| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is yfjG [C]
Identifier: 37679003
GI number: 37679003
Start: 824013
End: 824522
Strand: Direct
Name: yfjG [C]
Synonym: VV0819
Alternate gene names: 37679003
Gene position: 824013-824522 (Clockwise)
Preceding gene: 37679000
Following gene: 37679004
Centisome position: 24.56
GC content: 45.69
Gene sequence:
>510_bases ATGCTTTTGTTTGCGCTGGCTCAGAATAACAGTAAAATTGTTTGGCGCTTTGAAATGAAAGCTGTGAGAGGAGAGTCTAT GAAGCAAGTCACCCGGTCTGCATTGGTATCGTTTAGTGCAGAACAGATGTATGCCCTAGTGAATGATGTGGCAAAGTACC CTGAATTTTTGCCAGGTTGTTCTGGGAGCCGAGTGATCGAGGCGTCGGACTCCAACATGGTCGCATCGGTAGATGTGGCA AAGGCCGGTATCAGCAAAACGTTCACCACCGCAAATCATCTTGTTCCAGGTGAAGCGATCATGATGACGCTGGTCGATGG CCCCTTTAAAACCCTCAAAGGAGGGTGGTTTTTTACTGCCTTAGATGAACAAGCGTGCAAAGTTGAGTTAAAGCTGGAGT TTGAGTTTTCAAGCAAGATGATTGAGCTCGCCTTTGGCAAAATCTTTAATGAGCTGACCAATAATATGGTCAATGCATTT ACTCAGCGTGCGAAGCAGGTGTATTTATGA
Upstream 100 bases:
>100_bases AGCTTTTTTGTTCAGCGCGATAGTGTTGCTACCCGCTTTTGGTTTTGAATTTTTCTTTGCCATAGTGAGGCCATTATACG GTGTGCAACTTTGATAGGAA
Downstream 100 bases:
>100_bases GTATTGAATCTGAGATGATCCACGTTGAGGTGGTTTATGCTTTACCTCAGGAACAACGTGTATTAACCCTTGTGGTGAAC CAACAAGCGACGGTGGAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 169; Mature: 169
Protein sequence:
>169_residues MLLFALAQNNSKIVWRFEMKAVRGESMKQVTRSALVSFSAEQMYALVNDVAKYPEFLPGCSGSRVIEASDSNMVASVDVA KAGISKTFTTANHLVPGEAIMMTLVDGPFKTLKGGWFFTALDEQACKVELKLEFEFSSKMIELAFGKIFNELTNNMVNAF TQRAKQVYL
Sequences:
>Translated_169_residues MLLFALAQNNSKIVWRFEMKAVRGESMKQVTRSALVSFSAEQMYALVNDVAKYPEFLPGCSGSRVIEASDSNMVASVDVA KAGISKTFTTANHLVPGEAIMMTLVDGPFKTLKGGWFFTALDEQACKVELKLEFEFSSKMIELAFGKIFNELTNNMVNAF TQRAKQVYL >Mature_169_residues MLLFALAQNNSKIVWRFEMKAVRGESMKQVTRSALVSFSAEQMYALVNDVAKYPEFLPGCSGSRVIEASDSNMVASVDVA KAGISKTFTTANHLVPGEAIMMTLVDGPFKTLKGGWFFTALDEQACKVELKLEFEFSSKMIELAFGKIFNELTNNMVNAF TQRAKQVYL
Specific function: Unknown
COG id: COG2867
COG function: function code I; Oligoketide cyclase/lipid transport protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0083 family [H]
Homologues:
Organism=Escherichia coli, GI1788972, Length=142, Percent_Identity=62.6760563380282, Blast_Score=203, Evalue=5e-54,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005031 [H]
Pfam domain/function: PF03364 Polyketide_cyc [H]
EC number: NA
Molecular weight: Translated: 18772; Mature: 18772
Theoretical pI: Translated: 8.20; Mature: 8.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLFALAQNNSKIVWRFEMKAVRGESMKQVTRSALVSFSAEQMYALVNDVAKYPEFLPGC CEEEEEECCCCEEEEEEEEEHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCC SGSRVIEASDSNMVASVDVAKAGISKTFTTANHLVPGEAIMMTLVDGPFKTLKGGWFFTA CCCEEEEECCCCEEEEEHHHHHCCCHHHHHHCCCCCCHHEEEEECCCCHHHHCCCEEEEE LDEQACKVELKLEFEFSSKMIELAFGKIFNELTNNMVNAFTQRAKQVYL ECCCCEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLLFALAQNNSKIVWRFEMKAVRGESMKQVTRSALVSFSAEQMYALVNDVAKYPEFLPGC CEEEEEECCCCEEEEEEEEEHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCC SGSRVIEASDSNMVASVDVAKAGISKTFTTANHLVPGEAIMMTLVDGPFKTLKGGWFFTA CCCEEEEECCCCEEEEEHHHHHCCCHHHHHHCCCCCCHHEEEEECCCCHHHHCCCEEEEE LDEQACKVELKLEFEFSSKMIELAFGKIFNELTNNMVNAFTQRAKQVYL ECCCCEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA