| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
Click here to switch to the map view.
The map label for this gene is manC [H]
Identifier: 37678536
GI number: 37678536
Start: 360085
End: 361494
Strand: Direct
Name: manC [H]
Synonym: VV0352
Alternate gene names: 37678536
Gene position: 360085-361494 (Clockwise)
Preceding gene: 37678535
Following gene: 37678537
Centisome position: 10.73
GC content: 41.49
Gene sequence:
>1410_bases ATGATATTACCAATCATTATGGCAGGCGGTTCAGGCACGCGTTTATGGCCATTGTCGCGTGATAACTACCCAAAACAATT TTTAAAATTGCATGGTGAAAATACTATGCTGCAAGAGACTATTTTAAGATTAAATGGTCTTGAGCACTCACCTGCGATGT TGATTTGTAACGAAGAACATCGTTTTATTGCAGCAGAGCAAGTTCGTCAAATTGGTGTTGCACATAGTGGCATCTTTTTA GAACCCGTGGGTCGCAATACCGCACCAGCCATTGCATTAGCAGCTTTTAAAGCAGTTGAAAACAATCAAGATGCATTGCT GCTTGTTTTGGCAGCAGACCATGTTATTGAAAATCAAGCAGCGTTCCAAGAAAGTGTTAACAACGCAAAGTTGTTGGCAG AGCAAGGTAAACTCGTGACCTTTGGTATCGTTGGTAATACGCCTGAAACGGCTTATGGCTATATTAAACGTGGAAAAGAA GTTGAACATGGCTTTGTGGTTGATAGCTTTGTAGAAAAACCAGACCTTCAAACAGCACAAGAATATATTGCCAGTGGCAA TTACTTCTGGAATAGCGGCATGTTCTTGTTCAAGGCAAGCCGTTATCTTGAAGAGCTTAAAGCATACCGCCCAGACATTT ATGAAGCGTGTGAAAAAGCTGTTCAAGTACAAAATAATGACATTGATTTTGTGCGTGTAGATAAAGACGCATTTGAAGCA TGCCCAGATGAATCCGTTGACTATGCAGTCATGGAGCATACACAGGATGCTGTTGTTGTGCCGATGAATGCAAACTGGAA TGATGTTGGCGGCTTTGCAGCATTATGGGAAGTGTCTGATCAAGATGAAAATGGCAACGCTTTTGTCGGCGACGTTAAAT CAGTTGATACAAAAAACACCCTTGTGTTTGCTAAAGACAAGTTGGTTACAACAGTTGGTGTTGAAGACTTAGTTATCGTT AATACCAAGGATGCTGTATTAGTTGCGCACAAAGACGAATCTCAAAAAGTAAAAGAAATCGTTAGCCAATTAAAAGCGGA CGAGCGTTCAGAAGTGACATTCCACCGTGAAGTATATCGCCCTTGGGGTAAATACGATTCGGTAGATAACGGAGAGCGCT TCCAAGTTAAACGTATTACGGTTAAGCCTGGCGCAAAACTATCCGTGCAAATGCATCATCACAGAGCTGAGCATTGGATT GTGGTTTCTGGTACAGCAAAAGTACAAATTGATGATACAGAGCAGTTCGTCACTGAAAATGAATCAGTATACATTCCTAT CACCGCGGTTCACGCACTAGAAAATCCAGGCAAAGTAGATTTAGAGCTTATTGAGGTTCAGTCTGGTTCGTACTTAGGCG AAGATGATATTGTGCGCTTTGAAGACCGCTATGGAAGGGTAAAAGATTAA
Upstream 100 bases:
>100_bases ATCAATGGTTTGATATAGATAGCCTATTAATAGATGAAAAAGTCCATAAGCATACAAAATGGTACTTTGAAGCATTGCAG AATACACAGGGACAATTAAT
Downstream 100 bases:
>100_bases GTTATGAATACAAAGGCAGTAATTCAAACAAGTGGCATTGCATTTGGTACCAGTGGTGCTAGAGGCCTCGTTGTCGACTT TACACCAGAAGTGTGTGCTG
Product: mannose-1-phosphate guanylyltransferase
Products: NA
Alternate protein names: GDP-mannose pyrophosphorylase; GMP; GMPP [H]
Number of amino acids: Translated: 469; Mature: 469
Protein sequence:
>469_residues MILPIIMAGGSGTRLWPLSRDNYPKQFLKLHGENTMLQETILRLNGLEHSPAMLICNEEHRFIAAEQVRQIGVAHSGIFL EPVGRNTAPAIALAAFKAVENNQDALLLVLAADHVIENQAAFQESVNNAKLLAEQGKLVTFGIVGNTPETAYGYIKRGKE VEHGFVVDSFVEKPDLQTAQEYIASGNYFWNSGMFLFKASRYLEELKAYRPDIYEACEKAVQVQNNDIDFVRVDKDAFEA CPDESVDYAVMEHTQDAVVVPMNANWNDVGGFAALWEVSDQDENGNAFVGDVKSVDTKNTLVFAKDKLVTTVGVEDLVIV NTKDAVLVAHKDESQKVKEIVSQLKADERSEVTFHREVYRPWGKYDSVDNGERFQVKRITVKPGAKLSVQMHHHRAEHWI VVSGTAKVQIDDTEQFVTENESVYIPITAVHALENPGKVDLELIEVQSGSYLGEDDIVRFEDRYGRVKD
Sequences:
>Translated_469_residues MILPIIMAGGSGTRLWPLSRDNYPKQFLKLHGENTMLQETILRLNGLEHSPAMLICNEEHRFIAAEQVRQIGVAHSGIFL EPVGRNTAPAIALAAFKAVENNQDALLLVLAADHVIENQAAFQESVNNAKLLAEQGKLVTFGIVGNTPETAYGYIKRGKE VEHGFVVDSFVEKPDLQTAQEYIASGNYFWNSGMFLFKASRYLEELKAYRPDIYEACEKAVQVQNNDIDFVRVDKDAFEA CPDESVDYAVMEHTQDAVVVPMNANWNDVGGFAALWEVSDQDENGNAFVGDVKSVDTKNTLVFAKDKLVTTVGVEDLVIV NTKDAVLVAHKDESQKVKEIVSQLKADERSEVTFHREVYRPWGKYDSVDNGERFQVKRITVKPGAKLSVQMHHHRAEHWI VVSGTAKVQIDDTEQFVTENESVYIPITAVHALENPGKVDLELIEVQSGSYLGEDDIVRFEDRYGRVKD >Mature_469_residues MILPIIMAGGSGTRLWPLSRDNYPKQFLKLHGENTMLQETILRLNGLEHSPAMLICNEEHRFIAAEQVRQIGVAHSGIFL EPVGRNTAPAIALAAFKAVENNQDALLLVLAADHVIENQAAFQESVNNAKLLAEQGKLVTFGIVGNTPETAYGYIKRGKE VEHGFVVDSFVEKPDLQTAQEYIASGNYFWNSGMFLFKASRYLEELKAYRPDIYEACEKAVQVQNNDIDFVRVDKDAFEA CPDESVDYAVMEHTQDAVVVPMNANWNDVGGFAALWEVSDQDENGNAFVGDVKSVDTKNTLVFAKDKLVTTVGVEDLVIV NTKDAVLVAHKDESQKVKEIVSQLKADERSEVTFHREVYRPWGKYDSVDNGERFQVKRITVKPGAKLSVQMHHHRAEHWI VVSGTAKVQIDDTEQFVTENESVYIPITAVHALENPGKVDLELIEVQSGSYLGEDDIVRFEDRYGRVKD
Specific function: Involved in GDP-mannose biosynthesis which serves as the activated sugar nucleotide precursor for mannose residues in cell surface polysaccharides. This enzyme participates in synthesis of the LPS O antigen [H]
COG id: COG0836
COG function: function code M; Mannose-1-phosphate guanylyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mannose-6-phosphate isomerase type 2 family [H]
Homologues:
Organism=Escherichia coli, GI1788362, Length=474, Percent_Identity=63.7130801687764, Blast_Score=601, Evalue=1e-173,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011051 - InterPro: IPR018247 - InterPro: IPR006375 - InterPro: IPR001538 - InterPro: IPR005835 - InterPro: IPR014710 [H]
Pfam domain/function: PF01050 MannoseP_isomer; PF00483 NTP_transferase [H]
EC number: =2.7.7.13 [H]
Molecular weight: Translated: 52484; Mature: 52484
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILPIIMAGGSGTRLWPLSRDNYPKQFLKLHGENTMLQETILRLNGLEHSPAMLICNEEH CEEEEEEECCCCCEEEECCCCCCCHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEECCCC RFIAAEQVRQIGVAHSGIFLEPVGRNTAPAIALAAFKAVENNQDALLLVLAADHVIENQA CEEHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEEEECCHHHHHHH AFQESVNNAKLLAEQGKLVTFGIVGNTPETAYGYIKRGKEVEHGFVVDSFVEKPDLQTAQ HHHHCCCCCEEEECCCCEEEEEEECCCCCHHHHHHHCCCCCCCCEEEHHHHCCCCHHHHH EYIASGNYFWNSGMFLFKASRYLEELKAYRPDIYEACEKAVQVQNNDIDFVRVDKDAFEA HHHHCCCEEECCCEEEEHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCEEEECHHHHHC CPDESVDYAVMEHTQDAVVVPMNANWNDVGGFAALWEVSDQDENGNAFVGDVKSVDTKNT CCCCCCCCCEEECCCCEEEEEECCCCCCCCCEEEEEEECCCCCCCCEEEECCCCCCCCCE LVFAKDKLVTTVGVEDLVIVNTKDAVLVAHKDESQKVKEIVSQLKADERSEVTFHREVYR EEEEECCEEEEECCCEEEEEECCCEEEEEECCCHHHHHHHHHHHCCCCCCCEEEEHHHHC PWGKYDSVDNGERFQVKRITVKPGAKLSVQMHHHRAEHWIVVSGTAKVQIDDTEQFVTEN CCCCCCCCCCCCEEEEEEEEECCCCEEEEEEECCCCCEEEEEECEEEEEECCCHHHHCCC ESVYIPITAVHALENPGKVDLELIEVQSGSYLGEDDIVRFEDRYGRVKD CCEEEEEEEEEECCCCCCCEEEEEEEECCCCCCCCCEEEEHHCCCCCCC >Mature Secondary Structure MILPIIMAGGSGTRLWPLSRDNYPKQFLKLHGENTMLQETILRLNGLEHSPAMLICNEEH CEEEEEEECCCCCEEEECCCCCCCHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEECCCC RFIAAEQVRQIGVAHSGIFLEPVGRNTAPAIALAAFKAVENNQDALLLVLAADHVIENQA CEEHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEEEECCHHHHHHH AFQESVNNAKLLAEQGKLVTFGIVGNTPETAYGYIKRGKEVEHGFVVDSFVEKPDLQTAQ HHHHCCCCCEEEECCCCEEEEEEECCCCCHHHHHHHCCCCCCCCEEEHHHHCCCCHHHHH EYIASGNYFWNSGMFLFKASRYLEELKAYRPDIYEACEKAVQVQNNDIDFVRVDKDAFEA HHHHCCCEEECCCEEEEHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCEEEECHHHHHC CPDESVDYAVMEHTQDAVVVPMNANWNDVGGFAALWEVSDQDENGNAFVGDVKSVDTKNT CCCCCCCCCEEECCCCEEEEEECCCCCCCCCEEEEEEECCCCCCCCEEEECCCCCCCCCE LVFAKDKLVTTVGVEDLVIVNTKDAVLVAHKDESQKVKEIVSQLKADERSEVTFHREVYR EEEEECCEEEEECCCEEEEEECCCEEEEEECCCHHHHHHHHHHHCCCCCCCEEEEHHHHC PWGKYDSVDNGERFQVKRITVKPGAKLSVQMHHHRAEHWIVVSGTAKVQIDDTEQFVTEN CCCCCCCCCCCCEEEEEEEEECCCCEEEEEEECCCCCEEEEEECEEEEEECCCHHHHCCC ESVYIPITAVHALENPGKVDLELIEVQSGSYLGEDDIVRFEDRYGRVKD CCEEEEEEEEEECCCCCCCEEEEEEEECCCCCCCCCEEEEHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1383393 [H]