| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is ybeL [H]
Identifier: 37679096
GI number: 37679096
Start: 915738
End: 916208
Strand: Direct
Name: ybeL [H]
Synonym: VV0912
Alternate gene names: 37679096
Gene position: 915738-916208 (Clockwise)
Preceding gene: 37679082
Following gene: 37679102
Centisome position: 27.3
GC content: 43.95
Gene sequence:
>471_bases ATGCCGAAACGTAAATCCGGTTATGAAGAAATGTTGGAAGATGTCATCGAGACACTCAAACATAGCCCAGATGAAGTGAA CAACGTCCTAGAAACATCTGGCAAGGTGATATCAGCGGCGAATGATATGACCAAAGATGAGTTGGCGTTGATCTCTGCGT ACGTAAAAGCGGACTTAAAAGAGTTTGCCGACAACTATGAAGAGAGCAAAAGTGGACCTTTTTACCTCACCATTGCCGAT TCTATTTGGCAAGGTTTGCTCGAAATTACTGACAGAACCAAAGTGGAATGGGTTGAACTGTTTGAAGATCTTGAACATCA AGGTCTTTACGAAGCGGGAGAGGTGATAGGGCTTGGTGTGTTGGTGTGTGATGAATGTGGCCATAAAACCTCCTACAATC ATCCAACCGTGATCATTCCTTGTATCAAATGTGGTCATAAGGGCTTTAGCCGCCAAGCGTTGAAACCGTAA
Upstream 100 bases:
>100_bases AATTTGTGAGTTCGGTTAGAACAGATTGAAATAGATCGTCATAGAATACCTAAAGGTACCGTGCACAACAATAGCCAATC TTTACAGATGGAGGACTGCC
Downstream 100 bases:
>100_bases TCACGCTCTTTTTGCTCACGTGAGAAACAGAAAAGGTACGCATTGCGTACCTTTTGTTTTTTGCCCATCTGTGCTTGCGC TTTTCGCAACGGGTTTTCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 156; Mature: 155
Protein sequence:
>156_residues MPKRKSGYEEMLEDVIETLKHSPDEVNNVLETSGKVISAANDMTKDELALISAYVKADLKEFADNYEESKSGPFYLTIAD SIWQGLLEITDRTKVEWVELFEDLEHQGLYEAGEVIGLGVLVCDECGHKTSYNHPTVIIPCIKCGHKGFSRQALKP
Sequences:
>Translated_156_residues MPKRKSGYEEMLEDVIETLKHSPDEVNNVLETSGKVISAANDMTKDELALISAYVKADLKEFADNYEESKSGPFYLTIAD SIWQGLLEITDRTKVEWVELFEDLEHQGLYEAGEVIGLGVLVCDECGHKTSYNHPTVIIPCIKCGHKGFSRQALKP >Mature_155_residues PKRKSGYEEMLEDVIETLKHSPDEVNNVLETSGKVISAANDMTKDELALISAYVKADLKEFADNYEESKSGPFYLTIADS IWQGLLEITDRTKVEWVELFEDLEHQGLYEAGEVIGLGVLVCDECGHKTSYNHPTVIIPCIKCGHKGFSRQALKP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786863, Length=160, Percent_Identity=36.25, Blast_Score=120, Evalue=4e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009912 [H]
Pfam domain/function: PF07295 DUF1451 [H]
EC number: NA
Molecular weight: Translated: 17464; Mature: 17333
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKRKSGYEEMLEDVIETLKHSPDEVNNVLETSGKVISAANDMTKDELALISAYVKADLK CCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHH EFADNYEESKSGPFYLTIADSIWQGLLEITDRTKVEWVELFEDLEHQGLYEAGEVIGLGV HHHHHHHHCCCCCEEEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHH LVCDECGHKTSYNHPTVIIPCIKCGHKGFSRQALKP HHCCCCCCCCCCCCCEEEEECHHHCCCCCCCCCCCC >Mature Secondary Structure PKRKSGYEEMLEDVIETLKHSPDEVNNVLETSGKVISAANDMTKDELALISAYVKADLK CCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHH EFADNYEESKSGPFYLTIADSIWQGLLEITDRTKVEWVELFEDLEHQGLYEAGEVIGLGV HHHHHHHHCCCCCEEEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHH LVCDECGHKTSYNHPTVIIPCIKCGHKGFSRQALKP HHCCCCCCCCCCCCCEEEEECHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]