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The map label for this gene is ccmH [H]

Identifier: 37679440

GI number: 37679440

Start: 1275175

End: 1275612

Strand: Direct

Name: ccmH [H]

Synonym: VV1256

Alternate gene names: 37679440

Gene position: 1275175-1275612 (Clockwise)

Preceding gene: 37679439

Following gene: 37679441

Centisome position: 38.01

GC content: 38.81

Gene sequence:

>438_bases
TTGCTACGTATTTTAAATAGAACATTATTATCGACATGGCTCGTCTTATTCGTCGCTTTTGTCTCTTTCTCTAGTCAGGC
ACAGAACGAGAATACAAGCTCTAATCACGTTGATTTGTTTCAGTTTCATAATGTCGAGCTGCAAGAGAGAGCAATACGTT
TATCCAAGGAATTGCGCTGCCCCCAATGCCAGAATCAGAATCTCCTCGAGTCGAATGCGCAAGTGGCTCGAGATCTGCGT
TTTATTGTGTATAGCCAAATAAATGATGGGAAAAGCGATCAAGAAGTGGTGGACTTTATGACCAGCCGATATGGCAATAT
GGTGTTATATAATCCGCCAATAAATAGCAGTACATTATTACTTTGGATCTTTCCTGTCGTTATTTTGATCATTTTCTTTG
TTATTTCGATCCGAAATATTCACACAAAAAGAATGTGA

Upstream 100 bases:

>100_bases
GGCGTGATTGGCACACCGGAAACCTACTTAATAAACCCTAATGGGGAAATAATGATCAAATTTCGAGGTAAATTAGATCA
AAAACAGTGGAATAAACATT

Downstream 100 bases:

>100_bases
CAATTATTCCATAATAAGCAATTAATTGTGCAATTATCATGCAAGCTGTTATCATTTTTGAAAATTATATGAAATAGTTA
ATTCAGTTATTGTAGGTTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MLRILNRTLLSTWLVLFVAFVSFSSQAQNENTSSNHVDLFQFHNVELQERAIRLSKELRCPQCQNQNLLESNAQVARDLR
FIVYSQINDGKSDQEVVDFMTSRYGNMVLYNPPINSSTLLLWIFPVVILIIFFVISIRNIHTKRM

Sequences:

>Translated_145_residues
MLRILNRTLLSTWLVLFVAFVSFSSQAQNENTSSNHVDLFQFHNVELQERAIRLSKELRCPQCQNQNLLESNAQVARDLR
FIVYSQINDGKSDQEVVDFMTSRYGNMVLYNPPINSSTLLLWIFPVVILIIFFVISIRNIHTKRM
>Mature_145_residues
MLRILNRTLLSTWLVLFVAFVSFSSQAQNENTSSNHVDLFQFHNVELQERAIRLSKELRCPQCQNQNLLESNAQVARDLR
FIVYSQINDGKSDQEVVDFMTSRYGNMVLYNPPINSSTLLLWIFPVVILIIFFVISIRNIHTKRM

Specific function: Required for the biogenesis of c-type cytochromes. Possible subunit of a heme lyase [H]

COG id: COG3088

COG function: function code O; Uncharacterized protein involved in biosynthesis of c-type cytochromes

Gene ontology:

Cell location: Membrane; Single-pass membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CcmH/CycL/Ccl2/NrfF family [H]

Homologues:

Organism=Escherichia coli, GI1788522, Length=96, Percent_Identity=48.9583333333333, Blast_Score=106, Evalue=7e-25,
Organism=Escherichia coli, GI1790512, Length=82, Percent_Identity=52.4390243902439, Blast_Score=96, Evalue=1e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005616 [H]

Pfam domain/function: PF03918 CcmH [H]

EC number: NA

Molecular weight: Translated: 16923; Mature: 16923

Theoretical pI: Translated: 8.75; Mature: 8.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRILNRTLLSTWLVLFVAFVSFSSQAQNENTSSNHVDLFQFHNVELQERAIRLSKELRC
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHCCCHHHHHHHHHHHHCCC
PQCQNQNLLESNAQVARDLRFIVYSQINDGKSDQEVVDFMTSRYGNMVLYNPPINSSTLL
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCHHH
LWIFPVVILIIFFVISIRNIHTKRM
HHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLRILNRTLLSTWLVLFVAFVSFSSQAQNENTSSNHVDLFQFHNVELQERAIRLSKELRC
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHCCCHHHHHHHHHHHHCCC
PQCQNQNLLESNAQVARDLRFIVYSQINDGKSDQEVVDFMTSRYGNMVLYNPPINSSTLL
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCHHH
LWIFPVVILIIFFVISIRNIHTKRM
HHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]