome position: 40.87
GC content: 42.22
Gene sequence:
>270_bases ATGACTGACGAAATGCAATTTATGCAAGAGGCGGATCTTATCGAGATCATTGAAAATCAACTTGAAGATGGAAATCCAAT CAAGGTCAAAGAAACGTTGATGCGCCTAATGATGACAGGCACGCCTCGTGAAGATGCGGTGGCGATGATGGCGTGTGCAA TGTCAATTGAGATTTTCGACGTGATGAAAAATGACGGCGAGTTCAATTTAAAACGTTACAGCGAAAACTTGGATTGCCTG CCAGATTTAAGCTTTATGGAAGGTGAATAG
Upstream 100 bases:
>100_bases TCGCTGCTTTTTTCAGCAAAAGGACAAGCGAAAAGAAATTCCGCGCGAGCTCTGAGTGGGAATGTGGCATAGTTGGAAAA AATCCTAATGAGTAAACATC
Downstream 100 bases:
>100_bases CGCCTCGCAAAATAAAAAGTACGTAGCAAACGTTTGCTATAATTGCCTTTATTGCCGCCTATGGGAGTGCGAGTTAGAAT CCGCACTTCTTTTAACCCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 89; Mature: 88
Protein sequence:
>89_residues MTDEMQFMQEADLIEIIENQLEDGNPIKVKETLMRLMMTGTPREDAVAMMACAMSIEIFDVMKNDGEFNLKRYSENLDCL PDLSFMEGE
Sequences:
>Translated_89_residues MTDEMQFMQEADLIEIIENQLEDGNPIKVKETLMRLMMTGTPREDAVAMMACAMSIEIFDVMKNDGEFNLKRYSENLDCL PDLSFMEGE >Mature_88_residues TDEMQFMQEADLIEIIENQLEDGNPIKVKETLMRLMMTGTPREDAVAMMACAMSIEIFDVMKNDGEFNLKRYSENLDCLP DLSFMEGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10248; Mature: 10117
Theoretical pI: Translated: 3.79; Mature: 3.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 12.4 %Met (Translated Protein) 14.6 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 11.4 %Met (Mature Protein) 13.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDEMQFMQEADLIEIIENQLEDGNPIKVKETLMRLMMTGTPREDAVAMMACAMSIEIFD CCCHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH VMKNDGEFNLKRYSENLDCLPDLSFMEGE HHHCCCCCCHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure TDEMQFMQEADLIEIIENQLEDGNPIKVKETLMRLMMTGTPREDAVAMMACAMSIEIFD CCHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH VMKNDGEFNLKRYSENLDCLPDLSFMEGE HHHCCCCCCHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA