| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is znuA [H]
Identifier: 37679222
GI number: 37679222
Start: 1038350
End: 1039225
Strand: Direct
Name: znuA [H]
Synonym: VV1038
Alternate gene names: 37679222
Gene position: 1038350-1039225 (Clockwise)
Preceding gene: 37679219
Following gene: 37679223
Centisome position: 30.95
GC content: 45.21
Gene sequence:
>876_bases ATGATTCGCTTTTTATTGTGTACTTTTACACTATTTTTGCCGTTACAAGCGCTTGCCGTTGAGGTTTTAACCAGCATTAA ACCAATACAGCTAATCGTCAATGAGCTTACACAAGAGGTAACGACTCCAACGTTACTCGTGGCTGCCAATGCTTCGCCTC ACGACTACGCTTTGAAACCTTCTGACGTGAAAAAAGTAAGGCGAGCGGATCTGATAGTGTGGTTTGGCTCATCCTTAGAG CCTTTTATGACAAAGTTGGTGTCAGAACATTCCAATGTGCTAACGATCAGCGCGATTCCTTCTCTTAAGTTACGTGAATA CCAAGAGGCTCATCAGCATGATGGCCATGATCACGGTAGCCATGACCCCCATTTTTGGATGGGCATCGACACGGTCAAAC AAGTTGCTCCAGCGATAACGGCGCGTCTGATCGAAATCGACGCGCAGAACGAAGCACAGTACAAAGCTAACTTAAAGCGT TTCATGCAGGGATTGGATGAAACGGATACGCGTTTAAATAAGTTGCTACAAGGAGTGAAAGAGCGCGGCTACTATGTGTT CCATGATGCTTATGGCTACTTTGAACAGCAGTATCAACTTCGCAACCTTGGGCACTTTACGGTTAGCCCGGAGAAAAAGC CTGGAGCGAAAACGTTGATTGAAATTCGTAACCGTTTAGCAAAAGGCGATGTTGTGTGTGTGTTTGCTGAGCCACAATTT ACACCAGCGGTTATCGAAAGTGTCATGAGAGGCAGCTCGGCGAAAAAAGGGGTTCTAGACCCTATTGGTACAGAAGTGAC ACTTGAATCCGGCGGCTACTTTAATTATCTCCTCTCAATGGGGAATGATTTCTACCAATGTTTACATGATAAGTAG
Upstream 100 bases:
>100_bases GGCTAATTAACGCTGACATGAATAGAACTCATTTGCAATTGGTGAGTGTTATAATGTAACATTTTATCCTAATGAACGCT ACTTACCAACTTGGATTATT
Downstream 100 bases:
>100_bases ATCCAACTTCTCCCTATTTACGTGATCCAATTAGTGATATTGGCAACCCTTGCTAAGTTGATATTTTTATCATGCCGCAA TTTCGCTATGATATTTAGCG
Product: zinc ABC transporter, periplasmic zinc-binding protein
Products: Zn (II) [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 291; Mature: 291
Protein sequence:
>291_residues MIRFLLCTFTLFLPLQALAVEVLTSIKPIQLIVNELTQEVTTPTLLVAANASPHDYALKPSDVKKVRRADLIVWFGSSLE PFMTKLVSEHSNVLTISAIPSLKLREYQEAHQHDGHDHGSHDPHFWMGIDTVKQVAPAITARLIEIDAQNEAQYKANLKR FMQGLDETDTRLNKLLQGVKERGYYVFHDAYGYFEQQYQLRNLGHFTVSPEKKPGAKTLIEIRNRLAKGDVVCVFAEPQF TPAVIESVMRGSSAKKGVLDPIGTEVTLESGGYFNYLLSMGNDFYQCLHDK
Sequences:
>Translated_291_residues MIRFLLCTFTLFLPLQALAVEVLTSIKPIQLIVNELTQEVTTPTLLVAANASPHDYALKPSDVKKVRRADLIVWFGSSLE PFMTKLVSEHSNVLTISAIPSLKLREYQEAHQHDGHDHGSHDPHFWMGIDTVKQVAPAITARLIEIDAQNEAQYKANLKR FMQGLDETDTRLNKLLQGVKERGYYVFHDAYGYFEQQYQLRNLGHFTVSPEKKPGAKTLIEIRNRLAKGDVVCVFAEPQF TPAVIESVMRGSSAKKGVLDPIGTEVTLESGGYFNYLLSMGNDFYQCLHDK >Mature_291_residues MIRFLLCTFTLFLPLQALAVEVLTSIKPIQLIVNELTQEVTTPTLLVAANASPHDYALKPSDVKKVRRADLIVWFGSSLE PFMTKLVSEHSNVLTISAIPSLKLREYQEAHQHDGHDHGSHDPHFWMGIDTVKQVAPAITARLIEIDAQNEAQYKANLKR FMQGLDETDTRLNKLLQGVKERGYYVFHDAYGYFEQQYQLRNLGHFTVSPEKKPGAKTLIEIRNRLAKGDVVCVFAEPQF TPAVIESVMRGSSAKKGVLDPIGTEVTLESGGYFNYLLSMGNDFYQCLHDK
Specific function: Involved in the high-affinity zinc uptake transport system [H]
COG id: COG4531
COG function: function code P; ABC-type Zn2+ transport system, periplasmic component/surface adhesin
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 9 family [H]
Homologues:
Organism=Escherichia coli, GI87081990, Length=286, Percent_Identity=41.2587412587413, Blast_Score=230, Evalue=9e-62,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006127 - InterPro: IPR006128 [H]
Pfam domain/function: PF01297 SBP_bac_9 [H]
EC number: NA
Molecular weight: Translated: 32794; Mature: 32794
Theoretical pI: Translated: 6.91; Mature: 6.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRFLLCTFTLFLPLQALAVEVLTSIKPIQLIVNELTQEVTTPTLLVAANASPHDYALKP CHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCC SDVKKVRRADLIVWFGSSLEPFMTKLVSEHSNVLTISAIPSLKLREYQEAHQHDGHDHGS HHHHHHHHHCEEEEECCCCHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCC HDPHFWMGIDTVKQVAPAITARLIEIDAQNEAQYKANLKRFMQGLDETDTRLNKLLQGVK CCCEEEECHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHH ERGYYVFHDAYGYFEQQYQLRNLGHFTVSPEKKPGAKTLIEIRNRLAKGDVVCVFAEPQF HCCEEEEECHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHCCCCEEEEEECCCC TPAVIESVMRGSSAKKGVLDPIGTEVTLESGGYFNYLLSMGNDFYQCLHDK CHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHCHHHHHHHCCC >Mature Secondary Structure MIRFLLCTFTLFLPLQALAVEVLTSIKPIQLIVNELTQEVTTPTLLVAANASPHDYALKP CHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCC SDVKKVRRADLIVWFGSSLEPFMTKLVSEHSNVLTISAIPSLKLREYQEAHQHDGHDHGS HHHHHHHHHCEEEEECCCCHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCC HDPHFWMGIDTVKQVAPAITARLIEIDAQNEAQYKANLKRFMQGLDETDTRLNKLLQGVK CCCEEEECHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHH ERGYYVFHDAYGYFEQQYQLRNLGHFTVSPEKKPGAKTLIEIRNRLAKGDVVCVFAEPQF HCCEEEEECHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHCCCCEEEEEECCCC TPAVIESVMRGSSAKKGVLDPIGTEVTLESGGYFNYLLSMGNDFYQCLHDK CHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Zn (II) [Periplasm]; H2O; ATP [C]
Specific reaction: Zn (II) [Periplasm] + H2O + ATP = Zn (II) [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503; 9298646; 9600841; 9680209 [H]