| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is mlaE [H]
Identifier: 37678640
GI number: 37678640
Start: 443941
End: 444729
Strand: Direct
Name: mlaE [H]
Synonym: VV0456
Alternate gene names: 37678640
Gene position: 443941-444729 (Clockwise)
Preceding gene: 37678639
Following gene: 37678641
Centisome position: 13.23
GC content: 50.82
Gene sequence:
>789_bases ATGCCTAACTTAGTCGACATGATTTCAGTGCTCGGGCGTCGCTTCCTTAGCTTATGTCAATCATTTGGTAAGGCGAGCTT AATGCTTGCCGGTGCACTTGCGGGGAGACCACAACCGCGAAAAACGCTGCCACTATTGGTAAAGCAAATCTATAACGTGG GGGTGCAGTCTTTAGCCATCATCGTGGTCTCTGGACTCTTCATTGGTATGGTGTTGAGTCTACAAGGCTACGTGATTTTG GTGGATTACGGCGCAGAAGGCAGCCTAGGGCAAATGGTCGCGCTGTCGTTATTGCGTGAGCTAGGGCCAGTTGTGACGGC TTTGTTGTTTGCTGGGCGAGCGGGCTCTGCGCTCACGGCTGAAATTGGCCTGATGAAAGCGACAGAGCAACTTTCTAGTA TGGAAATGATGGCGGTTGACCCACTTAAAAGAATCATAGCGCCAAGATTGTGGGCAGGCATTATCTCAATGCCGCTGTTG GCGATGATCTTCATGGCCGTGGGTATTTGGGGCGGCCAATTGGTGGGTGTTGACTGGAAAGGCATCGACCACGGCAGTTT TTGGTCAGCCATGCAAGCTTCGGTGGAGTTAGGGCAAGATATTGGTAACAGCATGATCAAATGCGTGGTCTTTGCCATTA CCGTGACTTGGATTGCGCTCTTTAATGGTTACGATGCTATTCCAACTTCGGAAGGCATCAGCCGTGCGACGACTCGCACG GTGGTTCACTCTTCTTTAGCGGTGTTGGGGCTGGATTTTGTCCTCACTGCGTTGATGTTTGGGAATTAA
Upstream 100 bases:
>100_bases AACAGCGATCCTCGTGTTCAACAATTTTTATTGGGTGAAGCGGATGGTCCTGTGCCGTTTCGTTTTCCCGCGCAACCCAT AGAAAAGGATTTATTTCACG
Downstream 100 bases:
>100_bases ACATGCAACAAACACGTAAAACAGAATTATGGGTTGGCAGCTTTGTCTTGGCGGGAATTTGCGCAATTCTGGTCATGATT TTTCAAGTCGCTGACGTAAA
Product: ABC-type transport system, permease component
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 262; Mature: 261
Protein sequence:
>262_residues MPNLVDMISVLGRRFLSLCQSFGKASLMLAGALAGRPQPRKTLPLLVKQIYNVGVQSLAIIVVSGLFIGMVLSLQGYVIL VDYGAEGSLGQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKATEQLSSMEMMAVDPLKRIIAPRLWAGIISMPLL AMIFMAVGIWGGQLVGVDWKGIDHGSFWSAMQASVELGQDIGNSMIKCVVFAITVTWIALFNGYDAIPTSEGISRATTRT VVHSSLAVLGLDFVLTALMFGN
Sequences:
>Translated_262_residues MPNLVDMISVLGRRFLSLCQSFGKASLMLAGALAGRPQPRKTLPLLVKQIYNVGVQSLAIIVVSGLFIGMVLSLQGYVIL VDYGAEGSLGQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKATEQLSSMEMMAVDPLKRIIAPRLWAGIISMPLL AMIFMAVGIWGGQLVGVDWKGIDHGSFWSAMQASVELGQDIGNSMIKCVVFAITVTWIALFNGYDAIPTSEGISRATTRT VVHSSLAVLGLDFVLTALMFGN >Mature_261_residues PNLVDMISVLGRRFLSLCQSFGKASLMLAGALAGRPQPRKTLPLLVKQIYNVGVQSLAIIVVSGLFIGMVLSLQGYVILV DYGAEGSLGQMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKATEQLSSMEMMAVDPLKRIIAPRLWAGIISMPLLA MIFMAVGIWGGQLVGVDWKGIDHGSFWSAMQASVELGQDIGNSMIKCVVFAITVTWIALFNGYDAIPTSEGISRATTRTV VHSSLAVLGLDFVLTALMFGN
Specific function: Part of the ABC transporter complex mlaFEDB that actively prevents phospholipid accumulation at the cell surface. Probably maintains lipid asymmetry in the outer membrane by retrograde trafficking of phospholipids from the outer membrane to the inner memb
COG id: COG0767
COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mlaE permease family [H]
Homologues:
Organism=Escherichia coli, GI1789585, Length=259, Percent_Identity=73.7451737451737, Blast_Score=382, Evalue=1e-108,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003453 [H]
Pfam domain/function: PF02405 DUF140 [H]
EC number: NA
Molecular weight: Translated: 27847; Mature: 27715
Theoretical pI: Translated: 8.71; Mature: 8.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 5.7 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 5.4 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNLVDMISVLGRRFLSLCQSFGKASLMLAGALAGRPQPRKTLPLLVKQIYNVGVQSLAI CCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH IVVSGLFIGMVLSLQGYVILVDYGAEGSLGQMVALSLLRELGPVVTALLFAGRAGSALTA HHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH EIGLMKATEQLSSMEMMAVDPLKRIIAPRLWAGIISMPLLAMIFMAVGIWGGQLVGVDWK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCC GIDHGSFWSAMQASVELGQDIGNSMIKCVVFAITVTWIALFNGYDAIPTSEGISRATTRT CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH VVHSSLAVLGLDFVLTALMFGN HHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PNLVDMISVLGRRFLSLCQSFGKASLMLAGALAGRPQPRKTLPLLVKQIYNVGVQSLAI CHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH IVVSGLFIGMVLSLQGYVILVDYGAEGSLGQMVALSLLRELGPVVTALLFAGRAGSALTA HHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH EIGLMKATEQLSSMEMMAVDPLKRIIAPRLWAGIISMPLLAMIFMAVGIWGGQLVGVDWK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCC GIDHGSFWSAMQASVELGQDIGNSMIKCVVFAITVTWIALFNGYDAIPTSEGISRATTRT CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH VVHSSLAVLGLDFVLTALMFGN HHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]