| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is 37678728
Identifier: 37678728
GI number: 37678728
Start: 531291
End: 532778
Strand: Direct
Name: 37678728
Synonym: VV0544
Alternate gene names: NA
Gene position: 531291-532778 (Clockwise)
Preceding gene: 37678727
Following gene: 37678731
Centisome position: 15.84
GC content: 42.81
Gene sequence:
>1488_bases ATGACAAAATTTATTCAAGCATCAGAGCGCCCATATATCCCATGTGAGCATCCTGATTTAAACCAGTATTTGCAGCTTTT CAAACAGAACCTTATTCGTTGCAAGCTCAAGCGTCGGGGTTTTGTTGATTTGGATGAGCAGATTATTGCTGTTTTTAAAC AAAACACAGAGCTAAAAGTACAATGTGAAGCTCTGGTTGATTATGTCGCCGAAGCTTTTGAACATTATGCGGTGTGGGAT TACAGTCATGCCTATTATCCTGGGGTATCAAGTCAGCAAACGGCTCGATTAGACGCTATGGAGGGCAGCAGTCGTGTGCT CCCAACGCTTGCTGCGTGGTTGCATGCCAATCCCAATACTGCTTTGAAAAGTTCGACACTAAGTGAAGCACAATTCAATT TGGTTGATTGGATTAAGTGCGCATTTCTTGCGGGCACCAACCCCCATCATTCTGGCTATTGGGGAAATATCGAAGACTAT GATCAAAGGATCTGTGAAAGTGCTGACTTGGCATTAGCATTATGGCTAAGTAAAGAGCAAGTATGGCAAACATTGGCTTC GGATGAGCAACAACAGATCGTTACTTGGTTTACTCAGGTCAATCATGTTGAAACCGTGGACAATAATTGGCACCTTTTTC CACTAACGGTTCAATTGGTAATGAAAGATTTGACCGGTGAAGATCATGTTGAGCATCATCGTTACGCACGCGTGAAAGAG TTTTTTGTTGGTGATGGTTGGTTTCGCGATGGGGCAAAAGGCAATTATGATTATTACAATGCTTGGGGTTTTCACTATTC ACTTTATTGGTTAGCGCAAATTGATCCTGAGTTTGACCCACATTTTATTCGCCATAGCTTAAGAACGTTTAGCGACAAAT ATCGCTACTTTTTTACACCGCAAGGCTTCCCTTTATTTGGGCGCAGTGCGTGTTATCGTTTATCTGCTACCGCCCCTTTA ATTGCCACTCTTGATGTGTGTGGAGCCAATTTACCCAACGAATATCTCGGGCAGTTTAAACGCGCATTCAAAACCAACCT CTGCTACTTTATCTCCAATGGGGCACTACAAAAAGGACGTCCGACGCAAGGCTTGTTTGCCGATGATATTCGTCTTACAG ACAACTATAGTGGTCCGGCAAGCAGCTTTTGGTCTTTAAGAGCACTAAACATCGCCTTATTCTGTGGTGACAGAATTGGC TTATGGGAAGCGAAGGAGCAGCCGTTAGAAATCGAAAAAGAGAGTTTTATGTTCTCTTTAAATGGTCCCAATATGTTGGT GGTTGGGATTCAAGAAACGCAAGAAGTGAATGTGATCTTTAAGAATGATTACATTAAGGAGCAAACGCCGCAATCGAGAA AACTTGCGTCACAATCGATACTTAAAAAGTGGCAGGAGAGGTTGGTTGGTCGTGCAGAGCGACCGAAAAACAATCTATTA CGCAAAGGTGTCACAAGCTATAGTTCGAAGCTATTTCACTTCTTCTAG
Upstream 100 bases:
>100_bases CTAATCAGCGTCAGTACTTTAAAAGACAAGACCAATTAATTTGATTGGTCTTTGTGTTTCTATACGGTGTGCTTTTTTAG GCGCGCTATCCGGAGGCGAA
Downstream 100 bases:
>100_bases CTATTGATTAGATGCTCGGTTGTTTTGCAACTAGATACTCTATTTTGGCTTCTATGCGGTAATGGAGATCTAGTTGCTGG CTTTCTTGCCGTGATACAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 495; Mature: 494
Protein sequence:
>495_residues MTKFIQASERPYIPCEHPDLNQYLQLFKQNLIRCKLKRRGFVDLDEQIIAVFKQNTELKVQCEALVDYVAEAFEHYAVWD YSHAYYPGVSSQQTARLDAMEGSSRVLPTLAAWLHANPNTALKSSTLSEAQFNLVDWIKCAFLAGTNPHHSGYWGNIEDY DQRICESADLALALWLSKEQVWQTLASDEQQQIVTWFTQVNHVETVDNNWHLFPLTVQLVMKDLTGEDHVEHHRYARVKE FFVGDGWFRDGAKGNYDYYNAWGFHYSLYWLAQIDPEFDPHFIRHSLRTFSDKYRYFFTPQGFPLFGRSACYRLSATAPL IATLDVCGANLPNEYLGQFKRAFKTNLCYFISNGALQKGRPTQGLFADDIRLTDNYSGPASSFWSLRALNIALFCGDRIG LWEAKEQPLEIEKESFMFSLNGPNMLVVGIQETQEVNVIFKNDYIKEQTPQSRKLASQSILKKWQERLVGRAERPKNNLL RKGVTSYSSKLFHFF
Sequences:
>Translated_495_residues MTKFIQASERPYIPCEHPDLNQYLQLFKQNLIRCKLKRRGFVDLDEQIIAVFKQNTELKVQCEALVDYVAEAFEHYAVWD YSHAYYPGVSSQQTARLDAMEGSSRVLPTLAAWLHANPNTALKSSTLSEAQFNLVDWIKCAFLAGTNPHHSGYWGNIEDY DQRICESADLALALWLSKEQVWQTLASDEQQQIVTWFTQVNHVETVDNNWHLFPLTVQLVMKDLTGEDHVEHHRYARVKE FFVGDGWFRDGAKGNYDYYNAWGFHYSLYWLAQIDPEFDPHFIRHSLRTFSDKYRYFFTPQGFPLFGRSACYRLSATAPL IATLDVCGANLPNEYLGQFKRAFKTNLCYFISNGALQKGRPTQGLFADDIRLTDNYSGPASSFWSLRALNIALFCGDRIG LWEAKEQPLEIEKESFMFSLNGPNMLVVGIQETQEVNVIFKNDYIKEQTPQSRKLASQSILKKWQERLVGRAERPKNNLL RKGVTSYSSKLFHFF >Mature_494_residues TKFIQASERPYIPCEHPDLNQYLQLFKQNLIRCKLKRRGFVDLDEQIIAVFKQNTELKVQCEALVDYVAEAFEHYAVWDY SHAYYPGVSSQQTARLDAMEGSSRVLPTLAAWLHANPNTALKSSTLSEAQFNLVDWIKCAFLAGTNPHHSGYWGNIEDYD QRICESADLALALWLSKEQVWQTLASDEQQQIVTWFTQVNHVETVDNNWHLFPLTVQLVMKDLTGEDHVEHHRYARVKEF FVGDGWFRDGAKGNYDYYNAWGFHYSLYWLAQIDPEFDPHFIRHSLRTFSDKYRYFFTPQGFPLFGRSACYRLSATAPLI ATLDVCGANLPNEYLGQFKRAFKTNLCYFISNGALQKGRPTQGLFADDIRLTDNYSGPASSFWSLRALNIALFCGDRIGL WEAKEQPLEIEKESFMFSLNGPNMLVVGIQETQEVNVIFKNDYIKEQTPQSRKLASQSILKKWQERLVGRAERPKNNLLR KGVTSYSSKLFHFF
Specific function: Unknown
COG id: COG4289
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57276; Mature: 57145
Theoretical pI: Translated: 6.91; Mature: 6.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKFIQASERPYIPCEHPDLNQYLQLFKQNLIRCKLKRRGFVDLDEQIIAVFKQNTELKV CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEE QCEALVDYVAEAFEHYAVWDYSHAYYPGVSSQQTARLDAMEGSSRVLPTLAAWLHANPNT EHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHCCCCCC ALKSSTLSEAQFNLVDWIKCAFLAGTNPHHSGYWGNIEDYDQRICESADLALALWLSKEQ HHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEECHHH VWQTLASDEQQQIVTWFTQVNHVETVDNNWHLFPLTVQLVMKDLTGEDHVEHHRYARVKE HHHHHHCCHHHHHHHHHHHHCCEEEECCCEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHH FFVGDGWFRDGAKGNYDYYNAWGFHYSLYWLAQIDPEFDPHFIRHSLRTFSDKYRYFFTP HHCCCCEECCCCCCCCCCEEECEEEEEEEEEEECCCCCCHHHHHHHHHHHCCCCEEEECC QGFPLFGRSACYRLSATAPLIATLDVCGANLPNEYLGQFKRAFKTNLCYFISNGALQKGR CCCCCCCCCHHEEECCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCEEEEEECCCCCCCC PTQGLFADDIRLTDNYSGPASSFWSLRALNIALFCGDRIGLWEAKEQPLEIEKESFMFSL CCCCCEECCEEEECCCCCCCHHHHHHEEEEEEEEECCCCCCCCCCCCCCEEECCCEEEEE NGPNMLVVGIQETQEVNVIFKNDYIKEQTPQSRKLASQSILKKWQERLVGRAERPKNNLL CCCCEEEEEECCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH RKGVTSYSSKLFHFF HHHHHHHHHHHHHCC >Mature Secondary Structure TKFIQASERPYIPCEHPDLNQYLQLFKQNLIRCKLKRRGFVDLDEQIIAVFKQNTELKV CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEE QCEALVDYVAEAFEHYAVWDYSHAYYPGVSSQQTARLDAMEGSSRVLPTLAAWLHANPNT EHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHCCCCCC ALKSSTLSEAQFNLVDWIKCAFLAGTNPHHSGYWGNIEDYDQRICESADLALALWLSKEQ HHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEECHHH VWQTLASDEQQQIVTWFTQVNHVETVDNNWHLFPLTVQLVMKDLTGEDHVEHHRYARVKE HHHHHHCCHHHHHHHHHHHHCCEEEECCCEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHH FFVGDGWFRDGAKGNYDYYNAWGFHYSLYWLAQIDPEFDPHFIRHSLRTFSDKYRYFFTP HHCCCCEECCCCCCCCCCEEECEEEEEEEEEEECCCCCCHHHHHHHHHHHCCCCEEEECC QGFPLFGRSACYRLSATAPLIATLDVCGANLPNEYLGQFKRAFKTNLCYFISNGALQKGR CCCCCCCCCHHEEECCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCEEEEEECCCCCCCC PTQGLFADDIRLTDNYSGPASSFWSLRALNIALFCGDRIGLWEAKEQPLEIEKESFMFSL CCCCCEECCEEEECCCCCCCHHHHHHEEEEEEEEECCCCCCCCCCCCCCEEECCCEEEEE NGPNMLVVGIQETQEVNVIFKNDYIKEQTPQSRKLASQSILKKWQERLVGRAERPKNNLL CCCCEEEEEECCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH RKGVTSYSSKLFHFF HHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA