| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is htpG [H]
Identifier: 37679184
GI number: 37679184
Start: 995544
End: 997454
Strand: Direct
Name: htpG [H]
Synonym: VV1000
Alternate gene names: 37679184
Gene position: 995544-997454 (Clockwise)
Preceding gene: 37679179
Following gene: 37679186
Centisome position: 29.68
GC content: 46.73
Gene sequence:
>1911_bases GTGAAAATGAACGAGACCGTAGCAAATAATAAAGAAACTCGTGGCTTTCAGTCAGAGGTAAAACAACTTCTCCATCTGAT GATCCACTCACTGTATTCCAATAAAGAAATCTTCCTACGCGAGTTGATCTCCAACGCGTCTGACGCAGCCGATAAACTGC GTTTCCAAGCGTTGTCCAATCCTGCACTTTATGAAAATGATGCAGAATTGGGCGTGAAGCTTTCTTTTAACGAAGAACAT AACACGCTGACGATTTCCGATAACGGGATTGGTATGAGCCGCGAAGAGGTGATTTCGCATCTGGGCACCATTGCCAAATC TGGTACGGCGGAGTTTTTCTCTAAACTATCTCAAGAGCAATCAAAAGATTCTCAGTTGATTGGTCAGTTTGGTGTTGGTT TCTATTCGGCCTTCATTGTGGCCGACGCAGTGACGGTACGTACGCGAGCGGCGGGCCTGAATGCAGACCAAGCGGTACTT TGGCATTCTGCAGGTGAAGGTGAGTACACCGTTGAAGACATTACCAAAGAATCACGTGGTACCGATATTATTCTGCACAT GCGTGAAGACGGCAAAGAGTTCCTCAACGAATGGCGTTTACGTGATGTGATTGGTAAGTATTCCGATCACATTGGCATTC CTGTTTCTATTCAAACCCGTGTTCGTGATGAAGAAGGCAAAGAAACAGAAGAAGTGAAGTGGGAGCAAATCAATAAAGCC CAAGCACTTTGGACGCGCAATAAATCCGATATCTCAGACGAAGAGTATCAAGAGTTTTACAAGCATGTCTCTCACGATTT TGCTGACCCATTACTTTGGAGTCACAACCGAGTAGAAGGCAAAAACGACTATACCAGCCTCCTTTATATTCCATCGAAAG CGCCTTGGGATATGATGAACCGTGACCATAAATCTGGTCTTAAACTCTATGTTCAGCGCGTTTTCATCATGGATGATGCT GAGCAATTTATGCCATCTTACCTGCGTTTTGTCCGCGGTTTGATTGATTCCAACGATCTGCCGCTCAACGTCTCTCGCGA GATCTTGCAAGACAACAAGGTGACTCAATCGCTACGCGGTGCGTGCACTAAACGTGTTTTAACCATGCTCGAGCGCTTGG CGAAAAATGACACAGAAAAATACCAAACCTTCTGGAAAGAATTTGGTTTGGTGATGAAGGAAGGCCCCGCTGAAGATTAC GCCAACCGCGAGAAAGTGGCGGCGTTGTTACGCTTTGCCTCAACAGAAGTGGACTCTGCAGAGCAGACCGTTTCTCTTGA GTCTTATGTTGAGCGTATGAAAGAAGGCCAAGACAAGATCTACTACCTCACAGCAGACAGCTATGCGGCAGCGAAAAACA GCCCTCACTTGGAGCAGTTTAAAGCCAAAGGTCTTGAAGTTATTTTAATGTTTGACCGTATTGACGAATGGTTGATGAAC TACCTAACAGAGTTTGATGGTAAGCAGTTCCAGTCAATCACGAAAGCGGGCCTTGATCTTAGCCAATTTGAAGATGAGCA AGAGAAAGAGAAGCAGAAAGAAACGGAGCAAGAGTTCCAGTCAGTGGTTGAGCGCACCAAGAGCTACTTGGGTGATCGCG TGAAAGAGGTGCGTACCACCTTCAAGCTAGCGAATACTCCTGCGGTGGTGGTGACCGACGATTTCGAAATGGGCACGCAG ATGGCTAAACTACTGGCGGCAGCAGGGCAGGCTGTTCCTGAAGTGAAGTACATTTTTGAGATCAACCCAAATCATACGCT GGTTAAGCAAATGGCGGATGAGGCGGATGAAGAAGCGTTTGGCCGCTGGGTTGAGGTATTACTCGGCCAAGCGATGTTGG CGGAACGTGGCTCAATGGAAGATCCTAGCCAGTTCTTAACGGCCATTAACTCGCTTTTGACTAAGGGCTAA
Upstream 100 bases:
>100_bases AAAAACAGCGTTTTTACCACAATTGACCTTGAATTTACATTTGTCAGCCATATGTTACGTAACAAGCGATTGATTTCCCA CCCAATTAGAGAACTTTGGA
Downstream 100 bases:
>100_bases TAAGGCTAAAATCACCAAAAAGCTCGCATTTGCGGGCTTTTTGTATGTATCGGCATTCAACATGCAAAAAAATGATGGTT TCCAAAGCGATTTGTGAGAG
Product: heat shock protein 90
Products: NA
Alternate protein names: Heat shock protein htpG; High temperature protein G [H]
Number of amino acids: Translated: 636; Mature: 636
Protein sequence:
>636_residues MKMNETVANNKETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFQALSNPALYENDAELGVKLSFNEEH NTLTISDNGIGMSREEVISHLGTIAKSGTAEFFSKLSQEQSKDSQLIGQFGVGFYSAFIVADAVTVRTRAAGLNADQAVL WHSAGEGEYTVEDITKESRGTDIILHMREDGKEFLNEWRLRDVIGKYSDHIGIPVSIQTRVRDEEGKETEEVKWEQINKA QALWTRNKSDISDEEYQEFYKHVSHDFADPLLWSHNRVEGKNDYTSLLYIPSKAPWDMMNRDHKSGLKLYVQRVFIMDDA EQFMPSYLRFVRGLIDSNDLPLNVSREILQDNKVTQSLRGACTKRVLTMLERLAKNDTEKYQTFWKEFGLVMKEGPAEDY ANREKVAALLRFASTEVDSAEQTVSLESYVERMKEGQDKIYYLTADSYAAAKNSPHLEQFKAKGLEVILMFDRIDEWLMN YLTEFDGKQFQSITKAGLDLSQFEDEQEKEKQKETEQEFQSVVERTKSYLGDRVKEVRTTFKLANTPAVVVTDDFEMGTQ MAKLLAAAGQAVPEVKYIFEINPNHTLVKQMADEADEEAFGRWVEVLLGQAMLAERGSMEDPSQFLTAINSLLTKG
Sequences:
>Translated_636_residues MKMNETVANNKETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFQALSNPALYENDAELGVKLSFNEEH NTLTISDNGIGMSREEVISHLGTIAKSGTAEFFSKLSQEQSKDSQLIGQFGVGFYSAFIVADAVTVRTRAAGLNADQAVL WHSAGEGEYTVEDITKESRGTDIILHMREDGKEFLNEWRLRDVIGKYSDHIGIPVSIQTRVRDEEGKETEEVKWEQINKA QALWTRNKSDISDEEYQEFYKHVSHDFADPLLWSHNRVEGKNDYTSLLYIPSKAPWDMMNRDHKSGLKLYVQRVFIMDDA EQFMPSYLRFVRGLIDSNDLPLNVSREILQDNKVTQSLRGACTKRVLTMLERLAKNDTEKYQTFWKEFGLVMKEGPAEDY ANREKVAALLRFASTEVDSAEQTVSLESYVERMKEGQDKIYYLTADSYAAAKNSPHLEQFKAKGLEVILMFDRIDEWLMN YLTEFDGKQFQSITKAGLDLSQFEDEQEKEKQKETEQEFQSVVERTKSYLGDRVKEVRTTFKLANTPAVVVTDDFEMGTQ MAKLLAAAGQAVPEVKYIFEINPNHTLVKQMADEADEEAFGRWVEVLLGQAMLAERGSMEDPSQFLTAINSLLTKG >Mature_636_residues MKMNETVANNKETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFQALSNPALYENDAELGVKLSFNEEH NTLTISDNGIGMSREEVISHLGTIAKSGTAEFFSKLSQEQSKDSQLIGQFGVGFYSAFIVADAVTVRTRAAGLNADQAVL WHSAGEGEYTVEDITKESRGTDIILHMREDGKEFLNEWRLRDVIGKYSDHIGIPVSIQTRVRDEEGKETEEVKWEQINKA QALWTRNKSDISDEEYQEFYKHVSHDFADPLLWSHNRVEGKNDYTSLLYIPSKAPWDMMNRDHKSGLKLYVQRVFIMDDA EQFMPSYLRFVRGLIDSNDLPLNVSREILQDNKVTQSLRGACTKRVLTMLERLAKNDTEKYQTFWKEFGLVMKEGPAEDY ANREKVAALLRFASTEVDSAEQTVSLESYVERMKEGQDKIYYLTADSYAAAKNSPHLEQFKAKGLEVILMFDRIDEWLMN YLTEFDGKQFQSITKAGLDLSQFEDEQEKEKQKETEQEFQSVVERTKSYLGDRVKEVRTTFKLANTPAVVVTDDFEMGTQ MAKLLAAAGQAVPEVKYIFEINPNHTLVKQMADEADEEAFGRWVEVLLGQAMLAERGSMEDPSQFLTAINSLLTKG
Specific function: Molecular chaperone. Has ATPase activity [H]
COG id: COG0326
COG function: function code O; Molecular chaperone, HSP90 family
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the heat shock protein 90 family [H]
Homologues:
Organism=Homo sapiens, GI153792590, Length=690, Percent_Identity=37.536231884058, Blast_Score=429, Evalue=1e-120, Organism=Homo sapiens, GI20149594, Length=686, Percent_Identity=37.0262390670554, Blast_Score=419, Evalue=1e-117, Organism=Homo sapiens, GI4507677, Length=633, Percent_Identity=36.9668246445498, Blast_Score=406, Evalue=1e-113, Organism=Homo sapiens, GI155722983, Length=647, Percent_Identity=35.2395672333849, Blast_Score=382, Evalue=1e-106, Organism=Homo sapiens, GI154146191, Length=416, Percent_Identity=37.0192307692308, Blast_Score=262, Evalue=7e-70, Organism=Escherichia coli, GI1786679, Length=624, Percent_Identity=70.8333333333333, Blast_Score=927, Evalue=0.0, Organism=Caenorhabditis elegans, GI17559162, Length=678, Percent_Identity=37.0206489675516, Blast_Score=449, Evalue=1e-126, Organism=Caenorhabditis elegans, GI17542208, Length=673, Percent_Identity=36.2555720653789, Blast_Score=402, Evalue=1e-112, Organism=Caenorhabditis elegans, GI115535205, Length=646, Percent_Identity=32.6625386996904, Blast_Score=314, Evalue=8e-86, Organism=Caenorhabditis elegans, GI115535167, Length=436, Percent_Identity=35.3211009174312, Blast_Score=255, Evalue=4e-68, Organism=Saccharomyces cerevisiae, GI6323840, Length=681, Percent_Identity=38.1791483113069, Blast_Score=445, Evalue=1e-126, Organism=Saccharomyces cerevisiae, GI6325016, Length=687, Percent_Identity=37.5545851528384, Blast_Score=441, Evalue=1e-124, Organism=Drosophila melanogaster, GI17647529, Length=685, Percent_Identity=37.956204379562, Blast_Score=464, Evalue=1e-131, Organism=Drosophila melanogaster, GI21357739, Length=696, Percent_Identity=37.0689655172414, Blast_Score=413, Evalue=1e-115, Organism=Drosophila melanogaster, GI24586016, Length=651, Percent_Identity=33.4869431643625, Blast_Score=367, Evalue=1e-101,
Paralogues:
None
Copy number: 640 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 2419 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR019805 - InterPro: IPR001404 - InterPro: IPR020575 - InterPro: IPR020568 [H]
Pfam domain/function: PF02518 HATPase_c; PF00183 HSP90 [H]
EC number: NA
Molecular weight: Translated: 72599; Mature: 72599
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: PS00298 HSP90
