Definition Vibrio vulnificus YJ016 chromosome I, complete sequence.
Accession NC_005139
Length 3,354,505

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The map label for this gene is 37679503

Identifier: 37679503

GI number: 37679503

Start: 1344809

End: 1346011

Strand: Direct

Name: 37679503

Synonym: VV1319

Alternate gene names: NA

Gene position: 1344809-1346011 (Clockwise)

Preceding gene: 161486632

Following gene: 37679505

Centisome position: 40.09

GC content: 44.89

Gene sequence:

>1203_bases
ATGCAAAAACAATTTCAATTGCTCGATGAATGGCTTACTGAGCACCAACGATTCTGGCGTTTTGAACCATTTCATCAAAG
TTTGCATGAACAACTTCCTTGGGTCGACACGCATCCTGATATGTGTGCGTGGTTAAACTCACTCTCAGCGCAAGAGTTAT
CACAATACAAACTCGATCCCACTAGTTTGATTGCAGATCTTGGTAGGTTTATTCCAGATAACAGAACGGTATTGGCGAAC
ATTGCACTTGCACCACACTCGATAACGACCATTAAACTCGCTGAGCGTTTTGGTGTCGGAATTCCAGGACGCAAACTTGA
GCAAATTGAAGCAATGGGCTCTTATAGCCTAACTCGTCATCAAGGGAGCGAATGGCTGGAGTGGTGCTCGGGTAAGGGAT
ATTTAGGCCGAGTTCTTTCTTCCCAAACCAGGCAACGCGTGACGAGTTTTGAGTATCAGTTACCCTTGTGCCAAAGTGGT
CAATCCGAAGCGGATGCACTGAATCTGCCCATGCATTTTGTTCAAGGTGACGCTCTTGAATATCAATCTAAACAATACTT
TAAGCCCGAACAGCATGCCGTCGCCTTACATGCCTGCGGAGATTTACATGTTCGAATGATGCAGTATGGTTGCGAGAAAG
GCGTAGCAGCGATGACGATTGCTCCTTGTTGTTATCACCTCATTCAGAGCGACGCTTACCAAGTATTGTCGAGTGTGGCT
AAGCTCTCGACAATACGTCTTAGCCGAAGTGAACTGCGAATTCCATTGCAGCAGACAGTGACTGGTGGAAGCCGGGTTCA
GCGACATCGACAATTAGAGATGACTTTTCGTCTTGGTTTGGATTTGCTACTAAGACAAGAATGTGCTTTTAAAGAGTATG
CGCCTGTACCGAGTATTAAAAAGTCACAGCTTTCACTTGGCTTTGAGGCGTTTTGTCGTTGGGCTGCGGAGGTGAAAGAA
TGGAACTTGCCGCAAGTGAACTTCGATCAGTATGAGGCTGAAGGTGCGAAACGTTTTTGGCGTATGGAAAGGCTAAGCTT
GGTACAGCAAATCTTTCAACGTGCAATTGAAATGTGGCTTATTTATGACAAAGCCATGTATCTCCAAGAACAAGGGTATC
AAGTATCGCTAAGTGAATTTTGCGATCGAGATATTACTCCGAGAAATATTCTTATTCACGCATCTGACAGAAAGAACACC
TAA

Upstream 100 bases:

>100_bases
ATTGATGAAATGTTTAAAGACATCGTTCTTCCCGTTCGTTAAAGCGCTTTCCTCCACCGCTTCTTCCCCCTAAAATGGCG
TCGCAATTTTAGGGGGATAC

Downstream 100 bases:

>100_bases
GAAATGCTTATTTGGCAGTGTTACATATAGACTTTGTTGTTATAACTTAGAACACATCGTAATAAAAAAGCTCGCATTTA
TGCGAGCTTTTTACTGAGAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 400; Mature: 400

Protein sequence:

>400_residues
MQKQFQLLDEWLTEHQRFWRFEPFHQSLHEQLPWVDTHPDMCAWLNSLSAQELSQYKLDPTSLIADLGRFIPDNRTVLAN
IALAPHSITTIKLAERFGVGIPGRKLEQIEAMGSYSLTRHQGSEWLEWCSGKGYLGRVLSSQTRQRVTSFEYQLPLCQSG
QSEADALNLPMHFVQGDALEYQSKQYFKPEQHAVALHACGDLHVRMMQYGCEKGVAAMTIAPCCYHLIQSDAYQVLSSVA
KLSTIRLSRSELRIPLQQTVTGGSRVQRHRQLEMTFRLGLDLLLRQECAFKEYAPVPSIKKSQLSLGFEAFCRWAAEVKE
WNLPQVNFDQYEAEGAKRFWRMERLSLVQQIFQRAIEMWLIYDKAMYLQEQGYQVSLSEFCDRDITPRNILIHASDRKNT

Sequences:

>Translated_400_residues
MQKQFQLLDEWLTEHQRFWRFEPFHQSLHEQLPWVDTHPDMCAWLNSLSAQELSQYKLDPTSLIADLGRFIPDNRTVLAN
IALAPHSITTIKLAERFGVGIPGRKLEQIEAMGSYSLTRHQGSEWLEWCSGKGYLGRVLSSQTRQRVTSFEYQLPLCQSG
QSEADALNLPMHFVQGDALEYQSKQYFKPEQHAVALHACGDLHVRMMQYGCEKGVAAMTIAPCCYHLIQSDAYQVLSSVA
KLSTIRLSRSELRIPLQQTVTGGSRVQRHRQLEMTFRLGLDLLLRQECAFKEYAPVPSIKKSQLSLGFEAFCRWAAEVKE
WNLPQVNFDQYEAEGAKRFWRMERLSLVQQIFQRAIEMWLIYDKAMYLQEQGYQVSLSEFCDRDITPRNILIHASDRKNT
>Mature_400_residues
MQKQFQLLDEWLTEHQRFWRFEPFHQSLHEQLPWVDTHPDMCAWLNSLSAQELSQYKLDPTSLIADLGRFIPDNRTVLAN
IALAPHSITTIKLAERFGVGIPGRKLEQIEAMGSYSLTRHQGSEWLEWCSGKGYLGRVLSSQTRQRVTSFEYQLPLCQSG
QSEADALNLPMHFVQGDALEYQSKQYFKPEQHAVALHACGDLHVRMMQYGCEKGVAAMTIAPCCYHLIQSDAYQVLSSVA
KLSTIRLSRSELRIPLQQTVTGGSRVQRHRQLEMTFRLGLDLLLRQECAFKEYAPVPSIKKSQLSLGFEAFCRWAAEVKE
WNLPQVNFDQYEAEGAKRFWRMERLSLVQQIFQRAIEMWLIYDKAMYLQEQGYQVSLSEFCDRDITPRNILIHASDRKNT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46301; Mature: 46301

Theoretical pI: Translated: 7.33; Mature: 7.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKQFQLLDEWLTEHQRFWRFEPFHQSLHEQLPWVDTHPDMCAWLNSLSAQELSQYKLDP
CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHCHHHHHHHCCCH
TSLIADLGRFIPDNRTVLANIALAPHSITTIKLAERFGVGIPGRKLEQIEAMGSYSLTRH
HHHHHHHHHHCCCCCEEEEEEEECCCCCHHEEEHHHHCCCCCCHHHHHHHHHCCCHHHHH
QGSEWLEWCSGKGYLGRVLSSQTRQRVTSFEYQLPLCQSGQSEADALNLPMHFVQGDALE
CCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHEECCHHCCCCCCCHHHCCCHHHHCCCHHH
YQSKQYFKPEQHAVALHACGDLHVRMMQYGCEKGVAAMTIAPCCYHLIQSDAYQVLSSVA
HCHHHCCCCHHHEEEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
KLSTIRLSRSELRIPLQQTVTGGSRVQRHRQLEMTFRLGLDLLLRQECAFKEYAPVPSIK
HHHHHHCCHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
KSQLSLGFEAFCRWAAEVKEWNLPQVNFDQYEAEGAKRFWRMERLSLVQQIFQRAIEMWL
HHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IYDKAMYLQEQGYQVSLSEFCDRDITPRNILIHASDRKNT
HHHHHHHHHHCCCEEEHHHHCCCCCCCCEEEEEECCCCCC
>Mature Secondary Structure
MQKQFQLLDEWLTEHQRFWRFEPFHQSLHEQLPWVDTHPDMCAWLNSLSAQELSQYKLDP
CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHCHHHHHHHCCCH
TSLIADLGRFIPDNRTVLANIALAPHSITTIKLAERFGVGIPGRKLEQIEAMGSYSLTRH
HHHHHHHHHHCCCCCEEEEEEEECCCCCHHEEEHHHHCCCCCCHHHHHHHHHCCCHHHHH
QGSEWLEWCSGKGYLGRVLSSQTRQRVTSFEYQLPLCQSGQSEADALNLPMHFVQGDALE
CCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHEECCHHCCCCCCCHHHCCCHHHHCCCHHH
YQSKQYFKPEQHAVALHACGDLHVRMMQYGCEKGVAAMTIAPCCYHLIQSDAYQVLSSVA
HCHHHCCCCHHHEEEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
KLSTIRLSRSELRIPLQQTVTGGSRVQRHRQLEMTFRLGLDLLLRQECAFKEYAPVPSIK
HHHHHHCCHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
KSQLSLGFEAFCRWAAEVKEWNLPQVNFDQYEAEGAKRFWRMERLSLVQQIFQRAIEMWL
HHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IYDKAMYLQEQGYQVSLSEFCDRDITPRNILIHASDRKNT
HHHHHHHHHHCCCEEEHHHHCCCCCCCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA