| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is phoR [C]
Identifier: 37679249
GI number: 37679249
Start: 1066251
End: 1067507
Strand: Direct
Name: phoR [C]
Synonym: VV1065
Alternate gene names: 37679249
Gene position: 1066251-1067507 (Clockwise)
Preceding gene: 37679248
Following gene: 37679267
Centisome position: 31.79
GC content: 46.94
Gene sequence:
>1257_bases ATGGACAAGGTTACCGACTCAAAGCATAGCGCCTATCCCAGTATTTACCGCAAGATCCGTTGGAGCTTTGGTGTTCTGAC CTTTCTGATGTTCACGCTGTTTTGGAGCTTGATTTATGTGGCGGAAAACAAGCTAGAAGTATTGAGCTTGCACCACTGGT TAGACACAGAAGCCGCTCTGTACAAAGAGAATTATGCAACACTGCAGGACCAAGCACCGTTACCCAATCCGCAGGAGTTT GATAGTTACTGGAGCGAGAAAGAGATACCGAGCTGGCTGCTGGCTTTTTCCAAACCCGGTTTCTATGAATACCTGCAAGG GGAAGAGGACAAACACTTTGTTGTTTTTGCTCATCCTTCCGGTGTTGGCAATATGTACATCGTTTTCCAAGATGATTCGG ATGATTACTTGGATGAGTATGAAAGCTCGTTGCACCAAGTGACTTTTGTATTGGGCGGCATACTCTCCATTGCCATGCTG CTTTATGGTGTGTATATGGTTCGCATTCTGTCGAAACCCTTGACGGAAATTGAACATAAAATTAGTCAAATGCCACCGGA TTGTCCGCCGTTTAGCATCGATACCACGTTCAGCGAAACGCGCCATATTGAGCAGACTCTGTTAGACAGTAAAAATCATA TTGCAGGATTTTTCCAACGTGAGCAGGAGTTTAGCCGCTTCGCTTCTCATGAGCTGCGGACACCGATTATGGTGATCCAG GGTTCCGCCGATATTCTTAGCCGAGTGGAAGGGCAACCCCAAGTCGCGCAAAAAGCGATACGTCGTCTGCATCAAGCAGG TCAGGAAATGAAGGTGCTGACGGAGACGTTTTTGTTGTTGGGTAAATCGGAGATAGAGCCACATCACTTTGGCAATTACG ATCTTCAGCAGTCGTTGGAACAGCAACTGGCGTTGCTCGAGCCCTTGTTTGCTCGTCAGGGCTCGAGTTATGAGCTTGAT CTGTCGCAGCCGAGCCAGGTTCGAGCGCCAGAAAGCTTTATCACCATCGTCATTAATAACCTCATCAAAAATGCTTTCAG CTATAGCGTTGGAAGTATCAACATTGCGCTACATCAGTGTTGTTTTGAAATTCAGAACCGACATGACGGCAATGAAACTT ACAACGCAGGTTATGGATGTGGCTTGGTGATTGTTGAGCGAATTTGCGAGCGGATGAATTGGGCGTTTAGTATGGAAGAT GACGGTACGCATTTTATCGCGAAAGTGCGCTTTCGTTCGGCAGAGACAGAGGAATAG
Upstream 100 bases:
>100_bases GGCGATGAACCGCCGGGGAGTGATGCTCTGCGTAGCCACATTTACGGTTTGCGCACCGCATTGGACAAAGGTTTTTCAGA ATCACGATTAGAGACCATTC
Downstream 100 bases:
>100_bases ACGGTACCTTGATAATGCCGAGCGCCAAATAGCAAAAAAGAGAGCCGAAGCTCTCTTTTTTTAGGTGTATGGTCGGACTG AGAGGATTTGAACCTCCGAC
Product: signal transduction histidine kinase
Products: NA
Alternate protein names: Histidine Kinase; Two-Component System Sensor Protein; Two-Component Sensor; Signal Transduction Histidine Kinase; Periplasmic Sensor Signal Transduction Histidine Kinase; Histidine Kinase A Domain-Containing Protein; Signal Transduction Histidine Kinase-Like; Sensory Transduction Protein Kinase; Two Component Sensor Histidine Kinase; Sensor Histidine Kinase ColS; ATPase Histidine Kinase- DNA Gyrase B- And; Hamp Domain Protein; Two-Component System Sensor Kinase; His Kinase A Domain Protein; Signal Transduction Histidine Kinase-Like Protein; Histidine Kinase A Domain Protein; Sensory Histidine Protein Kinase Two-Component ColS; Two-Component System Sensor Histidine Kinase; Sensor Kinase Protein
Number of amino acids: Translated: 418; Mature: 418
Protein sequence:
>418_residues MDKVTDSKHSAYPSIYRKIRWSFGVLTFLMFTLFWSLIYVAENKLEVLSLHHWLDTEAALYKENYATLQDQAPLPNPQEF DSYWSEKEIPSWLLAFSKPGFYEYLQGEEDKHFVVFAHPSGVGNMYIVFQDDSDDYLDEYESSLHQVTFVLGGILSIAML LYGVYMVRILSKPLTEIEHKISQMPPDCPPFSIDTTFSETRHIEQTLLDSKNHIAGFFQREQEFSRFASHELRTPIMVIQ GSADILSRVEGQPQVAQKAIRRLHQAGQEMKVLTETFLLLGKSEIEPHHFGNYDLQQSLEQQLALLEPLFARQGSSYELD LSQPSQVRAPESFITIVINNLIKNAFSYSVGSINIALHQCCFEIQNRHDGNETYNAGYGCGLVIVERICERMNWAFSMED DGTHFIAKVRFRSAETEE
Sequences:
>Translated_418_residues MDKVTDSKHSAYPSIYRKIRWSFGVLTFLMFTLFWSLIYVAENKLEVLSLHHWLDTEAALYKENYATLQDQAPLPNPQEF DSYWSEKEIPSWLLAFSKPGFYEYLQGEEDKHFVVFAHPSGVGNMYIVFQDDSDDYLDEYESSLHQVTFVLGGILSIAML LYGVYMVRILSKPLTEIEHKISQMPPDCPPFSIDTTFSETRHIEQTLLDSKNHIAGFFQREQEFSRFASHELRTPIMVIQ GSADILSRVEGQPQVAQKAIRRLHQAGQEMKVLTETFLLLGKSEIEPHHFGNYDLQQSLEQQLALLEPLFARQGSSYELD LSQPSQVRAPESFITIVINNLIKNAFSYSVGSINIALHQCCFEIQNRHDGNETYNAGYGCGLVIVERICERMNWAFSMED DGTHFIAKVRFRSAETEE >Mature_418_residues MDKVTDSKHSAYPSIYRKIRWSFGVLTFLMFTLFWSLIYVAENKLEVLSLHHWLDTEAALYKENYATLQDQAPLPNPQEF DSYWSEKEIPSWLLAFSKPGFYEYLQGEEDKHFVVFAHPSGVGNMYIVFQDDSDDYLDEYESSLHQVTFVLGGILSIAML LYGVYMVRILSKPLTEIEHKISQMPPDCPPFSIDTTFSETRHIEQTLLDSKNHIAGFFQREQEFSRFASHELRTPIMVIQ GSADILSRVEGQPQVAQKAIRRLHQAGQEMKVLTETFLLLGKSEIEPHHFGNYDLQQSLEQQLALLEPLFARQGSSYELD LSQPSQVRAPESFITIVINNLIKNAFSYSVGSINIALHQCCFEIQNRHDGNETYNAGYGCGLVIVERICERMNWAFSMED DGTHFIAKVRFRSAETEE
Specific function: Member Of The Two-Component Regulatory System Phor/Phob Involved In The Phosphate Regulon Genes Expression. Phor May Function As A Membrane-Associated Protein Kinase That Phosphorylates Phob In Response To Environmental Signals. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.7.3.- [C]
Molecular weight: Translated: 48087; Mature: 48087
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKVTDSKHSAYPSIYRKIRWSFGVLTFLMFTLFWSLIYVAENKLEVLSLHHWLDTEAAL CCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHH YKENYATLQDQAPLPNPQEFDSYWSEKEIPSWLLAFSKPGFYEYLQGEEDKHFVVFAHPS HHHHHHHCCCCCCCCCCHHHHHHCCCCCCHHHHHHHCCCCHHHHHCCCCCCEEEEEECCC GVGNMYIVFQDDSDDYLDEYESSLHQVTFVLGGILSIAMLLYGVYMVRILSKPLTEIEHK CCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ISQMPPDCPPFSIDTTFSETRHIEQTLLDSKNHIAGFFQREQEFSRFASHELRTPIMVIQ HHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEE GSADILSRVEGQPQVAQKAIRRLHQAGQEMKVLTETFLLLGKSEIEPHHFGNYDLQQSLE CCHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH QQLALLEPLFARQGSSYELDLSQPSQVRAPESFITIVINNLIKNAFSYSVGSINIALHQC HHHHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH CFEIQNRHDGNETYNAGYGCGLVIVERICERMNWAFSMEDDGTHFIAKVRFRSAETEE HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEECCCCCEEEEEEEECCCCCCC >Mature Secondary Structure MDKVTDSKHSAYPSIYRKIRWSFGVLTFLMFTLFWSLIYVAENKLEVLSLHHWLDTEAAL CCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHH YKENYATLQDQAPLPNPQEFDSYWSEKEIPSWLLAFSKPGFYEYLQGEEDKHFVVFAHPS HHHHHHHCCCCCCCCCCHHHHHHCCCCCCHHHHHHHCCCCHHHHHCCCCCCEEEEEECCC GVGNMYIVFQDDSDDYLDEYESSLHQVTFVLGGILSIAMLLYGVYMVRILSKPLTEIEHK CCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ISQMPPDCPPFSIDTTFSETRHIEQTLLDSKNHIAGFFQREQEFSRFASHELRTPIMVIQ HHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEE GSADILSRVEGQPQVAQKAIRRLHQAGQEMKVLTETFLLLGKSEIEPHHFGNYDLQQSLE CCHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH QQLALLEPLFARQGSSYELDLSQPSQVRAPESFITIVINNLIKNAFSYSVGSINIALHQC HHHHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH CFEIQNRHDGNETYNAGYGCGLVIVERICERMNWAFSMEDDGTHFIAKVRFRSAETEE HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEECCCCCEEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA