Definition Vibrio vulnificus YJ016 chromosome I, complete sequence.
Accession NC_005139
Length 3,354,505

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The map label for this gene is hldE [H]

Identifier: 37678766

GI number: 37678766

Start: 565046

End: 566515

Strand: Direct

Name: hldE [H]

Synonym: VV0582

Alternate gene names: 37678766

Gene position: 565046-566515 (Clockwise)

Preceding gene: 37678765

Following gene: 37678768

Centisome position: 16.84

GC content: 50.48

Gene sequence:

>1470_bases
GTGTTACACTCAGCACAGCAAAAAAATTGGAGACCGAGAATGAAACCAATCCTACCTGATTACAACAATGCAGGTGTACT
GATCATTGGCGATGTGATGCTAGACCGTTACTGGTATGGCCCAACAAGTCGTATTTCACCAGAAGCCCCTGTACCTGTTG
TAAAAGTAGAGAACAATGAAGAGCGCCCAGGCGGAGCGGCAAACGTCGCAATGAACATTGCCTCGCTTGGTGGTCATGCG
CGCATTGTGGGTTTAACCGGGATGGATGAGCCAGCGAAAGTGCTGACCGAAACCCTGAATTCGTTAAAAGTAAAATGCGA
TTTTGTTGCGCTTCCTGAATACCCAACCATCACCAAACTGCGTGTGATGAGCCGTGGTCAGCAATTGATTCGCTTAGATT
TTGAAGACAAGTTTGAAGGCACCAATCCTGAGCTGGTCCTAACACGCATGGAGCGCGCTCTGCCTCACGTGCAGGCGGTG
ATTCTGTCTGATTATGCAAAAGGGGCGTTAGAGCACGTTGAAGCTTTGATCGCGAAAGCCCGTGCGGCCAATGTTCCCGT
GTTTATCGATCCGAAAGGCACCAACTTTGAACCTTATCGTGGCGCTACTCTGCTAACGCCAAACATGTCTGAGTTTGAGG
CGGTGGTCGGCAAAGTGACATCCGACGATGACTTGGTGGAAAAAGCATTAGGCTTGATTGAAAAGTTTGAACTTGGAGCG
CTGCTGGTGACGCGCAGTGAGCATGGCATGACATTGGTTCGTCCAGATCAGAAGCCATTCCACTTGCCAACTCAAGCCAA
AGAAGTGTACGACGTGACAGGTGCAGGCGATACGGTGATTTCTGTCTTAGCGGCCTCAGTTGCAGCAGGTAAACCGCTTG
ATGAAGCATGTGCATTGGCTAATGCGGCGGCGGGTGTCGTAGTCGGTAAGCTAGGTACTTCAACGTTATCGACCATCGAA
TTAGCAGAAGCCATTCATGGCAGCCGTGATACCGATTTCGGTGTGATTGCCGAAGCGGCACTGATTGATGCGGTGAAAGC
GGCGCAAGCTAAAGGCGAGAAAGTGGTCATGACTAATGGCTGCTTCGACATCCTTCATGCAGGCCATGTTTCTTACCTAA
ATAACGCAGCAAAATTGGGTGACCGCCTGATTGTTGCCGTGAATACCGATGAGTCGGTGAAACGCCTGAAAGGTCCTGGC
CGTCCTGTGAATCCAACCGATCGTCGTATGGCCGTGCTCGCCGGGCTCGGTGCTGTTGATTGGGTGGTGCCGTTTAGTGA
AGACACGCCACAACGTTTGATTTCAGAAGTGCTACCGGATCTGTTGGTTAAAGGCGGCGATTACAAGCCAGAAGATATCG
CTGGTGGCAAAGAAGTGATTGCTGCGGGCGGTGAAGTTAAAGTACTGAACTTTGAAGATGGCTGTTCAACCACAGAGATC
ATTGATGCAATCAAAGGCGGACGCGGTTAA

Upstream 100 bases:

>100_bases
CCGATGTCGCTCTCGATAAGTTTGTTGCGTTGCGCCAAGGGGTCAGCAAAGCTTGGCAAGAGTGGCTTGAATCCTCAACT
ATTTAGACCCGATAAAGGCT

Downstream 100 bases:

>100_bases
CCACATCGCTTTTCAATGAGCGGTACACATCATCAATATGAGACAAAAAAGGGTGACATTGCTGTCACCCTTTTCTTTAT
GCGTGTGTCTCTTTATGCGT

Product: bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase

Products: NA

Alternate protein names: D-beta-D-heptose 7-phosphate kinase; D-beta-D-heptose 7-phosphotransferase; D-beta-D-heptose 1-phosphate adenosyltransferase [H]

Number of amino acids: Translated: 489; Mature: 489

Protein sequence:

>489_residues
MLHSAQQKNWRPRMKPILPDYNNAGVLIIGDVMLDRYWYGPTSRISPEAPVPVVKVENNEERPGGAANVAMNIASLGGHA
RIVGLTGMDEPAKVLTETLNSLKVKCDFVALPEYPTITKLRVMSRGQQLIRLDFEDKFEGTNPELVLTRMERALPHVQAV
ILSDYAKGALEHVEALIAKARAANVPVFIDPKGTNFEPYRGATLLTPNMSEFEAVVGKVTSDDDLVEKALGLIEKFELGA
LLVTRSEHGMTLVRPDQKPFHLPTQAKEVYDVTGAGDTVISVLAASVAAGKPLDEACALANAAAGVVVGKLGTSTLSTIE
LAEAIHGSRDTDFGVIAEAALIDAVKAAQAKGEKVVMTNGCFDILHAGHVSYLNNAAKLGDRLIVAVNTDESVKRLKGPG
RPVNPTDRRMAVLAGLGAVDWVVPFSEDTPQRLISEVLPDLLVKGGDYKPEDIAGGKEVIAAGGEVKVLNFEDGCSTTEI
IDAIKGGRG

Sequences:

>Translated_489_residues
MLHSAQQKNWRPRMKPILPDYNNAGVLIIGDVMLDRYWYGPTSRISPEAPVPVVKVENNEERPGGAANVAMNIASLGGHA
RIVGLTGMDEPAKVLTETLNSLKVKCDFVALPEYPTITKLRVMSRGQQLIRLDFEDKFEGTNPELVLTRMERALPHVQAV
ILSDYAKGALEHVEALIAKARAANVPVFIDPKGTNFEPYRGATLLTPNMSEFEAVVGKVTSDDDLVEKALGLIEKFELGA
LLVTRSEHGMTLVRPDQKPFHLPTQAKEVYDVTGAGDTVISVLAASVAAGKPLDEACALANAAAGVVVGKLGTSTLSTIE
LAEAIHGSRDTDFGVIAEAALIDAVKAAQAKGEKVVMTNGCFDILHAGHVSYLNNAAKLGDRLIVAVNTDESVKRLKGPG
RPVNPTDRRMAVLAGLGAVDWVVPFSEDTPQRLISEVLPDLLVKGGDYKPEDIAGGKEVIAAGGEVKVLNFEDGCSTTEI
IDAIKGGRG
>Mature_489_residues
MLHSAQQKNWRPRMKPILPDYNNAGVLIIGDVMLDRYWYGPTSRISPEAPVPVVKVENNEERPGGAANVAMNIASLGGHA
RIVGLTGMDEPAKVLTETLNSLKVKCDFVALPEYPTITKLRVMSRGQQLIRLDFEDKFEGTNPELVLTRMERALPHVQAV
ILSDYAKGALEHVEALIAKARAANVPVFIDPKGTNFEPYRGATLLTPNMSEFEAVVGKVTSDDDLVEKALGLIEKFELGA
LLVTRSEHGMTLVRPDQKPFHLPTQAKEVYDVTGAGDTVISVLAASVAAGKPLDEACALANAAAGVVVGKLGTSTLSTIE
LAEAIHGSRDTDFGVIAEAALIDAVKAAQAKGEKVVMTNGCFDILHAGHVSYLNNAAKLGDRLIVAVNTDESVKRLKGPG
RPVNPTDRRMAVLAGLGAVDWVVPFSEDTPQRLISEVLPDLLVKGGDYKPEDIAGGKEVIAAGGEVKVLNFEDGCSTTEI
IDAIKGGRG

Specific function: Catalyzes the ADP transfer to D-glycero-D-manno-heptose 1-phosphate, yielding ADP-D,D-heptose [H]

COG id: COG2870

COG function: function code M; ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: In the C-terminal section; belongs to the cytidylyltransferase family [H]

Homologues:

Organism=Escherichia coli, GI1789432, Length=472, Percent_Identity=69.2796610169492, Blast_Score=667, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023030
- InterPro:   IPR011611
- InterPro:   IPR002173
- InterPro:   IPR004821
- InterPro:   IPR004820
- InterPro:   IPR011913
- InterPro:   IPR011914
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01467 CTP_transf_2; PF00294 PfkB [H]

EC number: 2.7.-.-

Molecular weight: Translated: 52203; Mature: 52203

Theoretical pI: Translated: 5.26; Mature: 5.26

Prosite motif: PS00583 PFKB_KINASES_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLHSAQQKNWRPRMKPILPDYNNAGVLIIGDVMLDRYWYGPTSRISPEAPVPVVKVENNE
CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHEECCCCCCCCCCCCCCEEEECCCC
ERPGGAANVAMNIASLGGHARIVGLTGMDEPAKVLTETLNSLKVKCDFVALPEYPTITKL
CCCCCHHHHEEEHHHCCCCEEEEEECCCCCHHHHHHHHHHHHEEEEEEEECCCCCCHHHH
RVMSRGQQLIRLDFEDKFEGTNPELVLTRMERALPHVQAVILSDYAKGALEHVEALIAKA
HHHHCCCEEEEECCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RAANVPVFIDPKGTNFEPYRGATLLTPNMSEFEAVVGKVTSDDDLVEKALGLIEKFELGA
HHCCCCEEECCCCCCCCCCCCCEEECCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCE
LLVTRSEHGMTLVRPDQKPFHLPTQAKEVYDVTGAGDTVISVLAASVAAGKPLDEACALA
EEEEECCCCEEEECCCCCCCCCCCCHHHHEEECCCCHHHHHHHHHHHHCCCCHHHHHHHH
NAAAGVVVGKLGTSTLSTIELAEAIHGSRDTDFGVIAEAALIDAVKAAQAKGEKVVMTNG
HHHCCEEEECCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECC
CFDILHAGHVSYLNNAAKLGDRLIVAVNTDESVKRLKGPGRPVNPTDRRMAVLAGLGAVD
HHHHHHCCHHHHHHHHHHCCCEEEEEECCCHHHHHHCCCCCCCCCCHHHHHHHHCCCHHH
WVVPFSEDTPQRLISEVLPDLLVKGGDYKPEDIAGGKEVIAAGGEVKVLNFEDGCSTTEI
EEEECCCCCHHHHHHHHHHHHHHCCCCCCCHHHCCCHHEEECCCEEEEEEECCCCCHHHH
IDAIKGGRG
HHHHCCCCC
>Mature Secondary Structure
MLHSAQQKNWRPRMKPILPDYNNAGVLIIGDVMLDRYWYGPTSRISPEAPVPVVKVENNE
CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHEECCCCCCCCCCCCCCEEEECCCC
ERPGGAANVAMNIASLGGHARIVGLTGMDEPAKVLTETLNSLKVKCDFVALPEYPTITKL
CCCCCHHHHEEEHHHCCCCEEEEEECCCCCHHHHHHHHHHHHEEEEEEEECCCCCCHHHH
RVMSRGQQLIRLDFEDKFEGTNPELVLTRMERALPHVQAVILSDYAKGALEHVEALIAKA
HHHHCCCEEEEECCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RAANVPVFIDPKGTNFEPYRGATLLTPNMSEFEAVVGKVTSDDDLVEKALGLIEKFELGA
HHCCCCEEECCCCCCCCCCCCCEEECCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCE
LLVTRSEHGMTLVRPDQKPFHLPTQAKEVYDVTGAGDTVISVLAASVAAGKPLDEACALA
EEEEECCCCEEEECCCCCCCCCCCCHHHHEEECCCCHHHHHHHHHHHHCCCCHHHHHHHH
NAAAGVVVGKLGTSTLSTIELAEAIHGSRDTDFGVIAEAALIDAVKAAQAKGEKVVMTNG
HHHCCEEEECCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECC
CFDILHAGHVSYLNNAAKLGDRLIVAVNTDESVKRLKGPGRPVNPTDRRMAVLAGLGAVD
HHHHHHCCHHHHHHHHHHCCCEEEEEECCCHHHHHHCCCCCCCCCCHHHHHHHHCCCHHH
WVVPFSEDTPQRLISEVLPDLLVKGGDYKPEDIAGGKEVIAAGGEVKVLNFEDGCSTTEI
EEEECCCCCHHHHHHHHHHHHHHCCCCCCCHHHCCCHHEEECCCEEEEEEECCCCCHHHH
IDAIKGGRG
HHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA