The gene/protein map for NC_012691 is currently unavailable.
Definition Vibrio vulnificus YJ016 chromosome I, complete sequence.
Accession NC_005139
Length 3,354,505

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The map label for this gene is yejA [C]

Identifier: 37678437

GI number: 37678437

Start: 264329

End: 266161

Strand: Direct

Name: yejA [C]

Synonym: VV0253

Alternate gene names: 37678437

Gene position: 264329-266161 (Clockwise)

Preceding gene: 37678436

Following gene: 37678438

Centisome position: 7.88

GC content: 47.3

Gene sequence:

>1833_bases
ATGATGAAAAAAACCTTACTAACCACAGCGTTATCGCTGATGAGTGCCGGTGTTTACGCCACCACTTTACCCGCGGATGT
GAACTGGCAGACCAACTGGGATGAGCCGTTGTTTGCTTCTTCAGATGCCAAATTTGGTGGGACATTCCGTACTTTCATTC
AAAGCTTTCCACAAACTTTACGCAGTGTTGGACCTGATTCTAACTCAGGATTGCGTTCTTTTTTCCTTGATGAGACGCCT
GCGCTGGTAGATCAGCATCCAGACACGTTGGAGTGGATCCCAGCCTTAGCCAATGAATGGGCCTTTGCAGGGGATAACCG
TACGGTTTACTTCAAATTAAATCCCAATGCCAAATGGTCGGACGGCAAACCTGTGACGGCCGATGATTTCGTTTTTATGC
TCAAGTTCTACCGCTCAAAAGATTTGGTGGCACCTTGGTATAACGAGTACTACACCAATGTGATTGACGATGTGCAGAAA
ATTGATCAGCACACCTTCGCGGCGGTGAGCAAAGTTGAAAAAAACCAAGAAGATCTTCTCTATACCTTAGGTGCGCTTCG
TCCGCGACCTGCACACTTTTATGCCAAGCCAGCAAAAGATGAAAATGGCGATGGTATTGACGATAACTTCGTACGCAAAT
ACAACTTCAAAGCTGAGCCAACCACCAACGCTTACTACCTTGATGACATTAAGAAGGGCAAAAGCGTCACCTTCAAACAC
GTTGGTCAAGATTGGTGGGGTTACAGCAACAAGTATTATCAACACCGTTACAATGTGGAGAAAATCCGTATCACGGTGAT
CCGCGACAACGACATCGCGATGAAGCATTTCGAAAAAGGCGATTTGGATACTTTTGGCCTGATCCTGCCGGATTTGTGGC
ACGACAAATCCAACACAGAACCGTACCAAAAAGGCTACATCGAGAAGTTCTGGGGTTACAACCAAACGCCACAAGGCGCG
GGTGGTCTATGGATGAACGTTGCCACGCCTCTGCTGGACGATCTCAATGTGCGCAAAGGGATCATGCATGCTACCGATTA
CGATGGCATGATCGATAAGATCACCCGTGGTGACTACTCACGCAAACCGCATGCGCTCGGTTCTGGCCACGGTAAATACG
ACTTGCCTAACCCTGTGCCGCCTAAGTTTGATCCGGAATTAGCGATTCGCTACTTTGAAGCGGCGGGCTTTAACCAAATT
GGTGCCGATGGGGTGCGGGTCAACGATAAAGGCCAGCGTCTCAGTTTCGCTATCACGTATGGTTATGCTCACCACACGCC
ACGTATCGCGTATTTGAAAGAGCAAGCGAAGAAAGCGGGATTGGAGTTTGAACTAAAACTGGTGGATGGTTCCTCGGCGT
TTAAGTTCATCCTCGAGAAAAAGCATGAATTGGCCTTCTTAGATATGGGTACTTCCGATGTGCCAGCTTACTGGGAGTAC
TTCCATTCAGCTAACGCCAATCGCCCACAAACCAACAACCACACCAATTTCAGCACGCCTGAACTGGATACATTGATCAT
GGCGTACAAAAACGAATTTGATTTGGAGAAGAAGTACAACTATTCCCATCAAATCCAGCAAATTGTTAGTGATGCGAACC
TGATTGTTCCAGGCTATATGGTGCCGTATACCCGTGTGGGTTACTGGCGCTGGTTAAAGTACCCACAAAAGGCGATGACC
AAAAAATCGGAAGTTTTATTTACCAGTGGTGGCGCGATCGGTTTAGGGACATTCTGGATCGATAGAGACGCTAAGAAAGA
AACCGAAAAAGCCATCAAAGCAGGGAAAGCCTTTGCCCCTGTGACGGTGATTGATGACACCTATAAACTATAA

Upstream 100 bases:

>100_bases
CCTTTATTGGTGAAGCCATTCGTGCAGCTTTTGATCCGAAAAAATTCACCCGTTACGTTTAAATGGTCAATACTGTTGGA
ACGGATAATATAGGGACATA

Downstream 100 bases:

>100_bases
GTTGGCCACAAGAGGGAAGCACGATGCAGGATGATGTGATTCTGAGTGTTAGAGATCTCGAGGTCTCTTTCACTACCGAT
GATGGCCCAGTCAAGGTATT

Product: ABC-type oligopeptide transport system, periplasmic component

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 610; Mature: 610

Protein sequence:

>610_residues
MMKKTLLTTALSLMSAGVYATTLPADVNWQTNWDEPLFASSDAKFGGTFRTFIQSFPQTLRSVGPDSNSGLRSFFLDETP
ALVDQHPDTLEWIPALANEWAFAGDNRTVYFKLNPNAKWSDGKPVTADDFVFMLKFYRSKDLVAPWYNEYYTNVIDDVQK
IDQHTFAAVSKVEKNQEDLLYTLGALRPRPAHFYAKPAKDENGDGIDDNFVRKYNFKAEPTTNAYYLDDIKKGKSVTFKH
VGQDWWGYSNKYYQHRYNVEKIRITVIRDNDIAMKHFEKGDLDTFGLILPDLWHDKSNTEPYQKGYIEKFWGYNQTPQGA
GGLWMNVATPLLDDLNVRKGIMHATDYDGMIDKITRGDYSRKPHALGSGHGKYDLPNPVPPKFDPELAIRYFEAAGFNQI
GADGVRVNDKGQRLSFAITYGYAHHTPRIAYLKEQAKKAGLEFELKLVDGSSAFKFILEKKHELAFLDMGTSDVPAYWEY
FHSANANRPQTNNHTNFSTPELDTLIMAYKNEFDLEKKYNYSHQIQQIVSDANLIVPGYMVPYTRVGYWRWLKYPQKAMT
KKSEVLFTSGGAIGLGTFWIDRDAKKETEKAIKAGKAFAPVTVIDDTYKL

Sequences:

>Translated_610_residues
MMKKTLLTTALSLMSAGVYATTLPADVNWQTNWDEPLFASSDAKFGGTFRTFIQSFPQTLRSVGPDSNSGLRSFFLDETP
ALVDQHPDTLEWIPALANEWAFAGDNRTVYFKLNPNAKWSDGKPVTADDFVFMLKFYRSKDLVAPWYNEYYTNVIDDVQK
IDQHTFAAVSKVEKNQEDLLYTLGALRPRPAHFYAKPAKDENGDGIDDNFVRKYNFKAEPTTNAYYLDDIKKGKSVTFKH
VGQDWWGYSNKYYQHRYNVEKIRITVIRDNDIAMKHFEKGDLDTFGLILPDLWHDKSNTEPYQKGYIEKFWGYNQTPQGA
GGLWMNVATPLLDDLNVRKGIMHATDYDGMIDKITRGDYSRKPHALGSGHGKYDLPNPVPPKFDPELAIRYFEAAGFNQI
GADGVRVNDKGQRLSFAITYGYAHHTPRIAYLKEQAKKAGLEFELKLVDGSSAFKFILEKKHELAFLDMGTSDVPAYWEY
FHSANANRPQTNNHTNFSTPELDTLIMAYKNEFDLEKKYNYSHQIQQIVSDANLIVPGYMVPYTRVGYWRWLKYPQKAMT
KKSEVLFTSGGAIGLGTFWIDRDAKKETEKAIKAGKAFAPVTVIDDTYKL
>Mature_610_residues
MMKKTLLTTALSLMSAGVYATTLPADVNWQTNWDEPLFASSDAKFGGTFRTFIQSFPQTLRSVGPDSNSGLRSFFLDETP
ALVDQHPDTLEWIPALANEWAFAGDNRTVYFKLNPNAKWSDGKPVTADDFVFMLKFYRSKDLVAPWYNEYYTNVIDDVQK
IDQHTFAAVSKVEKNQEDLLYTLGALRPRPAHFYAKPAKDENGDGIDDNFVRKYNFKAEPTTNAYYLDDIKKGKSVTFKH
VGQDWWGYSNKYYQHRYNVEKIRITVIRDNDIAMKHFEKGDLDTFGLILPDLWHDKSNTEPYQKGYIEKFWGYNQTPQGA
GGLWMNVATPLLDDLNVRKGIMHATDYDGMIDKITRGDYSRKPHALGSGHGKYDLPNPVPPKFDPELAIRYFEAAGFNQI
GADGVRVNDKGQRLSFAITYGYAHHTPRIAYLKEQAKKAGLEFELKLVDGSSAFKFILEKKHELAFLDMGTSDVPAYWEY
FHSANANRPQTNNHTNFSTPELDTLIMAYKNEFDLEKKYNYSHQIQQIVSDANLIVPGYMVPYTRVGYWRWLKYPQKAMT
KKSEVLFTSGGAIGLGTFWIDRDAKKETEKAIKAGKAFAPVTVIDDTYKL

Specific function: Probably part of a binding-protein-dependent transport system [H]

COG id: COG4166

COG function: function code E; ABC-type oligopeptide transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 69692; Mature: 69692

Theoretical pI: Translated: 7.32; Mature: 7.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKKTLLTTALSLMSAGVYATTLPADVNWQTNWDEPLFASSDAKFGGTFRTFIQSFPQTL
CCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
RSVGPDSNSGLRSFFLDETPALVDQHPDTLEWIPALANEWAFAGDNRTVYFKLNPNAKWS
HHCCCCCCCCHHHHHCCCCCHHHHCCCCHHHHHHHHHHCCEEECCCEEEEEEECCCCCCC
DGKPVTADDFVFMLKFYRSKDLVAPWYNEYYTNVIDDVQKIDQHTFAAVSKVEKNQEDLL
CCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
YTLGALRPRPAHFYAKPAKDENGDGIDDNFVRKYNFKAEPTTNAYYLDDIKKGKSVTFKH
HHHHCCCCCCCCEEECCCCCCCCCCCCCCCEEEECCCCCCCCCCEEECCCCCCCCEEHHH
VGQDWWGYSNKYYQHRYNVEKIRITVIRDNDIAMKHFEKGDLDTFGLILPDLWHDKSNTE
CCCHHCCCCCCHHHEECCEEEEEEEEEECCCCEEHHCCCCCCCHHHHHHHHHHCCCCCCC
PYQKGYIEKFWGYNQTPQGAGGLWMNVATPLLDDLNVRKGIMHATDYDGMIDKITRGDYS
HHHHHHHHHHCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCC
RKPHALGSGHGKYDLPNPVPPKFDPELAIRYFEAAGFNQIGADGVRVNDKGQRLSFAITY
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEECCCCCEEEEEEEE
GYAHHTPRIAYLKEQAKKAGLEFELKLVDGSSAFKFILEKKHELAFLDMGTSDVPAYWEY
CCCCCCCHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHCCCCEEEEECCCCCCCHHHHH
FHSANANRPQTNNHTNFSTPELDTLIMAYKNEFDLEKKYNYSHQIQQIVSDANLIVPGYM
HHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHCCHHHHHHHHHCCCCEEECCCC
VPYTRVGYWRWLKYPQKAMTKKSEVLFTSGGAIGLGTFWIDRDAKKETEKAIKAGKAFAP
CCCHHHHHHHHHCCCHHHHCCCCCEEEECCCCEEEEEEEECCCHHHHHHHHHHCCCCCCC
VTVIDDTYKL
EEEECCCCCC
>Mature Secondary Structure
MMKKTLLTTALSLMSAGVYATTLPADVNWQTNWDEPLFASSDAKFGGTFRTFIQSFPQTL
CCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
RSVGPDSNSGLRSFFLDETPALVDQHPDTLEWIPALANEWAFAGDNRTVYFKLNPNAKWS
HHCCCCCCCCHHHHHCCCCCHHHHCCCCHHHHHHHHHHCCEEECCCEEEEEEECCCCCCC
DGKPVTADDFVFMLKFYRSKDLVAPWYNEYYTNVIDDVQKIDQHTFAAVSKVEKNQEDLL
CCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
YTLGALRPRPAHFYAKPAKDENGDGIDDNFVRKYNFKAEPTTNAYYLDDIKKGKSVTFKH
HHHHCCCCCCCCEEECCCCCCCCCCCCCCCEEEECCCCCCCCCCEEECCCCCCCCEEHHH
VGQDWWGYSNKYYQHRYNVEKIRITVIRDNDIAMKHFEKGDLDTFGLILPDLWHDKSNTE
CCCHHCCCCCCHHHEECCEEEEEEEEEECCCCEEHHCCCCCCCHHHHHHHHHHCCCCCCC
PYQKGYIEKFWGYNQTPQGAGGLWMNVATPLLDDLNVRKGIMHATDYDGMIDKITRGDYS
HHHHHHHHHHCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCC
RKPHALGSGHGKYDLPNPVPPKFDPELAIRYFEAAGFNQIGADGVRVNDKGQRLSFAITY
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEECCCCCEEEEEEEE
GYAHHTPRIAYLKEQAKKAGLEFELKLVDGSSAFKFILEKKHELAFLDMGTSDVPAYWEY
CCCCCCCHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHCCCCEEEEECCCCCCCHHHHH
FHSANANRPQTNNHTNFSTPELDTLIMAYKNEFDLEKKYNYSHQIQQIVSDANLIVPGYM
HHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHCCHHHHHHHHHCCCCEEECCCC
VPYTRVGYWRWLKYPQKAMTKKSEVLFTSGGAIGLGTFWIDRDAKKETEKAIKAGKAFAP
CCCHHHHHHHHHCCCHHHHCCCCCEEEECCCCEEEEEEEECCCHHHHHHHHHHCCCCCCC
VTVIDDTYKL
EEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10567266 [H]