The gene/protein map for NC_005139 is currently unavailable.
Definition Vibrio vulnificus YJ016 chromosome I, complete sequence.
Accession NC_005139
Length 3,354,505

Click here to switch to the map view.

The map label for this gene is 37678505

Identifier: 37678505

GI number: 37678505

Start: 329524

End: 330660

Strand: Direct

Name: 37678505

Synonym: VV0321

Alternate gene names: NA

Gene position: 329524-330660 (Clockwise)

Preceding gene: 37678504

Following gene: 37678506

Centisome position: 9.82

GC content: 36.24

Gene sequence:

>1137_bases
ATGAAATTTTGTTCAAATTGTGTAATGCCTGATACAAAACCAGGTATTGTTCTTGATGAACGAGGGTTTTGTAATGCTTG
TCGTACAAAAGAAGTAAAAGAAAAAATTGATTGGACTGCTCGTTATAATGACCTAAGTTTGATTGTTGAGGACATCAAAG
CTCAGAATAACCCTTTTTATGACTGTATTGTTGCGGTTAGTGGTGGTAAGGATAGCTGGTATCAAGCTGCCGTTTTAGCT
GAAGAGTTTGGTTTAAAAGTATTATGCGTAACTCTTGCTGCACATCTACCTACGACAGAGGGAATAGATAATCTCAATGA
AATGATCAAAGATCTGAACGTTGATCACATGAAAATCACTATTAAGCCAAGTGTGTTCAGGAAAATTAGAAGAAAGTGTT
TTCTTCGTCAAGGTGAACCAAACTGGGCTGAGCATTGTGCAATGTTTTCAAGCGTAGTGAATACGGCATTGATATATGAT
GTACCATTAGTCGTTTGGGGGGAAGATATTGCTTTTGAATTTGGAGGTTTACAGCGTTCAGAAAGCAAGCCATCAGCAAT
AGCGATAAATAAGAGTGATCTAATCAAAGAGAAAACAATTCATGACTGGTTAGATAACGATATATCAGAGCGAGATATAT
TCTTTTATAAATATCCTGATTATCAAAAATTGCAAGATGCAGGTGTTAAAAGCATATATTTAGGACATTTTGTACGTTGG
TATGGACGACAAAATTATGAATTTGTTAAAAAACGAGGATTTACTGGGCGTCGTGAAGGCCCTTTGCCTGGGAATTTCCT
CGATTACGACAATATTGATGAAAAGTTATGTGAAATTAATATTTGGTTCAAATACCTAAAATTTGGTTTTTGGCGTGCGA
CAGATCAAACTTGCTATGATATTTGGAATGATCGTATGACACGTGATGAGGCTGTTGATATTGTTAATCGTTTGCAAGCT
GAATTTCCATCGAATGACTTTGAGCATTTTTTGCGTTTTCATGATATTACGGAAGAGCAATTTTGGGAAACCGTTGAAAA
GTTTAGAAACCATGATATTTGGGAACAGGTGGATGGTGAATGGAAACTAAAGTATACACTTGAGAAGTCTCAGTCTGATG
AGGCGAGTAATGCTTAG

Upstream 100 bases:

>100_bases
AACCAAATTACTAGAAGAACAATCATTTGAAGATGAGTATATATTATTGGGTCGTACTTATATCGACGAAGCAAACTATA
AAGCAAAAGAAGGATAAGTT

Downstream 100 bases:

>100_bases
TGTATATAGAAAGATAAGATTTTGGTTGACGGCTCAACGTGTTGGACCTGACATGCCAATGACGCATTGGATGCTTTTTT
CTCAAAGGTTGGGTTATTTT

Product: putitive LPS biosynthesis protein

Products: NA

Alternate protein names: LPS Biosynthesis Protein; N-Acetyl Sugar Amidotransferase; Putitive LPS Biosynthesis Protein; Flagellin Protein PseA; N-Acetyl Sugar Amidotransferase Subfamily; PP-Loop Superfamily Protein; Pseudaminic Acid Biosynthesis Protein PseA; Amino Acid Adenylation; ATPase; PP-Loop; PP-Loop Domain-Containing Protein; Polysaccharide Biosynthesis Protein; LPS Biosynthesis Protein PseA-Like Protein; ATPAse Of LPS Biosynthesis

Number of amino acids: Translated: 378; Mature: 378

Protein sequence:

>378_residues
MKFCSNCVMPDTKPGIVLDERGFCNACRTKEVKEKIDWTARYNDLSLIVEDIKAQNNPFYDCIVAVSGGKDSWYQAAVLA
EEFGLKVLCVTLAAHLPTTEGIDNLNEMIKDLNVDHMKITIKPSVFRKIRRKCFLRQGEPNWAEHCAMFSSVVNTALIYD
VPLVVWGEDIAFEFGGLQRSESKPSAIAINKSDLIKEKTIHDWLDNDISERDIFFYKYPDYQKLQDAGVKSIYLGHFVRW
YGRQNYEFVKKRGFTGRREGPLPGNFLDYDNIDEKLCEINIWFKYLKFGFWRATDQTCYDIWNDRMTRDEAVDIVNRLQA
EFPSNDFEHFLRFHDITEEQFWETVEKFRNHDIWEQVDGEWKLKYTLEKSQSDEASNA

Sequences:

>Translated_378_residues
MKFCSNCVMPDTKPGIVLDERGFCNACRTKEVKEKIDWTARYNDLSLIVEDIKAQNNPFYDCIVAVSGGKDSWYQAAVLA
EEFGLKVLCVTLAAHLPTTEGIDNLNEMIKDLNVDHMKITIKPSVFRKIRRKCFLRQGEPNWAEHCAMFSSVVNTALIYD
VPLVVWGEDIAFEFGGLQRSESKPSAIAINKSDLIKEKTIHDWLDNDISERDIFFYKYPDYQKLQDAGVKSIYLGHFVRW
YGRQNYEFVKKRGFTGRREGPLPGNFLDYDNIDEKLCEINIWFKYLKFGFWRATDQTCYDIWNDRMTRDEAVDIVNRLQA
EFPSNDFEHFLRFHDITEEQFWETVEKFRNHDIWEQVDGEWKLKYTLEKSQSDEASNA
>Mature_378_residues
MKFCSNCVMPDTKPGIVLDERGFCNACRTKEVKEKIDWTARYNDLSLIVEDIKAQNNPFYDCIVAVSGGKDSWYQAAVLA
EEFGLKVLCVTLAAHLPTTEGIDNLNEMIKDLNVDHMKITIKPSVFRKIRRKCFLRQGEPNWAEHCAMFSSVVNTALIYD
VPLVVWGEDIAFEFGGLQRSESKPSAIAINKSDLIKEKTIHDWLDNDISERDIFFYKYPDYQKLQDAGVKSIYLGHFVRW
YGRQNYEFVKKRGFTGRREGPLPGNFLDYDNIDEKLCEINIWFKYLKFGFWRATDQTCYDIWNDRMTRDEAVDIVNRLQA
EFPSNDFEHFLRFHDITEEQFWETVEKFRNHDIWEQVDGEWKLKYTLEKSQSDEASNA

Specific function: Unknown

COG id: COG0037

COG function: function code D; Predicted ATPase of the PP-loop superfamily implicated in cell cycle control

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44320; Mature: 44320

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFCSNCVMPDTKPGIVLDERGFCNACRTKEVKEKIDWTARYNDLSLIVEDIKAQNNPFY
CCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHCHHHCCCHHHHHHHHHHCCCCCCE
DCIVAVSGGKDSWYQAAVLAEEFGLKVLCVTLAAHLPTTEGIDNLNEMIKDLNVDHMKIT
EEEEEEECCCCHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEEE
IKPSVFRKIRRKCFLRQGEPNWAEHCAMFSSVVNTALIYDVPLVVWGEDIAFEFGGLQRS
ECHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCHHHEECCCCCCC
ESKPSAIAINKSDLIKEKTIHDWLDNDISERDIFFYKYPDYQKLQDAGVKSIYLGHFVRW
CCCCCEEEECHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHCCCHHHHHHHHHHH
YGRQNYEFVKKRGFTGRREGPLPGNFLDYDNIDEKLCEINIWFKYLKFGFWRATDQTCYD
HCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
IWNDRMTRDEAVDIVNRLQAEFPSNDFEHFLRFHDITEEQFWETVEKFRNHDIWEQVDGE
HHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHCCCC
WKLKYTLEKSQSDEASNA
EEEEEEECCCCCCCCCCC
>Mature Secondary Structure
MKFCSNCVMPDTKPGIVLDERGFCNACRTKEVKEKIDWTARYNDLSLIVEDIKAQNNPFY
CCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHCHHHCCCHHHHHHHHHHCCCCCCE
DCIVAVSGGKDSWYQAAVLAEEFGLKVLCVTLAAHLPTTEGIDNLNEMIKDLNVDHMKIT
EEEEEEECCCCHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEEE
IKPSVFRKIRRKCFLRQGEPNWAEHCAMFSSVVNTALIYDVPLVVWGEDIAFEFGGLQRS
ECHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCHHHEECCCCCCC
ESKPSAIAINKSDLIKEKTIHDWLDNDISERDIFFYKYPDYQKLQDAGVKSIYLGHFVRW
CCCCCEEEECHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHCCCHHHHHHHHHHH
YGRQNYEFVKKRGFTGRREGPLPGNFLDYDNIDEKLCEINIWFKYLKFGFWRATDQTCYD
HCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
IWNDRMTRDEAVDIVNRLQAEFPSNDFEHFLRFHDITEEQFWETVEKFRNHDIWEQVDGE
HHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHCCCC
WKLKYTLEKSQSDEASNA
EEEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA