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The map label for this gene is yicO [H]

Identifier: 37679038

GI number: 37679038

Start: 859644

End: 860486

Strand: Direct

Name: yicO [H]

Synonym: VV0854

Alternate gene names: 37679038

Gene position: 859644-860486 (Clockwise)

Preceding gene: 37679037

Following gene: 37679039

Centisome position: 25.63

GC content: 49.35

Gene sequence:

>843_bases
ATGCAGGCATTGTTGTTGATAATCCTGCGACGTTTGTTTCTCTTGGCGATATCACTTCTCTCGCACCAGCGTCTGGCGGC
TTTTGGTTTCTTTTTGACTATTGCACTTGTTCACCGTGGTGTGAAAGGGGCAGTAATGATTGCGATCTTAGCTGTGACGG
CACTTGGTTTGGTGTTTGGTGATGTCCAATGGGCGGGTGTGATGTCAACCCCACCAAGTATTGCGCCTACGTTCATGCAA
CTGGACTTCTCTGCGGTATTTGAAGTAGGCATGATTTCAGTGGTGTTTGCTTTCTTGTTCGTTGACTTGTTCGACACGGC
GGGCACGCTCGTGGGTGTTGCAACCAAAGCGAATCTGATTGAGAAAGATGGCAAACTGCCACGTTTGAACAAAGCACTGC
TTGCTGACTCAACAGCGACTTCTGTAGGTGCGCTACTAGGGACATCAAACACAACGTCTTACATCGAAAGTGTCTCTGGT
GTGGCGGCTGGTGGCCGTACCGGTTTAACAGCGGTTGTCGTGGGTGTGCTATTCCTATTGGCACTGTTCTTCTCACCACT
GGCAGGCATGATTCCCGCGTACGCAACAGCGGGTGCCCTGTTCTACGTGGCAATTTTGATGCTTTCTGGATTGGTCAGCA
TTGATTGGCGCGACTTAACCGAGGCGGCTCCTGTTGTTGTGACATGCTTGCTGATGCCACTGACTTTCTCGATTGCCGAA
GGGATTTCTTTAGGTTTCATTGCGTACGCTGCCATTAAATTGTTCAGCGGAAAAGGGCGTGATGTTTCACTCAGCGTCTG
GATTATGTCGGCTATTTTTATCATCAAGTATCTGGTGGCTTAA

Upstream 100 bases:

>100_bases
TTCAAAATTCGTGAGTGGATCATCAACTCGATTCCGCTCTCTTTGAGAACGGGGATCTCAGCGGGTATCGGCTTGTTCCT
TGCGTTCATCGCTCTGAAAA

Downstream 100 bases:

>100_bases
ATAGCTTTTAGAGTTGCGTTCCGGTAGAATAATCGTTTGCGCAGCTCGATACCCAAACTTTCTGTTACGTTTCGGGCTCT
CATCTTTATGAGAGCCTGTT

Product: xanthine/uracil permease family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MQALLLIILRRLFLLAISLLSHQRLAAFGFFLTIALVHRGVKGAVMIAILAVTALGLVFGDVQWAGVMSTPPSIAPTFMQ
LDFSAVFEVGMISVVFAFLFVDLFDTAGTLVGVATKANLIEKDGKLPRLNKALLADSTATSVGALLGTSNTTSYIESVSG
VAAGGRTGLTAVVVGVLFLLALFFSPLAGMIPAYATAGALFYVAILMLSGLVSIDWRDLTEAAPVVVTCLLMPLTFSIAE
GISLGFIAYAAIKLFSGKGRDVSLSVWIMSAIFIIKYLVA

Sequences:

>Translated_280_residues
MQALLLIILRRLFLLAISLLSHQRLAAFGFFLTIALVHRGVKGAVMIAILAVTALGLVFGDVQWAGVMSTPPSIAPTFMQ
LDFSAVFEVGMISVVFAFLFVDLFDTAGTLVGVATKANLIEKDGKLPRLNKALLADSTATSVGALLGTSNTTSYIESVSG
VAAGGRTGLTAVVVGVLFLLALFFSPLAGMIPAYATAGALFYVAILMLSGLVSIDWRDLTEAAPVVVTCLLMPLTFSIAE
GISLGFIAYAAIKLFSGKGRDVSLSVWIMSAIFIIKYLVA
>Mature_280_residues
MQALLLIILRRLFLLAISLLSHQRLAAFGFFLTIALVHRGVKGAVMIAILAVTALGLVFGDVQWAGVMSTPPSIAPTFMQ
LDFSAVFEVGMISVVFAFLFVDLFDTAGTLVGVATKANLIEKDGKLPRLNKALLADSTATSVGALLGTSNTTSYIESVSG
VAAGGRTGLTAVVVGVLFLLALFFSPLAGMIPAYATAGALFYVAILMLSGLVSIDWRDLTEAAPVVVTCLLMPLTFSIAE
GISLGFIAYAAIKLFSGKGRDVSLSVWIMSAIFIIKYLVA

Specific function: Unknown

COG id: COG2252

COG function: function code R; Permeases

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the xanthine/uracil permease family. AzgA purine transporter (TC 2.A.1.40) subfamily [H]

Homologues:

Organism=Escherichia coli, GI87082309, Length=252, Percent_Identity=48.4126984126984, Blast_Score=257, Evalue=5e-70,
Organism=Escherichia coli, GI1790150, Length=260, Percent_Identity=48.8461538461538, Blast_Score=245, Evalue=3e-66,
Organism=Escherichia coli, GI1790499, Length=254, Percent_Identity=36.6141732283465, Blast_Score=147, Evalue=9e-37,
Organism=Escherichia coli, GI48994909, Length=198, Percent_Identity=39.3939393939394, Blast_Score=135, Evalue=3e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006043 [H]

Pfam domain/function: PF00860 Xan_ur_permease [H]

EC number: NA

Molecular weight: Translated: 29432; Mature: 29432

Theoretical pI: Translated: 9.02; Mature: 9.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHC
>Mature Secondary Structure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CCHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7686882; 9278503 [H]