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The map label for this gene is ydiU [C]

Identifier: 37679273

GI number: 37679273

Start: 1091227

End: 1092699

Strand: Direct

Name: ydiU [C]

Synonym: VV1089

Alternate gene names: 37679273

Gene position: 1091227-1092699 (Clockwise)

Preceding gene: 37679272

Following gene: 37679274

Centisome position: 32.53

GC content: 52.34

Gene sequence:

>1473_bases
ATGTCTCTTTGGTCGTCGGTGAAATTTGCTCAACGCTACGCTCAACTCCCCAAGGTATTTTATCGTTTGGTGACCCCTCA
ACCGCTCGACAATAGCCGTTGGGTCATTTGGAATGGTGAACTCGCCCAAGGGTTTGCGTTACCCAAGCACGCTGACGATC
CACAACTGCTCTCTGTTTTCTCCGGTGCGGAGCCGTTTTCTGCCTTCAAGCCTTTAGCGATGAAATACGCCGGCCATCAG
TTTGGGGTTTACAACCCAGATTTAGGCGATGGAAGAGGCTTACTGCTGGGCGAAATGCAAAACCAGCAAGGGCAGTGGTT
CGATATTCATCTTAAAGGCGCAGGGCTGACGCCTTTTTCTCGCATGGGAGATGGCCGAGCGGTGCTGCGCTCAACAATTC
GCGAATACCTCTGCAGCGAAGCGATGGCCGCTCTTGGCATCGAGACAACGCGCGCGTTGGGCATGACGGTGAGCGACACG
CCCGTCTATCGTGAGCAAGTCGAGCAGGGCGCTTGTTTGATTCGTCTTGCCCAAACGCACATCCGCTTTGGTCATTTCGA
GCATTTTTTCTATACCGAACAATATGATGAGTTGCGCCTTCTCGCTGACAATGTCATCGAATGGTACATGCCTGAGTGCA
CCGCACACGACAAACCGTATTTGGCGATGTTTGAACAAGTGGTGGCGCGCACAGCGACCATGATTGCCCAGTGGCAGGCG
GTGGGGTTTGCTCATGGGGTGATGAACACCGACAACATGTCGATTTTGGGTCAAACCTTCGATTACGGTCCTTTTGGTTT
CCTCGATGATTATGAGCCAGGTTACATCTGTAACCACTCCGATTATCAAGGCCGTTACGCGTTTGACCAACAGCCTCGCG
TGGCACTGTGGAATCTCTCTGCACTGGCGCATGCCTTATCACCCTTAGTTGAACGTGATGACTTGGAACTGGCCTTGGCT
CAGTACGAACCGACACTCGGTAAGGTGTTTAGTCAATTGATGAGGCAAAAGCTCGGTTTGCTTAGCCAGCAAGAGGGTGA
CAGCGAGCTATTTAATGCCATGTTTACGTTGTTGGCGGAGAATCACACCGACTACACGCGCTTCTTTCGTACCCTTTCTC
AACTCGATAGTGAGGGTGCACAAACGGTGATCGACCTGTTTATTGACCGAGACGCCGCCCGTGGTTGGCTAAGCCGCTAC
CTTGAACGGGTGGCGCTGGAGCAAACCGCCTCTGGAGAGGCGAAATCTGCCCAGCAACGTTGTGAGCAAATGCGCGCCGT
CAATCCTAAGTACATTTTGCGCAATTATCTCGCGCAACAGGCGATCGACAAAGCGCAGCAGGGCGATTTTTCGGAGGTGC
ATACCCTAGCCAAGCTGCTGAAAAATCCCTATGACGAGCAAGCCGAAATGGAAGCGTATGCTCATCTTCCTCCTGAATGG
GGTAAGAAGATGGTCATCAGTTGCTCTTCTTAA

Upstream 100 bases:

>100_bases
TGGTCGCGCAGTTCAAAGTTTAGAGCCCCTGATTTCTCTCGGTGTTTGTTGAGAGAAGTCTGTGGTAGCGTAGCGAAAAA
CTCATCAGGAAGAATGCGCT

Downstream 100 bases:

>100_bases
GTTATGCCTGCTATACCCTTCCTACTTGAAGCTGCAGCGGTGTTGGCTGCATTCGTTCACCCCAATCACATAGCGTATCT
ATGCTCATGGGGATTCACTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 490; Mature: 489

Protein sequence:

>490_residues
MSLWSSVKFAQRYAQLPKVFYRLVTPQPLDNSRWVIWNGELAQGFALPKHADDPQLLSVFSGAEPFSAFKPLAMKYAGHQ
FGVYNPDLGDGRGLLLGEMQNQQGQWFDIHLKGAGLTPFSRMGDGRAVLRSTIREYLCSEAMAALGIETTRALGMTVSDT
PVYREQVEQGACLIRLAQTHIRFGHFEHFFYTEQYDELRLLADNVIEWYMPECTAHDKPYLAMFEQVVARTATMIAQWQA
VGFAHGVMNTDNMSILGQTFDYGPFGFLDDYEPGYICNHSDYQGRYAFDQQPRVALWNLSALAHALSPLVERDDLELALA
QYEPTLGKVFSQLMRQKLGLLSQQEGDSELFNAMFTLLAENHTDYTRFFRTLSQLDSEGAQTVIDLFIDRDAARGWLSRY
LERVALEQTASGEAKSAQQRCEQMRAVNPKYILRNYLAQQAIDKAQQGDFSEVHTLAKLLKNPYDEQAEMEAYAHLPPEW
GKKMVISCSS

Sequences:

>Translated_490_residues
MSLWSSVKFAQRYAQLPKVFYRLVTPQPLDNSRWVIWNGELAQGFALPKHADDPQLLSVFSGAEPFSAFKPLAMKYAGHQ
FGVYNPDLGDGRGLLLGEMQNQQGQWFDIHLKGAGLTPFSRMGDGRAVLRSTIREYLCSEAMAALGIETTRALGMTVSDT
PVYREQVEQGACLIRLAQTHIRFGHFEHFFYTEQYDELRLLADNVIEWYMPECTAHDKPYLAMFEQVVARTATMIAQWQA
VGFAHGVMNTDNMSILGQTFDYGPFGFLDDYEPGYICNHSDYQGRYAFDQQPRVALWNLSALAHALSPLVERDDLELALA
QYEPTLGKVFSQLMRQKLGLLSQQEGDSELFNAMFTLLAENHTDYTRFFRTLSQLDSEGAQTVIDLFIDRDAARGWLSRY
LERVALEQTASGEAKSAQQRCEQMRAVNPKYILRNYLAQQAIDKAQQGDFSEVHTLAKLLKNPYDEQAEMEAYAHLPPEW
GKKMVISCSS
>Mature_489_residues
SLWSSVKFAQRYAQLPKVFYRLVTPQPLDNSRWVIWNGELAQGFALPKHADDPQLLSVFSGAEPFSAFKPLAMKYAGHQF
GVYNPDLGDGRGLLLGEMQNQQGQWFDIHLKGAGLTPFSRMGDGRAVLRSTIREYLCSEAMAALGIETTRALGMTVSDTP
VYREQVEQGACLIRLAQTHIRFGHFEHFFYTEQYDELRLLADNVIEWYMPECTAHDKPYLAMFEQVVARTATMIAQWQAV
GFAHGVMNTDNMSILGQTFDYGPFGFLDDYEPGYICNHSDYQGRYAFDQQPRVALWNLSALAHALSPLVERDDLELALAQ
YEPTLGKVFSQLMRQKLGLLSQQEGDSELFNAMFTLLAENHTDYTRFFRTLSQLDSEGAQTVIDLFIDRDAARGWLSRYL
ERVALEQTASGEAKSAQQRCEQMRAVNPKYILRNYLAQQAIDKAQQGDFSEVHTLAKLLKNPYDEQAEMEAYAHLPPEWG
KKMVISCSS

Specific function: Unknown

COG id: COG0397

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0061 (SELO) family [H]

Homologues:

Organism=Homo sapiens, GI32880229, Length=546, Percent_Identity=36.2637362637363, Blast_Score=301, Evalue=1e-81,
Organism=Escherichia coli, GI1787999, Length=487, Percent_Identity=50.7186858316222, Blast_Score=482, Evalue=1e-137,
Organism=Saccharomyces cerevisiae, GI6325034, Length=344, Percent_Identity=36.6279069767442, Blast_Score=194, Evalue=2e-50,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003846 [H]

Pfam domain/function: PF02696 UPF0061 [H]

EC number: NA

Molecular weight: Translated: 55625; Mature: 55493

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLWSSVKFAQRYAQLPKVFYRLVTPQPLDNSRWVIWNGELAQGFALPKHADDPQLLSVF
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCHHCCCCCCCCCCCHHHHHHH
SGAEPFSAFKPLAMKYAGHQFGVYNPDLGDGRGLLLGEMQNQQGQWFDIHLKGAGLTPFS
CCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEEECCCCCCHH
RMGDGRAVLRSTIREYLCSEAMAALGIETTRALGMTVSDTPVYREQVEQGACLIRLAQTH
HCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHH
IRFGHFEHFFYTEQYDELRLLADNVIEWYMPECTAHDKPYLAMFEQVVARTATMIAQWQA
HHHCCHHHHEECCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
VGFAHGVMNTDNMSILGQTFDYGPFGFLDDYEPGYICNHSDYQGRYAFDQQPRVALWNLS
HHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCEEEEHHH
ALAHALSPLVERDDLELALAQYEPTLGKVFSQLMRQKLGLLSQQEGDSELFNAMFTLLAE
HHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHC
NHTDYTRFFRTLSQLDSEGAQTVIDLFIDRDAARGWLSRYLERVALEQTASGEAKSAQQR
CCCHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
CEQMRAVNPKYILRNYLAQQAIDKAQQGDFSEVHTLAKLLKNPYDEQAEMEAYAHLPPEW
HHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHH
GKKMVISCSS
CCEEEEEECC
>Mature Secondary Structure 
SLWSSVKFAQRYAQLPKVFYRLVTPQPLDNSRWVIWNGELAQGFALPKHADDPQLLSVF
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCHHCCCCCCCCCCCHHHHHHH
SGAEPFSAFKPLAMKYAGHQFGVYNPDLGDGRGLLLGEMQNQQGQWFDIHLKGAGLTPFS
CCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEEECCCCCCHH
RMGDGRAVLRSTIREYLCSEAMAALGIETTRALGMTVSDTPVYREQVEQGACLIRLAQTH
HCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHH
IRFGHFEHFFYTEQYDELRLLADNVIEWYMPECTAHDKPYLAMFEQVVARTATMIAQWQA
HHHCCHHHHEECCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
VGFAHGVMNTDNMSILGQTFDYGPFGFLDDYEPGYICNHSDYQGRYAFDQQPRVALWNLS
HHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCEEEEHHH
ALAHALSPLVERDDLELALAQYEPTLGKVFSQLMRQKLGLLSQQEGDSELFNAMFTLLAE
HHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHC
NHTDYTRFFRTLSQLDSEGAQTVIDLFIDRDAARGWLSRYLERVALEQTASGEAKSAQQR
CCCHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
CEQMRAVNPKYILRNYLAQQAIDKAQQGDFSEVHTLAKLLKNPYDEQAEMEAYAHLPPEW
HHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHH
GKKMVISCSS
CCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA