| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
Click here to switch to the map view.
The map label for this gene is 37678974
Identifier: 37678974
GI number: 37678974
Start: 796013
End: 796642
Strand: Direct
Name: 37678974
Synonym: VV0790
Alternate gene names: NA
Gene position: 796013-796642 (Clockwise)
Preceding gene: 37678971
Following gene: 37678975
Centisome position: 23.73
GC content: 47.62
Gene sequence:
>630_bases ATGCATTTCAAATATGACATTTGGCTTCATGGAGGGGAAATGTTGGCCGCCTATATCCAAGAAATATTGAGCTTACATCT GAGCTCGCCGCTGTGGCTGTTTATTGGCATCGTGCTGGTTTCCTATCTCTTGGAAGATCTTGCCATCGTGCTGGCCGCAG GGTTAGCCGTGGAAGGTTACCTCCCTTCTTTGGTTGCCATCGTTGCCATTTTTGTCGGTATTACTACTGGCGATTTAGCG CTCTATTGGTTGGGCAAATATGGTCAAAGTGTCCGTTTTTTGCGTTATCACACGCTCAAGCATAAAGCGTTTCGCCAGGT GAGAGGGCGTATTCAAAGTAAGGCTTTTGTGAGTTTGTTTGTGATTCGTTTTATTCCTGGATTGCGCACCTTAGGTTACA CCCTAAGTGGTTATTGCCTCGTGCCGATGCGTGTTTTTTTGTTGGCGGTCATACTCGCCAGCGCGCTCTGGGTCGGGAGT GTGTTTGGGTCGGTGTACTGGTTAGGTAGCCAAGCTTTCTTGGCGCAAAGCTCATGGCTTTGGTGGTGGGTGTTAGGCGC ATTTTTACTGCTGACCGTTATGAATCGTGTCGTGAGCCAGTCTTGGTCAAAAGGAAAAATATCAATATGA
Upstream 100 bases:
>100_bases CAGCAGAGCAAAACTGCGGACCTAGCTCTGCCTTATCATTCGCCTATTTTTCTTCAATGCGTAATTTTTTTCATCCCCTT CCGGTCTATTCAAGCAGCTT
Downstream 100 bases:
>100_bases ATCGAGCCATTGAAATGATTGAACAAGGCCGAGTGAATGCGGGAATGCCGTTGTTAAGTCAATCACCCAAGCGTGAGATT TCACCTTATGAGTTTCTACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 209; Mature: 209
Protein sequence:
>209_residues MHFKYDIWLHGGEMLAAYIQEILSLHLSSPLWLFIGIVLVSYLLEDLAIVLAAGLAVEGYLPSLVAIVAIFVGITTGDLA LYWLGKYGQSVRFLRYHTLKHKAFRQVRGRIQSKAFVSLFVIRFIPGLRTLGYTLSGYCLVPMRVFLLAVILASALWVGS VFGSVYWLGSQAFLAQSSWLWWWVLGAFLLLTVMNRVVSQSWSKGKISI
Sequences:
>Translated_209_residues MHFKYDIWLHGGEMLAAYIQEILSLHLSSPLWLFIGIVLVSYLLEDLAIVLAAGLAVEGYLPSLVAIVAIFVGITTGDLA LYWLGKYGQSVRFLRYHTLKHKAFRQVRGRIQSKAFVSLFVIRFIPGLRTLGYTLSGYCLVPMRVFLLAVILASALWVGS VFGSVYWLGSQAFLAQSSWLWWWVLGAFLLLTVMNRVVSQSWSKGKISI >Mature_209_residues MHFKYDIWLHGGEMLAAYIQEILSLHLSSPLWLFIGIVLVSYLLEDLAIVLAAGLAVEGYLPSLVAIVAIFVGITTGDLA LYWLGKYGQSVRFLRYHTLKHKAFRQVRGRIQSKAFVSLFVIRFIPGLRTLGYTLSGYCLVPMRVFLLAVILASALWVGS VFGSVYWLGSQAFLAQSSWLWWWVLGAFLLLTVMNRVVSQSWSKGKISI
Specific function: Unknown
COG id: COG0586
COG function: function code S; Uncharacterized membrane-associated protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23505; Mature: 23505
Theoretical pI: Translated: 10.20; Mature: 10.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHFKYDIWLHGGEMLAAYIQEILSLHLSSPLWLFIGIVLVSYLLEDLAIVLAAGLAVEGY CCEEEEEEEECHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LPSLVAIVAIFVGITTGDLALYWLGKYGQSVRFLRYHTLKHKAFRQVRGRIQSKAFVSLF HHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VIRFIPGLRTLGYTLSGYCLVPMRVFLLAVILASALWVGSVFGSVYWLGSQAFLAQSSWL HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHH WWWVLGAFLLLTVMNRVVSQSWSKGKISI HHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MHFKYDIWLHGGEMLAAYIQEILSLHLSSPLWLFIGIVLVSYLLEDLAIVLAAGLAVEGY CCEEEEEEEECHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LPSLVAIVAIFVGITTGDLALYWLGKYGQSVRFLRYHTLKHKAFRQVRGRIQSKAFVSLF HHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VIRFIPGLRTLGYTLSGYCLVPMRVFLLAVILASALWVGSVFGSVYWLGSQAFLAQSSWL HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHH WWWVLGAFLLLTVMNRVVSQSWSKGKISI HHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA