| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is adk
Identifier: 37679186
GI number: 37679186
Start: 997760
End: 998404
Strand: Direct
Name: adk
Synonym: VV1002
Alternate gene names: 37679186
Gene position: 997760-998404 (Clockwise)
Preceding gene: 37679184
Following gene: 37679187
Centisome position: 29.74
GC content: 45.89
Gene sequence:
>645_bases ATGCGCATCATTCTTCTAGGTGCTCCAGGTGCAGGTAAAGGCACACAGGCTCAATTCATCATGGAGAAGTATGGTATTCC ACAAATCTCTACTGGTGACATGCTACGTGCTGCTATCAAAGCAGGTACTGAGCTTGGTAAACAAGCAAAAGCTGTTATCG ACGCTGGTCAGCTAGTTTCTGATGAAATCATTCTTGGTCTAATCAAAGAGCGTATTGCTCAAGAAGATTGTGCGAAAGGT TTCCTATTGGATGGTTTCCCACGTACGATTCCACAAGCTGACGGTCTTAAAGAGATGGGTGTGGCAGTTGATTACGTTAT CGAGTTTGACGTTGCTGACGATGTGATCGTTGAGCGTATGGCTGGCCGTCGTGCGCACCTGCCTTCAGGTCGTACTTACC ACGTTGTTTACAACCCACCTAAAGTGGAAGGTAAAGACGACGTAACAGGTGAAGATCTTGTTGTTCGTGACGACGACAAA GAAGAAACCGTACGCGCTCGTTTAGGTGTTTACCACTCACAAACGGCACCACTTATCGAGTACTACGGTAAAGAAGCGGC AGAAAGCAACACGAAGTACCTAAAATTTGATGGTACTAAGCAAGTTGCTCAAGTGAGTGCTGATATCGAGAAGGCATTAG CATAA
Upstream 100 bases:
>100_bases TGTCAATTTGAAGAACACTTATACCGAAACTTACCGTGGGGCATAGCCCAGTAGGCAGTGAGCTTCGGTATAAATCATCA TAATCGAAAGAGGATTCAAC
Downstream 100 bases:
>100_bases TAGGCAATACCTATTATCAACCGTTTTCAGAATTTTGTTATAGTGAAGCGACCTTAAGGTCGCTTTTTTATTATGACCAT CAGCAGTTTAGTTTTGTCAT
Product: adenylate kinase
Products: NA
Alternate protein names: AK; ATP-AMP transphosphorylase [H]
Number of amino acids: Translated: 214; Mature: 214
Protein sequence:
>214_residues MRIILLGAPGAGKGTQAQFIMEKYGIPQISTGDMLRAAIKAGTELGKQAKAVIDAGQLVSDEIILGLIKERIAQEDCAKG FLLDGFPRTIPQADGLKEMGVAVDYVIEFDVADDVIVERMAGRRAHLPSGRTYHVVYNPPKVEGKDDVTGEDLVVRDDDK EETVRARLGVYHSQTAPLIEYYGKEAAESNTKYLKFDGTKQVAQVSADIEKALA
Sequences:
>Translated_214_residues MRIILLGAPGAGKGTQAQFIMEKYGIPQISTGDMLRAAIKAGTELGKQAKAVIDAGQLVSDEIILGLIKERIAQEDCAKG FLLDGFPRTIPQADGLKEMGVAVDYVIEFDVADDVIVERMAGRRAHLPSGRTYHVVYNPPKVEGKDDVTGEDLVVRDDDK EETVRARLGVYHSQTAPLIEYYGKEAAESNTKYLKFDGTKQVAQVSADIEKALA >Mature_214_residues MRIILLGAPGAGKGTQAQFIMEKYGIPQISTGDMLRAAIKAGTELGKQAKAVIDAGQLVSDEIILGLIKERIAQEDCAKG FLLDGFPRTIPQADGLKEMGVAVDYVIEFDVADDVIVERMAGRRAHLPSGRTYHVVYNPPKVEGKDDVTGEDLVVRDDDK EETVRARLGVYHSQTAPLIEYYGKEAAESNTKYLKFDGTKQVAQVSADIEKALA
Specific function: Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. This small ubiquitous enzyme involved in the energy metabolism and nucleotide synthesis, is essential for maintenance and cell growth [H]
COG id: COG0563
COG function: function code F; Adenylate kinase and related kinases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenylate kinase family [H]
Homologues:
Organism=Homo sapiens, GI7524346, Length=193, Percent_Identity=49.740932642487, Blast_Score=202, Evalue=1e-52, Organism=Homo sapiens, GI4502013, Length=193, Percent_Identity=49.740932642487, Blast_Score=202, Evalue=2e-52, Organism=Homo sapiens, GI19923437, Length=185, Percent_Identity=43.7837837837838, Blast_Score=162, Evalue=2e-40, Organism=Homo sapiens, GI310110345, Length=182, Percent_Identity=43.4065934065934, Blast_Score=152, Evalue=2e-37, Organism=Homo sapiens, GI53832003, Length=182, Percent_Identity=43.4065934065934, Blast_Score=152, Evalue=2e-37, Organism=Homo sapiens, GI8051579, Length=182, Percent_Identity=43.4065934065934, Blast_Score=152, Evalue=2e-37, Organism=Homo sapiens, GI53832001, Length=182, Percent_Identity=43.4065934065934, Blast_Score=152, Evalue=2e-37, Organism=Homo sapiens, GI4502011, Length=183, Percent_Identity=31.1475409836066, Blast_Score=102, Evalue=2e-22, Organism=Homo sapiens, GI22749187, Length=186, Percent_Identity=29.5698924731183, Blast_Score=102, Evalue=3e-22, Organism=Homo sapiens, GI28144899, Length=182, Percent_Identity=30.7692307692308, Blast_Score=90, Evalue=1e-18, Organism=Homo sapiens, GI28144897, Length=182, Percent_Identity=30.7692307692308, Blast_Score=90, Evalue=1e-18, Organism=Homo sapiens, GI7706497, Length=211, Percent_Identity=31.2796208530806, Blast_Score=85, Evalue=4e-17, Organism=Homo sapiens, GI21450759, Length=139, Percent_Identity=25.8992805755396, Blast_Score=67, Evalue=9e-12, Organism=Escherichia coli, GI1786680, Length=213, Percent_Identity=74.6478873239437, Blast_Score=335, Evalue=2e-93, Organism=Caenorhabditis elegans, GI17552384, Length=218, Percent_Identity=45.8715596330275, Blast_Score=207, Evalue=2e-54, Organism=Caenorhabditis elegans, GI17537943, Length=187, Percent_Identity=35.2941176470588, Blast_Score=121, Evalue=3e-28, Organism=Caenorhabditis elegans, GI17567503, Length=216, Percent_Identity=32.8703703703704, Blast_Score=112, Evalue=2e-25, Organism=Caenorhabditis elegans, GI17533833, Length=215, Percent_Identity=30.2325581395349, Blast_Score=84, Evalue=6e-17, Organism=Caenorhabditis elegans, GI17550688, Length=186, Percent_Identity=31.7204301075269, Blast_Score=84, Evalue=6e-17, Organism=Saccharomyces cerevisiae, GI6320432, Length=218, Percent_Identity=45.4128440366972, Blast_Score=199, Evalue=4e-52, Organism=Saccharomyces cerevisiae, GI6321018, Length=188, Percent_Identity=44.1489361702128, Blast_Score=152, Evalue=5e-38, Organism=Saccharomyces cerevisiae, GI6322828, Length=214, Percent_Identity=30.8411214953271, Blast_Score=102, Evalue=4e-23, Organism=Drosophila melanogaster, GI22026816, Length=211, Percent_Identity=45.4976303317536, Blast_Score=193, Evalue=6e-50, Organism=Drosophila melanogaster, GI17737899, Length=185, Percent_Identity=45.4054054054054, Blast_Score=157, Evalue=4e-39, Organism=Drosophila melanogaster, GI24645822, Length=185, Percent_Identity=45.4054054054054, Blast_Score=157, Evalue=4e-39, Organism=Drosophila melanogaster, GI17647141, Length=181, Percent_Identity=34.2541436464088, Blast_Score=111, Evalue=3e-25, Organism=Drosophila melanogaster, GI24663208, Length=181, Percent_Identity=34.2541436464088, Blast_Score=111, Evalue=3e-25, Organism=Drosophila melanogaster, GI221459597, Length=213, Percent_Identity=28.169014084507, Blast_Score=89, Evalue=2e-18, Organism=Drosophila melanogaster, GI21356893, Length=213, Percent_Identity=28.169014084507, Blast_Score=89, Evalue=2e-18,
Paralogues:
None
Copy number: 1640 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 60 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 847 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006259 - InterPro: IPR000850 - InterPro: IPR007862 [H]
Pfam domain/function: PF00406 ADK; PF05191 ADK_lid [H]
EC number: =2.7.4.3 [H]
Molecular weight: Translated: 23266; Mature: 23266
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: PS00113 ADENYLATE_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIILLGAPGAGKGTQAQFIMEKYGIPQISTGDMLRAAIKAGTELGKQAKAVIDAGQLVS CEEEEEECCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DEIILGLIKERIAQEDCAKGFLLDGFPRTIPQADGLKEMGVAVDYVIEFDVADDVIVERM HHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCHHHHCCEEEEEEEECCHHHHHHHHH AGRRAHLPSGRTYHVVYNPPKVEGKDDVTGEDLVVRDDDKEETVRARLGVYHSQTAPLIE CCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCCHHHH YYGKEAAESNTKYLKFDGTKQVAQVSADIEKALA HHCCHHHCCCCEEEEECCHHHHHHHHHHHHHHCC >Mature Secondary Structure MRIILLGAPGAGKGTQAQFIMEKYGIPQISTGDMLRAAIKAGTELGKQAKAVIDAGQLVS CEEEEEECCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DEIILGLIKERIAQEDCAKGFLLDGFPRTIPQADGLKEMGVAVDYVIEFDVADDVIVERM HHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCHHHHCCEEEEEEEECCHHHHHHHHH AGRRAHLPSGRTYHVVYNPPKVEGKDDVTGEDLVVRDDDKEETVRARLGVYHSQTAPLIE CCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCCHHHH YYGKEAAESNTKYLKFDGTKQVAQVSADIEKALA HHCCHHHCCCCEEEEECCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA