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The map label for this gene is ndpA [C]

Identifier: 37679351

GI number: 37679351

Start: 1181354

End: 1182355

Strand: Direct

Name: ndpA [C]

Synonym: VV1167

Alternate gene names: 37679351

Gene position: 1181354-1182355 (Clockwise)

Preceding gene: 37679349

Following gene: 37679352

Centisome position: 35.22

GC content: 45.21

Gene sequence:

>1002_bases
ATGAGTCTGCATCTTTCAAACGTTATTCTGCATCAGCTTAGTAAAAATGATCAGGATGAGCTAATGGTAAACTACCGTTC
TGAGTCCCTGGTCAATGATTCTTCTACAGAAAATCTGGTCGCTGAGCTGCATCGCGTGTTTCATTCCAAAGCAGGAAAAG
GCTTTGGGTGTTTCCAATCTGACAGCGAATTTCAGATTTGGCTCAATGAATTACAACGTGGCGAACTGAATTTTTATGAT
TTCTCACAAAAATGCGCCGTAAGACTGAAAGAAGAGTTAGCAAAATACCCGTTTGCGGACGAAGGTATTCTTGTGTTTGC
GGAGTACCAGAGCCTAGCGACCGATTATTTGTTCGTGGGCATATTGCCGCTTAATCAAAGTTTGAAAGTGACAGAAGGGT
TGGACATCAGCGCGACCGATTATCTGGACATCAATAAGATGGATATCGCTGCACGTATTGATTTGTCGGTGTACGAAGCA
GATAAAGAATCCAACCGTTATCTCTCTTACATTAAGGGCCGAGTTGGCCGTAAAGTGGCGGATTTCTTCCTCGATTTCTT
ACAAGCGGAAGTGGGCCTAGACAGCAAGCAGCAAAACCAAGTGTTGATGCAAGCACTTGATGATTTCTGTACCGATGCGA
AGTTAGAAAAACAAGAAGTCAACGAGTACAAGAAACAAGTCTATGAATACTGTAATGGCCAGATCAAAGCAGGCGAAGAA
GTGGAAATTCGCGAACTTTCTGGCGAGTTACCACCAAGCCCATCTGGCGCGAGCTTTTTAGAATTTACGCAAGAACAAGG
CTATGGTTTGGAAGAGAGCTTTCCTGCCGATCGTGGCTTAGTGCGCAAGTTGACTAAGTATGTTGGGGCAGGTGGTGGTC
TTAACGTGAGCTTCGACAGTTTGCTGCTGGGAGAGCGCATTTTCTACGATCCAGAGACCGATACGCTGACGATCAAAGGT
ACGCCGCCAAATCTGCGTGACCAACTGACGCGAAATCGTTAA

Upstream 100 bases:

>100_bases
TCGATGTAATCGGCATAAAAACTCTAATAATGATAGTAAAAGCGGCCTATGATAACCTACAATGCCTCGCAACTAAAACC
TTGAAGCAAGATAAAATACT

Downstream 100 bases:

>100_bases
GACAAATGAAGAAAGAGAGCGAGATGCTCTCTTTTTTTGTGACTTCACATTACCCTAGCGGATTGTGTTATAAGCTTATG
AAAGTAACTTGGAATCTCTG

Product: nucleoid-associated protein NdpA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 333; Mature: 332

Protein sequence:

>333_residues
MSLHLSNVILHQLSKNDQDELMVNYRSESLVNDSSTENLVAELHRVFHSKAGKGFGCFQSDSEFQIWLNELQRGELNFYD
FSQKCAVRLKEELAKYPFADEGILVFAEYQSLATDYLFVGILPLNQSLKVTEGLDISATDYLDINKMDIAARIDLSVYEA
DKESNRYLSYIKGRVGRKVADFFLDFLQAEVGLDSKQQNQVLMQALDDFCTDAKLEKQEVNEYKKQVYEYCNGQIKAGEE
VEIRELSGELPPSPSGASFLEFTQEQGYGLEESFPADRGLVRKLTKYVGAGGGLNVSFDSLLLGERIFYDPETDTLTIKG
TPPNLRDQLTRNR

Sequences:

>Translated_333_residues
MSLHLSNVILHQLSKNDQDELMVNYRSESLVNDSSTENLVAELHRVFHSKAGKGFGCFQSDSEFQIWLNELQRGELNFYD
FSQKCAVRLKEELAKYPFADEGILVFAEYQSLATDYLFVGILPLNQSLKVTEGLDISATDYLDINKMDIAARIDLSVYEA
DKESNRYLSYIKGRVGRKVADFFLDFLQAEVGLDSKQQNQVLMQALDDFCTDAKLEKQEVNEYKKQVYEYCNGQIKAGEE
VEIRELSGELPPSPSGASFLEFTQEQGYGLEESFPADRGLVRKLTKYVGAGGGLNVSFDSLLLGERIFYDPETDTLTIKG
TPPNLRDQLTRNR
>Mature_332_residues
SLHLSNVILHQLSKNDQDELMVNYRSESLVNDSSTENLVAELHRVFHSKAGKGFGCFQSDSEFQIWLNELQRGELNFYDF
SQKCAVRLKEELAKYPFADEGILVFAEYQSLATDYLFVGILPLNQSLKVTEGLDISATDYLDINKMDIAARIDLSVYEAD
KESNRYLSYIKGRVGRKVADFFLDFLQAEVGLDSKQQNQVLMQALDDFCTDAKLEKQEVNEYKKQVYEYCNGQIKAGEEV
EIRELSGELPPSPSGASFLEFTQEQGYGLEESFPADRGLVRKLTKYVGAGGGLNVSFDSLLLGERIFYDPETDTLTIKGT
PPNLRDQLTRNR

Specific function: Unknown

COG id: COG3081

COG function: function code R; Nucleoid-associated protein

Gene ontology:

Cell location: Cytoplasm, nucleoid

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the YejK family

Homologues:

Organism=Escherichia coli, GI1788513, Length=331, Percent_Identity=53.7764350453172, Blast_Score=355, Evalue=2e-99,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NDPA1_VIBVY (P60055)

Other databases:

- EMBL:   BA000037
- RefSeq:   NP_933960.1
- STRING:   P60055
- GeneID:   2623966
- GenomeReviews:   BA000037_GR
- KEGG:   vvy:VV1167
- eggNOG:   COG3081
- HOGENOM:   HBG296787
- OMA:   TESEFGH
- ProtClustDB:   PRK00378
- BioCyc:   VVUL196600:VV1167-MONOMER
- GO:   GO:0005737
- GO:   GO:0009295
- HAMAP:   MF_00730
- InterPro:   IPR007358

Pfam domain/function: PF04245 NA37

EC number: NA

Molecular weight: Translated: 37723; Mature: 37592

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLHLSNVILHQLSKNDQDELMVNYRSESLVNDSSTENLVAELHRVFHSKAGKGFGCFQS
CCCCHHHHHHHHHCCCCCHHEEEEECHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC
DSEFQIWLNELQRGELNFYDFSQKCAVRLKEELAKYPFADEGILVFAEYQSLATDYLFVG
CCHHHHHHHHHCCCCCCEECCHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHEEEEE
ILPLNQSLKVTEGLDISATDYLDINKMDIAARIDLSVYEADKESNRYLSYIKGRVGRKVA
EEECCCCEEECCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHH
DFFLDFLQAEVGLDSKQQNQVLMQALDDFCTDAKLEKQEVNEYKKQVYEYCNGQIKAGEE
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC
VEIRELSGELPPSPSGASFLEFTQEQGYGLEESFPADRGLVRKLTKYVGAGGGLNVSFDS
EEHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHH
LLLGERIFYDPETDTLTIKGTPPNLRDQLTRNR
HHHCCEEEECCCCCEEEEECCCCCHHHHHHCCC
>Mature Secondary Structure 
SLHLSNVILHQLSKNDQDELMVNYRSESLVNDSSTENLVAELHRVFHSKAGKGFGCFQS
CCCHHHHHHHHHCCCCCHHEEEEECHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC
DSEFQIWLNELQRGELNFYDFSQKCAVRLKEELAKYPFADEGILVFAEYQSLATDYLFVG
CCHHHHHHHHHCCCCCCEECCHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHEEEEE
ILPLNQSLKVTEGLDISATDYLDINKMDIAARIDLSVYEADKESNRYLSYIKGRVGRKVA
EEECCCCEEECCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHH
DFFLDFLQAEVGLDSKQQNQVLMQALDDFCTDAKLEKQEVNEYKKQVYEYCNGQIKAGEE
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC
VEIRELSGELPPSPSGASFLEFTQEQGYGLEESFPADRGLVRKLTKYVGAGGGLNVSFDS
EEHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHH
LLLGERIFYDPETDTLTIKGTPPNLRDQLTRNR
HHHCCEEEECCCCCEEEEECCCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA