| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is cysD [H]
Identifier: 37678595
GI number: 37678595
Start: 405393
End: 406301
Strand: Direct
Name: cysD [H]
Synonym: VV0411
Alternate gene names: 37678595
Gene position: 405393-406301 (Clockwise)
Preceding gene: 37678594
Following gene: 37678596
Centisome position: 12.09
GC content: 47.3
Gene sequence:
>909_bases ATGGATCAACAACGCCTGACTCACTTGAAGCAGCTGGAAGCAGAAAGCATTCACATTATTCGTGAAGTGGCTGCTGAGTT CGACAATCCAGTAATGATGTACTCAATCGGCAAAGACTCTTCGGTCATGCTGCATTTAGCACGCAAAGCCTTCTATCCAG GGAAGATTCCTTTCCCACTACTGCATGTAGATACGGATTGGAAATTCCGCGAAATGATCGAATTTCGTGATCGTACGGCA GAGAAGTACGGCTTTGAATTGTTGGTACATAAGAACCCAGAAGGCCTCGCTATGGGATGTAGCCCATTTACCCACGGCTC ATCGAAACATACTGACATCATGAAAACGCAAGGTCTTAAGCAAGCATTAAATAAGTATGGTTTTGATGCTGCCTTTGGTG GTGCGCGTCGTGATGAAGAAAAATCGCGAGCGAAAGAGCGTGTTTACTCATTCCGCGACAAAAACCACACTTGGGATCCA AAAAACCAGCGCCCAGAGCTGTGGAAAACCTATAACGGCCAAGTAAACAAAGGCGAAAGCATTCGCGTGTTCCCTTTGTC GAATTGGACAGAATTGGATATTTGGCAATACATCTACCTAGAGAACATCGAGATTGTTCCGCTGTATCTGGCTGCTAAAC GCCCGGTGGTAGAGCGTGATGGCATGCTGATCATGGTGGACGATGATCGTATGAAGCTGAAAGAAGGTGAAGTGATTGAA GAGAAAAGCGTGCGCTTCCGTACCCTTGGTTGTTACCCACTGACGGGCGCGATCGAATCAGAGGCGAATACGTTGACAGG CATTATTGAAGAGATGCTGGTGGCGACTTCCAGTGAGCGTCAAGGACGAGCCATCGACCACGATCAATCGGGTTCGATGG AACTGAAAAAACGTCAGGGTTACTTCTAA
Upstream 100 bases:
>100_bases TGGTACTCGAATCAACAATAGTGCTATTGCCAACTCAATATAATCGTTACCAAAGATTTAGGGATACGTATAAGCCAAAA GGTTTAAAAAGGAAATAACT
Downstream 100 bases:
>100_bases GGATCTAAGGAAAGAAAATGAATAGTGCAGTTCAAGCTCAGCTCGCTGAGTTAGGTATTGAAGGTTACCTAAATCAACAC CAACACAAATCGCTACTTAG
Product: sulfate adenylyltransferase subunit 2
Products: NA
Alternate protein names: ATP-sulfurylase small subunit; Sulfate adenylate transferase; SAT [H]
Number of amino acids: Translated: 302; Mature: 302
Protein sequence:
>302_residues MDQQRLTHLKQLEAESIHIIREVAAEFDNPVMMYSIGKDSSVMLHLARKAFYPGKIPFPLLHVDTDWKFREMIEFRDRTA EKYGFELLVHKNPEGLAMGCSPFTHGSSKHTDIMKTQGLKQALNKYGFDAAFGGARRDEEKSRAKERVYSFRDKNHTWDP KNQRPELWKTYNGQVNKGESIRVFPLSNWTELDIWQYIYLENIEIVPLYLAAKRPVVERDGMLIMVDDDRMKLKEGEVIE EKSVRFRTLGCYPLTGAIESEANTLTGIIEEMLVATSSERQGRAIDHDQSGSMELKKRQGYF
Sequences:
>Translated_302_residues MDQQRLTHLKQLEAESIHIIREVAAEFDNPVMMYSIGKDSSVMLHLARKAFYPGKIPFPLLHVDTDWKFREMIEFRDRTA EKYGFELLVHKNPEGLAMGCSPFTHGSSKHTDIMKTQGLKQALNKYGFDAAFGGARRDEEKSRAKERVYSFRDKNHTWDP KNQRPELWKTYNGQVNKGESIRVFPLSNWTELDIWQYIYLENIEIVPLYLAAKRPVVERDGMLIMVDDDRMKLKEGEVIE EKSVRFRTLGCYPLTGAIESEANTLTGIIEEMLVATSSERQGRAIDHDQSGSMELKKRQGYF >Mature_302_residues MDQQRLTHLKQLEAESIHIIREVAAEFDNPVMMYSIGKDSSVMLHLARKAFYPGKIPFPLLHVDTDWKFREMIEFRDRTA EKYGFELLVHKNPEGLAMGCSPFTHGSSKHTDIMKTQGLKQALNKYGFDAAFGGARRDEEKSRAKERVYSFRDKNHTWDP KNQRPELWKTYNGQVNKGESIRVFPLSNWTELDIWQYIYLENIEIVPLYLAAKRPVVERDGMLIMVDDDRMKLKEGEVIE EKSVRFRTLGCYPLTGAIESEANTLTGIIEEMLVATSSERQGRAIDHDQSGSMELKKRQGYF
Specific function: First step in the sulfate activation pathway. This reaction occurs early in the reductive branch of the cysteine biosynthetic pathway. [C]
COG id: COG0175
COG function: function code EH; 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PAPS reductase family. CysD subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789109, Length=302, Percent_Identity=83.112582781457, Blast_Score=538, Evalue=1e-154,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002500 - InterPro: IPR014729 - InterPro: IPR011784 [H]
Pfam domain/function: PF01507 PAPS_reduct [H]
EC number: =2.7.7.4 [H]
Molecular weight: Translated: 34972; Mature: 34972
Theoretical pI: Translated: 7.03; Mature: 7.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDQQRLTHLKQLEAESIHIIREVAAEFDNPVMMYSIGKDSSVMLHLARKAFYPGKIPFPL CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCEE LHVDTDWKFREMIEFRDRTAEKYGFELLVHKNPEGLAMGCSPFTHGSSKHTDIMKTQGLK EEECCCCHHHHHHHHHHHHHHHCCEEEEEEECCCCCEECCCCCCCCCCCCCHHHHHHHHH QALNKYGFDAAFGGARRDEEKSRAKERVYSFRDKNHTWDPKNQRPELWKTYNGQVNKGES HHHHHCCCCHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCCCCE IRVFPLSNWTELDIWQYIYLENIEIVPLYLAAKRPVVERDGMLIMVDDDRMKLKEGEVIE EEEEECCCCCCCHHEEEEEECCCEEEEEEEECCCCEEECCCEEEEECCCCEECCCCCEEC EKSVRFRTLGCYPLTGAIESEANTLTGIIEEMLVATSSERQGRAIDHDQSGSMELKKRQG CCCCEEEEECCEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEHHHCCC YF CC >Mature Secondary Structure MDQQRLTHLKQLEAESIHIIREVAAEFDNPVMMYSIGKDSSVMLHLARKAFYPGKIPFPL CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCEE LHVDTDWKFREMIEFRDRTAEKYGFELLVHKNPEGLAMGCSPFTHGSSKHTDIMKTQGLK EEECCCCHHHHHHHHHHHHHHHCCEEEEEEECCCCCEECCCCCCCCCCCCCHHHHHHHHH QALNKYGFDAAFGGARRDEEKSRAKERVYSFRDKNHTWDPKNQRPELWKTYNGQVNKGES HHHHHCCCCHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCCCCE IRVFPLSNWTELDIWQYIYLENIEIVPLYLAAKRPVVERDGMLIMVDDDRMKLKEGEVIE EEEEECCCCCCCHHEEEEEECCCEEEEEEEECCCCEEECCCEEEEECCCCEECCCCCEEC EKSVRFRTLGCYPLTGAIESEANTLTGIIEEMLVATSSERQGRAIDHDQSGSMELKKRQG CCCCEEEEECCEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEHHHCCC YF CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA