Definition Vibrio vulnificus YJ016 chromosome I, complete sequence.
Accession NC_005139
Length 3,354,505

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The map label for this gene is 37678840

Identifier: 37678840

GI number: 37678840

Start: 652598

End: 653167

Strand: Direct

Name: 37678840

Synonym: VV0656

Alternate gene names: NA

Gene position: 652598-653167 (Clockwise)

Preceding gene: 37678839

Following gene: 37678842

Centisome position: 19.45

GC content: 44.91

Gene sequence:

>570_bases
GTGTTAAGGAGAAACGCTATGATGATTGAACGGATAAGACGCGAACACGGTTACATTGTGCGCATGCTCGCTATACTGCG
CCATAAAGTGGAGTTGCTCAAAAATGAGCAACCTATTAACTACAGTTTGGTCGCCGAGATTGTCAGCTATTTATCTGATC
ATGCGGAGAAGGTGCACCATCCGAAAGAAGACATCCTTTATCGCCATTACTTAGAGCATTACGGCGCGCAGAGAACCATT
GAAAACTTAGAGCTTGAACACAAAGAACTAGCGAAGAAAACCGCAGCTTTTGCTGACGTGATGCATATGATTTTGAACGA
TGCAGTGGTGCCACAAGCGATGTTCATTGAGCAGTTAGAGGCGTTTATCTCATCACAACGCCAACATTTGGACATTGAAG
AGCGCTTGATTCTGCCATTGATCGCCGAGTCTTTTACCACACAAGATTGGCAACAAGTGGAATCGCAATGGCTGGTTAAT
GAAGACGATCCAGTCTTTGGTGAAACCATTGCCGATCATTACCGACAACTGGCAGAGCGTGTACAGCAAAGTGAAAAAGA
GATGATCTAG

Upstream 100 bases:

>100_bases
GCTCTAAGCACATTTGAATGTAATTTCGTAGAAAACGATGGTTTTTTGAGCGATATCTAAGCCGAATGGCGTTCTATCTT
ATACACTTACAACAAATGAG

Downstream 100 bases:

>100_bases
CCCAAAATAAACAAAGGCACCTGTGAGCGGTGCCTTTTTCGTTGAGTAAGAGTGCTATTTTTTGTTCGTTAATGTGGTTA
AAGCTTAATATCTTCCAGTG

Product: hypothetical protein

Products: NA

Alternate protein names: Hemerythrin Family Protein

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MLRRNAMMIERIRREHGYIVRMLAILRHKVELLKNEQPINYSLVAEIVSYLSDHAEKVHHPKEDILYRHYLEHYGAQRTI
ENLELEHKELAKKTAAFADVMHMILNDAVVPQAMFIEQLEAFISSQRQHLDIEERLILPLIAESFTTQDWQQVESQWLVN
EDDPVFGETIADHYRQLAERVQQSEKEMI

Sequences:

>Translated_189_residues
MLRRNAMMIERIRREHGYIVRMLAILRHKVELLKNEQPINYSLVAEIVSYLSDHAEKVHHPKEDILYRHYLEHYGAQRTI
ENLELEHKELAKKTAAFADVMHMILNDAVVPQAMFIEQLEAFISSQRQHLDIEERLILPLIAESFTTQDWQQVESQWLVN
EDDPVFGETIADHYRQLAERVQQSEKEMI
>Mature_189_residues
MLRRNAMMIERIRREHGYIVRMLAILRHKVELLKNEQPINYSLVAEIVSYLSDHAEKVHHPKEDILYRHYLEHYGAQRTI
ENLELEHKELAKKTAAFADVMHMILNDAVVPQAMFIEQLEAFISSQRQHLDIEERLILPLIAESFTTQDWQQVESQWLVN
EDDPVFGETIADHYRQLAERVQQSEKEMI

Specific function: Unknown

COG id: COG3945

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22427; Mature: 22427

Theoretical pI: Translated: 5.52; Mature: 5.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRRNAMMIERIRREHGYIVRMLAILRHKVELLKNEQPINYSLVAEIVSYLSDHAEKVHH
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCC
PKEDILYRHYLEHYGAQRTIENLELEHKELAKKTAAFADVMHMILNDAVVPQAMFIEQLE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFISSQRQHLDIEERLILPLIAESFTTQDWQQVESQWLVNEDDPVFGETIADHYRQLAER
HHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
VQQSEKEMI
HHHHHHCCC
>Mature Secondary Structure
MLRRNAMMIERIRREHGYIVRMLAILRHKVELLKNEQPINYSLVAEIVSYLSDHAEKVHH
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCC
PKEDILYRHYLEHYGAQRTIENLELEHKELAKKTAAFADVMHMILNDAVVPQAMFIEQLE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFISSQRQHLDIEERLILPLIAESFTTQDWQQVESQWLVNEDDPVFGETIADHYRQLAER
HHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
VQQSEKEMI
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA