| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is iscX [H]
Identifier: 37678945
GI number: 37678945
Start: 765565
End: 765780
Strand: Direct
Name: iscX [H]
Synonym: VV0761
Alternate gene names: 37678945
Gene position: 765565-765780 (Clockwise)
Preceding gene: 37678944
Following gene: 37678946
Centisome position: 22.82
GC content: 41.2
Gene sequence:
>216_bases ATGTTTCAAAGGAAGATGAGTATGAAATGGACAGATTCACGTGATATCGCCATCGAGCTCTGCGAACGATTTCCAGATAT GGATCCAAAAACGGTGCGTTTTACCGATCTGCATCAGTGGATTTTAGAGATTGAAGATTTTGATGATGAGCCCAATCATT CCAATGAAAAGATCCTCGAAGCGGTGATTCTTTGCTGGTTGGATGAATGGGAATAA
Upstream 100 bases:
>100_bases TCCAAAATACACGCTAAACCACGCATCGGAAGACCATTAATCGATGTGTCGCGCAGTTTGCTGGGTCTTTTGACTTAGTG AACTGGTACTGAAGTGACGA
Downstream 100 bases:
>100_bases ATCCAGCCGAGTTAACAAAATTCATCAAAAAAAGCGGACCTTTTGGTCCGTTTTTTTATCAATTTGACATTTCTACCCTA CATAATGCTAACATCCGTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 71; Mature: 71
Protein sequence:
>71_residues MFQRKMSMKWTDSRDIAIELCERFPDMDPKTVRFTDLHQWILEIEDFDDEPNHSNEKILEAVILCWLDEWE
Sequences:
>Translated_71_residues MFQRKMSMKWTDSRDIAIELCERFPDMDPKTVRFTDLHQWILEIEDFDDEPNHSNEKILEAVILCWLDEWE >Mature_71_residues MFQRKMSMKWTDSRDIAIELCERFPDMDPKTVRFTDLHQWILEIEDFDDEPNHSNEKILEAVILCWLDEWE
Specific function: May function as iron donor in the assembly of iron- sulfur clusters [H]
COG id: COG2975
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the iscX family [H]
Homologues:
Organism=Escherichia coli, GI1788873, Length=66, Percent_Identity=66.6666666666667, Blast_Score=97, Evalue=2e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007479 [H]
Pfam domain/function: PF04384 DUF528 [H]
EC number: NA
Molecular weight: Translated: 8731; Mature: 8731
Theoretical pI: Translated: 4.12; Mature: 4.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 8.5 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 8.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFQRKMSMKWTDSRDIAIELCERFPDMDPKTVRFTDLHQWILEIEDFDDEPNHSNEKILE CCCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHCCCCCCCCCHHHHHH AVILCWLDEWE HHHHHHHCCCC >Mature Secondary Structure MFQRKMSMKWTDSRDIAIELCERFPDMDPKTVRFTDLHQWILEIEDFDDEPNHSNEKILE CCCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHCCCCCCCCCHHHHHH AVILCWLDEWE HHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]