| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is 37678976
Identifier: 37678976
GI number: 37678976
Start: 797791
End: 798345
Strand: Direct
Name: 37678976
Synonym: VV0792
Alternate gene names: NA
Gene position: 797791-798345 (Clockwise)
Preceding gene: 37678975
Following gene: 37678977
Centisome position: 23.78
GC content: 50.63
Gene sequence:
>555_bases ATGTTAATGATTGCCAAATCAGATAACCAACAAGCCAGAATGGTGATGAGTTATCCCGCGGTTGTGCAGGGGTGTTTAGA AACCCTTGAACAAGCACAGCAGTTTTTACTCGATATTGAAGATCGTCATTATGTGACACCCGCGGCCCCGTACGTAAGCA GCAGTATTGGAGAACATTTTCGTCATTGGTTAGATATTTTTCATGCGATTCGCTTAGCCAGTGAAGAGATTGACTACAAC CAACGTCGCCGTGGTCACGCTGTTGAGCACTCTATCGAACAGGCGCAAGCAGAAATCGCACAGCTCACGACGTGGCTAGG GAATTTGAGCGCCGAAGCGGCAGTGATGAAAGTCTCCGTGACCAGTGAAGTGACGCTCTATCAAACTCGGATTGCAGAGA TGCAATCAACCCTTGAGCGAGAGTTGGCTTTCGCGGCGCTGCACGCCAACCATCATTTCGCTATGGCCAAAGTGGCGGCG CAGGTGATGCAAGTGGAAACCAATAGCGCGTTTGGCATTGCCCCAGCCACCGCGACTTACATCCGAGGCGAATAG
Upstream 100 bases:
>100_bases GCCGAAAATCCGTGAATTGCTTCGCGCTTGGCAAACTGAGCGTCAATTAGTTCGTCAGTATCCCGCTACCGATTAGCCCC CCATTGTTAGGAATTTCCTT
Downstream 100 bases:
>100_bases CATGTGTTCGGTGACTTGGCTTATAGAGCCTGATGGCTATCAACTGTTTTTTAATCGTGATGAGCAAAAGGCAAGGCCAT TGGCGTTGCCCCCTCAGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 184; Mature: 184
Protein sequence:
>184_residues MLMIAKSDNQQARMVMSYPAVVQGCLETLEQAQQFLLDIEDRHYVTPAAPYVSSSIGEHFRHWLDIFHAIRLASEEIDYN QRRRGHAVEHSIEQAQAEIAQLTTWLGNLSAEAAVMKVSVTSEVTLYQTRIAEMQSTLERELAFAALHANHHFAMAKVAA QVMQVETNSAFGIAPATATYIRGE
Sequences:
>Translated_184_residues MLMIAKSDNQQARMVMSYPAVVQGCLETLEQAQQFLLDIEDRHYVTPAAPYVSSSIGEHFRHWLDIFHAIRLASEEIDYN QRRRGHAVEHSIEQAQAEIAQLTTWLGNLSAEAAVMKVSVTSEVTLYQTRIAEMQSTLERELAFAALHANHHFAMAKVAA QVMQVETNSAFGIAPATATYIRGE >Mature_184_residues MLMIAKSDNQQARMVMSYPAVVQGCLETLEQAQQFLLDIEDRHYVTPAAPYVSSSIGEHFRHWLDIFHAIRLASEEIDYN QRRRGHAVEHSIEQAQAEIAQLTTWLGNLSAEAAVMKVSVTSEVTLYQTRIAEMQSTLERELAFAALHANHHFAMAKVAA QVMQVETNSAFGIAPATATYIRGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20588; Mature: 20588
Theoretical pI: Translated: 5.77; Mature: 5.77
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLMIAKSDNQQARMVMSYPAVVQGCLETLEQAQQFLLDIEDRHYVTPAAPYVSSSIGEHF CEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHH RHWLDIFHAIRLASEEIDYNQRRRGHAVEHSIEQAQAEIAQLTTWLGNLSAEAAVMKVSV HHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEEEC TSEVTLYQTRIAEMQSTLERELAFAALHANHHFAMAKVAAQVMQVETNSAFGIAPATATY CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHE IRGE ECCC >Mature Secondary Structure MLMIAKSDNQQARMVMSYPAVVQGCLETLEQAQQFLLDIEDRHYVTPAAPYVSSSIGEHF CEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHH RHWLDIFHAIRLASEEIDYNQRRRGHAVEHSIEQAQAEIAQLTTWLGNLSAEAAVMKVSV HHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEEEC TSEVTLYQTRIAEMQSTLERELAFAALHANHHFAMAKVAAQVMQVETNSAFGIAPATATY CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHE IRGE ECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA