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The map label for this gene is ybgI [C]

Identifier: 37679210

GI number: 37679210

Start: 1024407

End: 1025246

Strand: Direct

Name: ybgI [C]

Synonym: VV1026

Alternate gene names: 37679210

Gene position: 1024407-1025246 (Clockwise)

Preceding gene: 37679208

Following gene: 37679212

Centisome position: 30.54

GC content: 45.83

Gene sequence:

>840_bases
GTGCTCGAGGTTGGATCCGATATTGTATTGCCGACAAGCTTGAGTATACACTTTGCGTGTAACTTAAGTCTGGAATCTAA
GATGAACAACCTCGAACTAGAAAAAATCTTAAATGAGAAACTGACCCCCCAGTTGATTAAAGATTACTGCCCAAATGGCC
TGCAAATCGAAGGCAGTGAGACGATAAAAAAAATCATCACCGGTGTGACCGCTTCTCAAGCGTTAATCGATAAAGCGGTT
GAGCTCAATGCCGATGCGCTGCTTGTGCACCACGGCTATTTTTGGAAAGGTGAAGCTGAGCCTATCCGTGGCATGAAAGG
AAAACGCGTCCGCACTCTGATTAAAAATGATCTCAACTTATTTGCCTATCACTTGCCTCTCGACATTCACCCGGAGCTCG
GTAACAACGCTGAGCTGGCACGTTTGCTTGAGATAAAGGTTGAGGGTGGTTTAGAAGGGCATCCTCAATCCGTGGCCATG
TTTGGGCGCCTCAAACAACCGCTTACAGGGGCTGAATTTGCCCAAAAAATAGCATCTGCGCTTAACCGCGAACCTTTGCA
CATTGCCCCAGAAAATCGTCATAAAATGATTGAAACGGTAGGTTGGTGTACTGGTGGTGGACAAGATTACATTGAGCTTG
CTGCACAACATGGCCTAGATGCTTTTATCTCTGGCGAAATTTCAGAGCGAACCACTTACAGTGCCCGAGAGCTAGATATC
CATTACTATGCCGCTGGCCATCATGCTACTGAGCGTTACGGAATTAAGGCGCTTGGTGAATGGTTGGTACAACAACACCA
ATTGGATGTTGAATTTATTGATATCGATAATCCGGTATAG

Upstream 100 bases:

>100_bases
GACATCGAGAGGCTGTAACTGAGCAAAAGGTGGTTTCAGTTCAAACAGAGAGGGAGAATGTAATATCCAGTGTAGAAAGC
GCAGTTGTGATTCCATCATT

Downstream 100 bases:

>100_bases
GCCCAATACCATAAAGCCACAAACAAAAAGGGTTGAGACCATGTCTCAACCCTTTTTAGTTTTAACACTGTGCGTATTAC
TCGCGTTCGTGCATAGGTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 279; Mature: 279

Protein sequence:

>279_residues
MLEVGSDIVLPTSLSIHFACNLSLESKMNNLELEKILNEKLTPQLIKDYCPNGLQIEGSETIKKIITGVTASQALIDKAV
ELNADALLVHHGYFWKGEAEPIRGMKGKRVRTLIKNDLNLFAYHLPLDIHPELGNNAELARLLEIKVEGGLEGHPQSVAM
FGRLKQPLTGAEFAQKIASALNREPLHIAPENRHKMIETVGWCTGGGQDYIELAAQHGLDAFISGEISERTTYSARELDI
HYYAAGHHATERYGIKALGEWLVQQHQLDVEFIDIDNPV

Sequences:

>Translated_279_residues
MLEVGSDIVLPTSLSIHFACNLSLESKMNNLELEKILNEKLTPQLIKDYCPNGLQIEGSETIKKIITGVTASQALIDKAV
ELNADALLVHHGYFWKGEAEPIRGMKGKRVRTLIKNDLNLFAYHLPLDIHPELGNNAELARLLEIKVEGGLEGHPQSVAM
FGRLKQPLTGAEFAQKIASALNREPLHIAPENRHKMIETVGWCTGGGQDYIELAAQHGLDAFISGEISERTTYSARELDI
HYYAAGHHATERYGIKALGEWLVQQHQLDVEFIDIDNPV
>Mature_279_residues
MLEVGSDIVLPTSLSIHFACNLSLESKMNNLELEKILNEKLTPQLIKDYCPNGLQIEGSETIKKIITGVTASQALIDKAV
ELNADALLVHHGYFWKGEAEPIRGMKGKRVRTLIKNDLNLFAYHLPLDIHPELGNNAELARLLEIKVEGGLEGHPQSVAM
FGRLKQPLTGAEFAQKIASALNREPLHIAPENRHKMIETVGWCTGGGQDYIELAAQHGLDAFISGEISERTTYSARELDI
HYYAAGHHATERYGIKALGEWLVQQHQLDVEFIDIDNPV

Specific function: Unknown

COG id: COG0327

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0135 (NIF3) family [H]

Homologues:

Organism=Escherichia coli, GI1786928, Length=251, Percent_Identity=57.7689243027888, Blast_Score=300, Evalue=9e-83,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002678 [H]

Pfam domain/function: PF01784 NIF3 [H]

EC number: NA

Molecular weight: Translated: 31002; Mature: 31002

Theoretical pI: Translated: 5.71; Mature: 5.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEVGSDIVLPTSLSIHFACNLSLESKMNNLELEKILNEKLTPQLIKDYCPNGLQIEGSE
CCCCCCCEEEECCEEEEEEEECCHHHCCCCHHHHHHHHHCCCHHHHHHHCCCCCEECCHH
TIKKIITGVTASQALIDKAVELNADALLVHHGYFWKGEAEPIRGMKGKRVRTLIKNDLNL
HHHHHHHCCCHHHHHHHHHHHCCCCEEEEECCEEECCCCCCCCCCCCHHHHHHHHCCCEE
FAYHLPLDIHPELGNNAELARLLEIKVEGGLEGHPQSVAMFGRLKQPLTGAEFAQKIASA
EEEECCEEECCCCCCCHHEEEEEEEEECCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHH
LNREPLHIAPENRHKMIETVGWCTGGGQDYIELAAQHGLDAFISGEISERTTYSARELDI
HCCCCEEECCCCHHHHHHHHCCCCCCCHHHHHHHHHCCCCEEECCCCCCCCCCCCEEEEE
HYYAAGHHATERYGIKALGEWLVQQHQLDVEFIDIDNPV
EEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCC
>Mature Secondary Structure
MLEVGSDIVLPTSLSIHFACNLSLESKMNNLELEKILNEKLTPQLIKDYCPNGLQIEGSE
CCCCCCCEEEECCEEEEEEEECCHHHCCCCHHHHHHHHHCCCHHHHHHHCCCCCEECCHH
TIKKIITGVTASQALIDKAVELNADALLVHHGYFWKGEAEPIRGMKGKRVRTLIKNDLNL
HHHHHHHCCCHHHHHHHHHHHCCCCEEEEECCEEECCCCCCCCCCCCHHHHHHHHCCCEE
FAYHLPLDIHPELGNNAELARLLEIKVEGGLEGHPQSVAMFGRLKQPLTGAEFAQKIASA
EEEECCEEECCCCCCCHHEEEEEEEEECCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHH
LNREPLHIAPENRHKMIETVGWCTGGGQDYIELAAQHGLDAFISGEISERTTYSARELDI
HCCCCEEECCCCHHHHHHHHCCCCCCCHHHHHHHHHCCCCEEECCCCCCCCCCCCEEEEE
HYYAAGHHATERYGIKALGEWLVQQHQLDVEFIDIDNPV
EEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]