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKMNETVANNKETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFQALSN CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHCCC PALYENDAELGVKLSFNEEHNTLTISDNGIGMSREEVISHLGTIAKSGTAEFFSKLSQEQ CCCCCCCCCCCEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHH SKDSQLIGQFGVGFYSAFIVADAVTVRTRAAGLNADQAVLWHSAGEGEYTVEDITKESRG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCEEHHHHHHHCCC TDIILHMREDGKEFLNEWRLRDVIGKYSDHIGIPVSIQTRVRDEEGKETEEVKWEQINKA CEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHH QALWTRNKSDISDEEYQEFYKHVSHDFADPLLWSHNRVEGKNDYTSLLYIPSKAPWDMMN HHHHCCCCCCCCHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCEEEEEECCCCCHHHHC RDHKSGLKLYVQRVFIMDDAEQFMPSYLRFVRGLIDSNDLPLNVSREILQDNKVTQSLRG CCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH ACTKRVLTMLERLAKNDTEKYQTFWKEFGLVMKEGPAEDYANREKVAALLRFASTEVDSA HHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHCCCCCHHHCCHHHHHHHHHHHHCCCCCH EQTVSLESYVERMKEGQDKIYYLTADSYAAAKNSPHLEQFKAKGLEVILMFDRIDEWLMN HHHHHHHHHHHHHHCCCCEEEEEECCCHHHCCCCCCHHHHHHCCCEEEEHHHHHHHHHHH YLTEFDGKQFQSITKAGLDLSQFEDEQEKEKQKETEQEFQSVVERTKSYLGDRVKEVRTT HHHHCCCHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FKLANTPAVVVTDDFEMGTQMAKLLAAAGQAVPEVKYIFEINPNHTLVKQMADEADEEAF HHCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHCCHHHH GRWVEVLLGQAMLAERGSMEDPSQFLTAINSLLTKG HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure MKMNETVANNKETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFQALSN CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHCCC PALYENDAELGVKLSFNEEHNTLTISDNGIGMSREEVISHLGTIAKSGTAEFFSKLSQEQ CCCCCCCCCCCEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHH SKDSQLIGQFGVGFYSAFIVADAVTVRTRAAGLNADQAVLWHSAGEGEYTVEDITKESRG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCEEHHHHHHHCCC TDIILHMREDGKEFLNEWRLRDVIGKYSDHIGIPVSIQTRVRDEEGKETEEVKWEQINKA CEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHH QALWTRNKSDISDEEYQEFYKHVSHDFADPLLWSHNRVEGKNDYTSLLYIPSKAPWDMMN HHHHCCCCCCCCHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCEEEEEECCCCCHHHHC RDHKSGLKLYVQRVFIMDDAEQFMPSYLRFVRGLIDSNDLPLNVSREILQDNKVTQSLRG CCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH ACTKRVLTMLERLAKNDTEKYQTFWKEFGLVMKEGPAEDYANREKVAALLRFASTEVDSA HHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHCCCCCHHHCCHHHHHHHHHHHHCCCCCH EQTVSLESYVERMKEGQDKIYYLTADSYAAAKNSPHLEQFKAKGLEVILMFDRIDEWLMN HHHHHHHHHHHHHHCCCCEEEEEECCCHHHCCCCCCHHHHHHCCCEEEEHHHHHHHHHHH YLTEFDGKQFQSITKAGLDLSQFEDEQEKEKQKETEQEFQSVVERTKSYLGDRVKEVRTT HHHHCCCHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FKLANTPAVVVTDDFEMGTQMAKLLAAAGQAVPEVKYIFEINPNHTLVKQMADEADEEAF HHCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHCCHHHH GRWVEVLLGQAMLAERGSMEDPSQFLTAINSLLTKG HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA