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The map label for this gene is yhcC [H]

Identifier: 37678826

GI number: 37678826

Start: 636236

End: 637228

Strand: Direct

Name: yhcC [H]

Synonym: VV0642

Alternate gene names: 37678826

Gene position: 636236-637228 (Clockwise)

Preceding gene: 37678813

Following gene: 37678827

Centisome position: 18.97

GC content: 47.73

Gene sequence:

>993_bases
GTGAGATTGATTGCGGTTTACAATTGGTGGTTTTCAATGCAATTACATGAGCTAGTGAATACGATTGGTCAGGATCTTCA
GCGCCGATATGGAGAAAAAGTGCATAAATTGACGCTTCATGGAGGGTTTAGCTGTCCAAACCGTGATGGCACGATCGGCC
GTGGTGGTTGTACTTTCTGCAATGTGGCGTCGTTCGCTGATGAGCAAGCTCAAGTCAAAAGTATTCGAGAGCAATTGACT
GAGCGAGCTGGAGAAGTGCATCGTGCGAAGAAGTACTTAGCCTATTTTCAAGCTTACACCAGCACCTATGCTGAAGTGCA
GGTGCTGAAAAACATGTATGAAGAGGCGTTGAAAGCCGCGGATATTGTCGGTCTTTGTGTCGGGACTCGCCCAGATTGTG
TACCAGATGCGGTGTTAGACTTGCTCTCGGATTACGTGCAGCAAGGTTATGAAATTTGGTTGGAGTTGGGGCTGCAAACG
GCCAGCAATGACACCTTAAAGCGGATCAATCGTGGACACGATTTTGAATGCTATGCAGAGATCACCCAGCGAGCCCGTGC
GTTGGGCATCAAAGTATGTACGCATTTGATCGTTGGGTTACCAAAAGAGTCTCGAGACGATAACTTTACCACCTTGGAAA
AAGTGATTGAGGTCGGTACGGATGGCATCAAGTTACATGGTTTGCATATTGTTGAAGGTAGTACCATGGCCAAAGCTTGG
CGTGCGGGTAAGTTGGATGCACCAGAATTGGAGCAATATGTCGAGATTGCCTGCGAAATGATTCGCCGAACACCGCCAGA
GGTGATTTTCCACCGAGTCTCTTCAGCCGCTCGTCGTCCGACATTGCTATCACCTTTATGGTGTGAAAATCGTTGGTTAG
CCATGACTGAAATCGGTCAATACCTTGCTCAGCATGGCGGACAGGGCAGTGCGCTTGGCCATTCTTTTGTCTATACTAAA
CCGCAATTAAAAAGCGGAATTCACCCTCAATAG

Upstream 100 bases:

>100_bases
TATGCATGTTTATTGATTTTTGCCATGAAAAGCTTCGTTTGAATTCACTAAAATTTTGTGTTTTTTCTTGCAGGTGTGTA
ATTAATTTACATAAACCGTA

Downstream 100 bases:

>100_bases
TTGGTATAGTCGCCGCACACACAATTCATCTAAGAGTGAGAATGGACAAGCAGTTTGCATGGATAGCACACCTCGCAGAG
CATTACGGCGCGATTATTTT

Product: Fe-S oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 330; Mature: 330

Protein sequence:

>330_residues
MRLIAVYNWWFSMQLHELVNTIGQDLQRRYGEKVHKLTLHGGFSCPNRDGTIGRGGCTFCNVASFADEQAQVKSIREQLT
ERAGEVHRAKKYLAYFQAYTSTYAEVQVLKNMYEEALKAADIVGLCVGTRPDCVPDAVLDLLSDYVQQGYEIWLELGLQT
ASNDTLKRINRGHDFECYAEITQRARALGIKVCTHLIVGLPKESRDDNFTTLEKVIEVGTDGIKLHGLHIVEGSTMAKAW
RAGKLDAPELEQYVEIACEMIRRTPPEVIFHRVSSAARRPTLLSPLWCENRWLAMTEIGQYLAQHGGQGSALGHSFVYTK
PQLKSGIHPQ

Sequences:

>Translated_330_residues
MRLIAVYNWWFSMQLHELVNTIGQDLQRRYGEKVHKLTLHGGFSCPNRDGTIGRGGCTFCNVASFADEQAQVKSIREQLT
ERAGEVHRAKKYLAYFQAYTSTYAEVQVLKNMYEEALKAADIVGLCVGTRPDCVPDAVLDLLSDYVQQGYEIWLELGLQT
ASNDTLKRINRGHDFECYAEITQRARALGIKVCTHLIVGLPKESRDDNFTTLEKVIEVGTDGIKLHGLHIVEGSTMAKAW
RAGKLDAPELEQYVEIACEMIRRTPPEVIFHRVSSAARRPTLLSPLWCENRWLAMTEIGQYLAQHGGQGSALGHSFVYTK
PQLKSGIHPQ
>Mature_330_residues
MRLIAVYNWWFSMQLHELVNTIGQDLQRRYGEKVHKLTLHGGFSCPNRDGTIGRGGCTFCNVASFADEQAQVKSIREQLT
ERAGEVHRAKKYLAYFQAYTSTYAEVQVLKNMYEEALKAADIVGLCVGTRPDCVPDAVLDLLSDYVQQGYEIWLELGLQT
ASNDTLKRINRGHDFECYAEITQRARALGIKVCTHLIVGLPKESRDDNFTTLEKVIEVGTDGIKLHGLHIVEGSTMAKAW
RAGKLDAPELEQYVEIACEMIRRTPPEVIFHRVSSAARRPTLLSPLWCENRWLAMTEIGQYLAQHGGQGSALGHSFVYTK
PQLKSGIHPQ

Specific function: Unknown

COG id: COG1242

COG function: function code R; Predicted Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To M.jannaschii MJ0486 [H]

Homologues:

Organism=Homo sapiens, GI23510283, Length=198, Percent_Identity=26.2626262626263, Blast_Score=67, Evalue=3e-11,
Organism=Escherichia coli, GI2367204, Length=305, Percent_Identity=70.4918032786885, Blast_Score=456, Evalue=1e-129,
Organism=Caenorhabditis elegans, GI133955098, Length=166, Percent_Identity=25.9036144578313, Blast_Score=65, Evalue=4e-11,
Organism=Saccharomyces cerevisiae, GI6325171, Length=180, Percent_Identity=25, Blast_Score=65, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005911
- InterPro:   IPR006638
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 37125; Mature: 37125

Theoretical pI: Translated: 7.31; Mature: 7.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLIAVYNWWFSMQLHELVNTIGQDLQRRYGEKVHKLTLHGGFSCPNRDGTIGRGGCTFC
CEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCHH
NVASFADEQAQVKSIREQLTERAGEVHRAKKYLAYFQAYTSTYAEVQVLKNMYEEALKAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DIVGLCVGTRPDCVPDAVLDLLSDYVQQGYEIWLELGLQTASNDTLKRINRGHDFECYAE
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCHHHHHH
ITQRARALGIKVCTHLIVGLPKESRDDNFTTLEKVIEVGTDGIKLHGLHIVEGSTMAKAW
HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEEEECCCHHHHHH
RAGKLDAPELEQYVEIACEMIRRTPPEVIFHRVSSAARRPTLLSPLWCENRWLAMTEIGQ
HCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHH
YLAQHGGQGSALGHSFVYTKPQLKSGIHPQ
HHHHCCCCCCCCCCCEEEECHHHCCCCCCC
>Mature Secondary Structure
MRLIAVYNWWFSMQLHELVNTIGQDLQRRYGEKVHKLTLHGGFSCPNRDGTIGRGGCTFC
CEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCHH
NVASFADEQAQVKSIREQLTERAGEVHRAKKYLAYFQAYTSTYAEVQVLKNMYEEALKAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DIVGLCVGTRPDCVPDAVLDLLSDYVQQGYEIWLELGLQTASNDTLKRINRGHDFECYAE
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCHHHHHH
ITQRARALGIKVCTHLIVGLPKESRDDNFTTLEKVIEVGTDGIKLHGLHIVEGSTMAKAW
HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEEEECCCHHHHHH
RAGKLDAPELEQYVEIACEMIRRTPPEVIFHRVSSAARRPTLLSPLWCENRWLAMTEIGQ
HCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHH
YLAQHGGQGSALGHSFVYTKPQLKSGIHPQ
HHHHCCCCCCCCCCCEEEECHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]