Definition Vibrio vulnificus YJ016 chromosome I, complete sequence.
Accession NC_005139
Length 3,354,505

Click here to switch to the map view.

The map label for this gene is 37679498

Identifier: 37679498

GI number: 37679498

Start: 1337746

End: 1340313

Strand: Direct

Name: 37679498

Synonym: VV1314

Alternate gene names: NA

Gene position: 1337746-1340313 (Clockwise)

Preceding gene: 37679497

Following gene: 161486632

Centisome position: 39.88

GC content: 42.68

Gene sequence:

>2568_bases
GTGATTTGCATGGAGCAAACAATGAATAAGAAAATTTTATCCACGATCATTCCTGCAATGTTACTTGCGGGCTGCAGTAC
AGAAGAAAATGTTGCCAATACAACAACCGGATCATCTACCAGTGTAGTAGCATCATCGCAAGCAGGTGAAAATGCTATCA
TCACACGTTTCATTAATGCTAACGTTTATGCTGACAGAAACCAAGATGGTTTCCCGTCTGAAAGTGAACTGCTTGGAACA
ACGAATGCAGAGGGGCAGTTCCTTGTCGATAATGAGCTGAAGCAATACCCACTGCTGCTTCAGGCTGTCGCCTATCAAAC
TAAGTCCGTTACAAAACCTGACGAGGTCCTTATAAAAAGCGCTTTGTTTGAAGCATCGTCAAGTAACGCATTTGTATCAT
CTCTAACCACGATTCTAGTGGATGAAGCTAGAAAGTTAGCATCGCGCGATGGAACTACAATCGCTGAACAACTCCCAGTT
GTTGAGCAACAAGTGATTGATGTTCTATCCAGAATCAACGACGCTCCAAAGAATGTACTGGATGTAAACTACTTCAACGC
AGAGACTGTGGGAGAGCAACGCTTAGCTATTGTTGCTAAGTCACTGAACAACGCATTTTTTGAAGGTCATCGTGGATGGG
GAATCGATTTACTTAGTGAGTTTGTCGATGCAGTCAATACGTTGTCTGAAGAGCAGCTTGCCAACAGTCACAGCTATATT
AAGGCGAAGGTGAAAAACTTAGGTGAAGGCTTGGGCTATGTAGAAACCGTTGAACTTGCAACGGAATATCATGTTGCACC
TTTGTTTAAGTCAGCAATTGAAAGCTATCTATCGCCTTTTAACTTGAAGCAAGGCACTCGCATTGAGGTGACAGAAGTTC
GTTCATTGTTGAACTTTATCGCAAATCTAGCCGATACCCATGTTGAAGTGGTTGATGGTAGAGGAAATGCCATTCAAAAC
ATCGCGGGTCTTTCGATAGCAGTGACTCGTGAAGTTGCGGGTGAAGTAAATCCAGTAGACTCTTCTAAGTTTCAAGAGGA
TAAGTTGGAGCTTGCGATGACTGGCATGCCTTCCATTCCGGGTATGCACCAGTTTTTTGTAAAAGTGACCAACAAAACCA
CAGGTGAATATGTGGTAGTGCCATATCAGTTAGAAGTGGCAACTAAATATGAACAGATTGAACGCTCAGCATCGTTTGAT
TCTGGCATTGCAGCTCTAGCGGCTAAGTTCCCATCACAAATGAAATCAAATGAAACACATATTGTTGATGTGACTCCAGA
GGAGCTAAAAAACCTGTTTAATGCGCCCCAAGGGACTGACCTACAAGTAACTTTGACTGGTGATCAACCATTCATCTGGA
CACAGAAGAAGAACATTCCCGATCTTGCGAACGCGATTGCGGTTGATCAAAATCTGACCGAGCAAGAAAAAACAGCGGAG
TCAGACAAATGGGTTGCCTATATTCAAACGGGTGATGTTGGTGGTGTTATTGGTTTAGAGGTTGTAGCTAGCTATTCAGT
GAACGAACAAGAAACTCCAGTGATCGCATCTGCGCTTGAAGAACAGGTCACTCGAGTTTTTGTTTATGGTTCTGAGAATG
ATTCAACAGAGCAAGCGTTAGTCGGTAAAACGTTCCTAGTTGATGGGGGCCTTTTCTCTCCAACACCGGAAAACTATAAG
TCATGTTCATTAGTTTCCTTTAACGATGGAATTATTTTTGCGTCTCAGCTAGAACAGTCAACATACGAACAATGTGATAT
CGGCGCTTCATTGCGAAAAGTCGGCGCTTATACAAAAGATTACAATGGCTTGATTGCCACCATTGCTGATAAAACCTATC
ACTTTTCAGCTGTCTCTTTAACAACTTCTGTTCAAGTAGATAACGGCGTAGGTGGGACAGATACCGTGGCGCAGCCAACA
GGTGATGTTGCTTTGGTACGTATCGCTGCAGACAATTTGCTTGACAGGCATCGTGTTGTATTAACTGATGTCGATAGCAT
TGAGGTTAAAGATCCATACTCTGATTTTAATTCAGCAGCGACTGCGAAATTCTTTGCTAGCTCAGCGCTATTCCCAGCAA
TGGCTAAGCCGAAATCTCCAAGCGGTAACTATTTCGTTGTAGGAAGTGAAGATATTTGGGAAAACAGAGATATGAGCGCT
TCTGCGTTTTATACTTTGAGCCCTGAGCCTAAGCTGACTGTGCAGTTATCTGAGAGTTGTCCGAGCTTACGTCTAGATAG
CTATGGCACTTATATACAATCGCCGATCTTGTCAAACGGTGCGTACTCTAACACAGGCGCGAAAGTAACAGCGTTTAGTG
TAGTTAATGGTGAAAATGAAAACTCCTGTACATTTAGCTACGATTTGAATAGCGTGTCTCCAGCGTTTTTAACACCTGAT
GGTTATTTTGATTTGGTCATCCAAAAACAGCCAAAATCAAATTACTTTGAGTGGACTCAAGCTAATAGGGAAGGGTCAAC
TAGTGTATATCGATCAAACGCGATGAACTACACTCAAACCATTAAGTTACGTGTTTACCCAACTAAACCTGTGGTTTCTG
CTCCTTAA

Upstream 100 bases:

>100_bases
TTGACCAACTTAGTTGTTTTAGACCCTGATTCATCTACTTCCGTTAACATTCTAGTATTTTAAGTGACTAATAATACCGT
ATGGGGATTCATCCCCATAC

Downstream 100 bases:

>100_bases
TGGCAATTTCACATGCAAATCAAAGCCCGCTTACCAGCGCAATGTAGTTCACTTAAGAGGAGCTGCCTTGCGATTAACAG
GATATCGGGTCTTTGATATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 855; Mature: 855

Protein sequence:

>855_residues
MICMEQTMNKKILSTIIPAMLLAGCSTEENVANTTTGSSTSVVASSQAGENAIITRFINANVYADRNQDGFPSESELLGT
TNAEGQFLVDNELKQYPLLLQAVAYQTKSVTKPDEVLIKSALFEASSSNAFVSSLTTILVDEARKLASRDGTTIAEQLPV
VEQQVIDVLSRINDAPKNVLDVNYFNAETVGEQRLAIVAKSLNNAFFEGHRGWGIDLLSEFVDAVNTLSEEQLANSHSYI
KAKVKNLGEGLGYVETVELATEYHVAPLFKSAIESYLSPFNLKQGTRIEVTEVRSLLNFIANLADTHVEVVDGRGNAIQN
IAGLSIAVTREVAGEVNPVDSSKFQEDKLELAMTGMPSIPGMHQFFVKVTNKTTGEYVVVPYQLEVATKYEQIERSASFD
SGIAALAAKFPSQMKSNETHIVDVTPEELKNLFNAPQGTDLQVTLTGDQPFIWTQKKNIPDLANAIAVDQNLTEQEKTAE
SDKWVAYIQTGDVGGVIGLEVVASYSVNEQETPVIASALEEQVTRVFVYGSENDSTEQALVGKTFLVDGGLFSPTPENYK
SCSLVSFNDGIIFASQLEQSTYEQCDIGASLRKVGAYTKDYNGLIATIADKTYHFSAVSLTTSVQVDNGVGGTDTVAQPT
GDVALVRIAADNLLDRHRVVLTDVDSIEVKDPYSDFNSAATAKFFASSALFPAMAKPKSPSGNYFVVGSEDIWENRDMSA
SAFYTLSPEPKLTVQLSESCPSLRLDSYGTYIQSPILSNGAYSNTGAKVTAFSVVNGENENSCTFSYDLNSVSPAFLTPD
GYFDLVIQKQPKSNYFEWTQANREGSTSVYRSNAMNYTQTIKLRVYPTKPVVSAP

Sequences:

>Translated_855_residues
MICMEQTMNKKILSTIIPAMLLAGCSTEENVANTTTGSSTSVVASSQAGENAIITRFINANVYADRNQDGFPSESELLGT
TNAEGQFLVDNELKQYPLLLQAVAYQTKSVTKPDEVLIKSALFEASSSNAFVSSLTTILVDEARKLASRDGTTIAEQLPV
VEQQVIDVLSRINDAPKNVLDVNYFNAETVGEQRLAIVAKSLNNAFFEGHRGWGIDLLSEFVDAVNTLSEEQLANSHSYI
KAKVKNLGEGLGYVETVELATEYHVAPLFKSAIESYLSPFNLKQGTRIEVTEVRSLLNFIANLADTHVEVVDGRGNAIQN
IAGLSIAVTREVAGEVNPVDSSKFQEDKLELAMTGMPSIPGMHQFFVKVTNKTTGEYVVVPYQLEVATKYEQIERSASFD
SGIAALAAKFPSQMKSNETHIVDVTPEELKNLFNAPQGTDLQVTLTGDQPFIWTQKKNIPDLANAIAVDQNLTEQEKTAE
SDKWVAYIQTGDVGGVIGLEVVASYSVNEQETPVIASALEEQVTRVFVYGSENDSTEQALVGKTFLVDGGLFSPTPENYK
SCSLVSFNDGIIFASQLEQSTYEQCDIGASLRKVGAYTKDYNGLIATIADKTYHFSAVSLTTSVQVDNGVGGTDTVAQPT
GDVALVRIAADNLLDRHRVVLTDVDSIEVKDPYSDFNSAATAKFFASSALFPAMAKPKSPSGNYFVVGSEDIWENRDMSA
SAFYTLSPEPKLTVQLSESCPSLRLDSYGTYIQSPILSNGAYSNTGAKVTAFSVVNGENENSCTFSYDLNSVSPAFLTPD
GYFDLVIQKQPKSNYFEWTQANREGSTSVYRSNAMNYTQTIKLRVYPTKPVVSAP
>Mature_855_residues
MICMEQTMNKKILSTIIPAMLLAGCSTEENVANTTTGSSTSVVASSQAGENAIITRFINANVYADRNQDGFPSESELLGT
TNAEGQFLVDNELKQYPLLLQAVAYQTKSVTKPDEVLIKSALFEASSSNAFVSSLTTILVDEARKLASRDGTTIAEQLPV
VEQQVIDVLSRINDAPKNVLDVNYFNAETVGEQRLAIVAKSLNNAFFEGHRGWGIDLLSEFVDAVNTLSEEQLANSHSYI
KAKVKNLGEGLGYVETVELATEYHVAPLFKSAIESYLSPFNLKQGTRIEVTEVRSLLNFIANLADTHVEVVDGRGNAIQN
IAGLSIAVTREVAGEVNPVDSSKFQEDKLELAMTGMPSIPGMHQFFVKVTNKTTGEYVVVPYQLEVATKYEQIERSASFD
SGIAALAAKFPSQMKSNETHIVDVTPEELKNLFNAPQGTDLQVTLTGDQPFIWTQKKNIPDLANAIAVDQNLTEQEKTAE
SDKWVAYIQTGDVGGVIGLEVVASYSVNEQETPVIASALEEQVTRVFVYGSENDSTEQALVGKTFLVDGGLFSPTPENYK
SCSLVSFNDGIIFASQLEQSTYEQCDIGASLRKVGAYTKDYNGLIATIADKTYHFSAVSLTTSVQVDNGVGGTDTVAQPT
GDVALVRIAADNLLDRHRVVLTDVDSIEVKDPYSDFNSAATAKFFASSALFPAMAKPKSPSGNYFVVGSEDIWENRDMSA
SAFYTLSPEPKLTVQLSESCPSLRLDSYGTYIQSPILSNGAYSNTGAKVTAFSVVNGENENSCTFSYDLNSVSPAFLTPD
GYFDLVIQKQPKSNYFEWTQANREGSTSVYRSNAMNYTQTIKLRVYPTKPVVSAP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 92938; Mature: 92938

Theoretical pI: Translated: 4.35; Mature: 4.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MICMEQTMNKKILSTIIPAMLLAGCSTEENVANTTTGSSTSVVASSQAGENAIITRFINA
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEEEC
NVYADRNQDGFPSESELLGTTNAEGQFLVDNELKQYPLLLQAVAYQTKSVTKPDEVLIKS
EEEECCCCCCCCCCHHEEECCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCCHHHHHHHH
ALFEASSSNAFVSSLTTILVDEARKLASRDGTTIAEQLPVVEQQVIDVLSRINDAPKNVL
HHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHCCCCCCCEE
DVNYFNAETVGEQRLAIVAKSLNNAFFEGHRGWGIDLLSEFVDAVNTLSEEQLANSHSYI
EEEECCCHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHH
KAKVKNLGEGLGYVETVELATEYHVAPLFKSAIESYLSPFNLKQGTRIEVTEVRSLLNFI
HHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHH
ANLADTHVEVVDGRGNAIQNIAGLSIAVTREVAGEVNPVDSSKFQEDKLELAMTGMPSIP
HHHHCCEEEEEECCCCHHHHHCCCEEEEEHHHCCCCCCCCCCCCHHHHHEEEECCCCCCC
GMHQFFVKVTNKTTGEYVVVPYQLEVATKYEQIERSASFDSGIAALAAKFPSQMKSNETH
CHHEEEEEEECCCCCCEEEEEEEEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCE
IVDVTPEELKNLFNAPQGTDLQVTLTGDQPFIWTQKKNIPDLANAIAVDQNLTEQEKTAE
EEECCHHHHHHHHCCCCCCCEEEEEECCCCEEEECCCCCCHHHHHHHHCCCCCHHHHCCC
SDKWVAYIQTGDVGGVIGLEVVASYSVNEQETPVIASALEEQVTRVFVYGSENDSTEQAL
CCCEEEEEEECCCCCEEHHHHHEECCCCCCCCHHHHHHHHHCEEEEEEECCCCCCCHHHH
VGKTFLVDGGLFSPTPENYKSCSLVSFNDGIIFASQLEQSTYEQCDIGASLRKVGAYTKD
HCEEEEEECCCCCCCCCCCCCEEEEEECCCEEEHHHHHHHHHHHHCCCHHHHHHCCCCCC
YNGLIATIADKTYHFSAVSLTTSVQVDNGVGGTDTVAQPTGDVALVRIAADNLLDRHRVV
CCCEEEEEECCCEEEEEEEEEEEEEECCCCCCCCCCCCCCCCEEEEEEEHHHHHCCCEEE
LTDVDSIEVKDPYSDFNSAATAKFFASSALFPAMAKPKSPSGNYFVVGSEDIWENRDMSA
EEECCCEEECCCHHHHCCHHHHHHHHHHCCCHHHCCCCCCCCCEEEEECHHHCCCCCCCC
SAFYTLSPEPKLTVQLSESCPSLRLDSYGTYIQSPILSNGAYSNTGAKVTAFSVVNGENE
EEEEEECCCCCEEEEECCCCCCCEECCCCHHHHCCHHCCCCCCCCCCEEEEEEEECCCCC
NSCTFSYDLNSVSPAFLTPDGYFDLVIQKQPKSNYFEWTQANREGSTSVYRSNAMNYTQT
CCEEEEEECCCCCCCEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHCCCCCEEEE
IKLRVYPTKPVVSAP
EEEEEECCCCCCCCC
>Mature Secondary Structure
MICMEQTMNKKILSTIIPAMLLAGCSTEENVANTTTGSSTSVVASSQAGENAIITRFINA
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEEEC
NVYADRNQDGFPSESELLGTTNAEGQFLVDNELKQYPLLLQAVAYQTKSVTKPDEVLIKS
EEEECCCCCCCCCCHHEEECCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCCHHHHHHHH
ALFEASSSNAFVSSLTTILVDEARKLASRDGTTIAEQLPVVEQQVIDVLSRINDAPKNVL
HHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHCCCCCCCEE
DVNYFNAETVGEQRLAIVAKSLNNAFFEGHRGWGIDLLSEFVDAVNTLSEEQLANSHSYI
EEEECCCHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHH
KAKVKNLGEGLGYVETVELATEYHVAPLFKSAIESYLSPFNLKQGTRIEVTEVRSLLNFI
HHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHH
ANLADTHVEVVDGRGNAIQNIAGLSIAVTREVAGEVNPVDSSKFQEDKLELAMTGMPSIP
HHHHCCEEEEEECCCCHHHHHCCCEEEEEHHHCCCCCCCCCCCCHHHHHEEEECCCCCCC
GMHQFFVKVTNKTTGEYVVVPYQLEVATKYEQIERSASFDSGIAALAAKFPSQMKSNETH
CHHEEEEEEECCCCCCEEEEEEEEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCE
IVDVTPEELKNLFNAPQGTDLQVTLTGDQPFIWTQKKNIPDLANAIAVDQNLTEQEKTAE
EEECCHHHHHHHHCCCCCCCEEEEEECCCCEEEECCCCCCHHHHHHHHCCCCCHHHHCCC
SDKWVAYIQTGDVGGVIGLEVVASYSVNEQETPVIASALEEQVTRVFVYGSENDSTEQAL
CCCEEEEEEECCCCCEEHHHHHEECCCCCCCCHHHHHHHHHCEEEEEEECCCCCCCHHHH
VGKTFLVDGGLFSPTPENYKSCSLVSFNDGIIFASQLEQSTYEQCDIGASLRKVGAYTKD
HCEEEEEECCCCCCCCCCCCCEEEEEECCCEEEHHHHHHHHHHHHCCCHHHHHHCCCCCC
YNGLIATIADKTYHFSAVSLTTSVQVDNGVGGTDTVAQPTGDVALVRIAADNLLDRHRVV
CCCEEEEEECCCEEEEEEEEEEEEEECCCCCCCCCCCCCCCCEEEEEEEHHHHHCCCEEE
LTDVDSIEVKDPYSDFNSAATAKFFASSALFPAMAKPKSPSGNYFVVGSEDIWENRDMSA
EEECCCEEECCCHHHHCCHHHHHHHHHHCCCHHHCCCCCCCCCEEEEECHHHCCCCCCCC
SAFYTLSPEPKLTVQLSESCPSLRLDSYGTYIQSPILSNGAYSNTGAKVTAFSVVNGENE
EEEEEECCCCCEEEEECCCCCCCEECCCCHHHHCCHHCCCCCCCCCCEEEEEEEECCCCC
NSCTFSYDLNSVSPAFLTPDGYFDLVIQKQPKSNYFEWTQANREGSTSVYRSNAMNYTQT
CCEEEEEECCCCCCCEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHCCCCCEEEE
IKLRVYPTKPVVSAP
EEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA