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The map label for this gene is rmuC [H]

Identifier: 37678360

GI number: 37678360

Start: 186807

End: 188429

Strand: Direct

Name: rmuC [H]

Synonym: VV0176

Alternate gene names: 37678360

Gene position: 186807-188429 (Clockwise)

Preceding gene: 37678358

Following gene: 37678361

Centisome position: 5.57

GC content: 45.96

Gene sequence:

>1623_bases
TTGAAACACGCATCTCTTTTCTTAGAACGCCTTATTATGCAATGGATTATCGATAACCAAGCTTCCCTTCTGCTGACCCT
TTTTTCTTCGCTATCGACCGCAATTTTAGCCGCTTGGTGGCAGCGCCAGAAGCTAGAGGTGGTGAATCAGTTGTTGCAAC
AACAGCTAGAAAGCGAACGACGCTTATCTGCCAGTAAAATCGAACAACTGCAGCACGGAATGCAACAGCTCCAAACAGAA
TTAGATGATTATGATCAGGAGCGCGATCAAGCTGCCTATGAGGTCAAACAGACTCATGGTAAGTTGATGGCCGCAATTGA
AAAACTACGCTACTTCGATGCGGTAAAACAAGAGCGTCAACAATACTTTGATGAGTTAACGGCGCTAAGGGAATGCAACG
CAAAGTTAGAGACACAACTGCGTGAGCAGCAGGCTCGCCATGAGCAGCTGACTCAAGCGAATCAGGAGAAGCTGCAAATT
CTGGAACAAGCAGAGGTGCGCTTGAAACAGCAGTTTGAGCATCTTGCGAATCAACTTTTTGAAGAGAAAACCGCTAAGGT
TGATCAACAAAACCGCCTCAGCTTAGAAGGACTATTATCACCCTTAAAAGAGCAGTTAGAAGGCTTTAAGAAGCAGGTCA
ATGATAGTTTTAGTCATGAGGCAAAAGAACGTCATACGCTCGTGCATGAGTTGAAAAATTTACAACGCTTGAATGAGCAG
ATGACTCGTGAGGCCGTGAATCTCACGCAAGCGCTCAAAGGAGATAATAAACAGCAAGGAAACTGGGGAGAAGTGGTGCT
GGCGCGTGTGCTTGCGGAATCAGGATTACGCGAAGGGCATGAATATCAAACTCAGGTCAGTTTGCAAAATGAAGCGGGTA
AACGTTATCAACCCGATGTGATCGTCTATTTGCCTCAAGATAAGCAAGTGGTGATCGACTCCAAAATGACGTTGGTGGCC
TATGAGCGCTATTTCCATGCGGAGTCGGACAGCGAGCGCGCCATTGAGTTGTCCAATCACCTTGCTGCGATTCGTGCGCA
CATTAAAGGGTTAAGTATAAAAGATTATCACCAGCTCAAAGGTATTCACTCCTTGGACTATGTGCTGATGTTTATACCAG
TCGAACCCGCTTTCCAATTGGCAATACAAGCTGATCCGAGCCTCGTCAAAGACGCGATGGAGCAAAATATCATCTTGGTG
AGTCCAACCACGTTACTGGTTGCTTTGAGAACCATTGATAACCTTTGGCGTAATGAGCGTCAGAGTCAAAACGCGAAGAT
CATTGCACAGCGAGCAAGCAAGCTATACGACAAGCTGCGCTTGTTTGTCGATGATATGCAAAACTTAGGCGGAGCGCTGG
ATAAAGCTAACCAAAGTTACCAAGGGGCAATGAACAAATTGGTGACCGGGCGAGGAAATGTCATTCGTCAGGCGGAAAGT
TTCAAAGAGCTGGGTGTTGAAGTCAAACGCCCTATCTCGACGGATTTAACTCAATTAGCACAAAATGACTCTTTAGTAGA
AAGACATCCCGTTGAGGATAAAGTAAACTATTCGACCGCAGTCTTGGGCCAAGAAAACCATTTCGGCCCTCAATCGAACC
GCACTGCCCAAGAGGAAAAATAA

Upstream 100 bases:

>100_bases
TTCATAAATCCTCAAAATGATAGTCAGCAAGCAAAGCACCTAGTGTAAGCGAGGATTTTCTGTGCAACAAACTGGACATT
TATCCAGTATATAAATACCA

Downstream 100 bases:

>100_bases
TGACGGACATCAGCGTGCAATCGAATACAGCTTTAGAATCATCAGAAACCACGCATTTTGGTTTCACTACCGTAGCGAAA
GAAGAAAAAGTCGCTAAGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 540; Mature: 540

Protein sequence:

>540_residues
MKHASLFLERLIMQWIIDNQASLLLTLFSSLSTAILAAWWQRQKLEVVNQLLQQQLESERRLSASKIEQLQHGMQQLQTE
LDDYDQERDQAAYEVKQTHGKLMAAIEKLRYFDAVKQERQQYFDELTALRECNAKLETQLREQQARHEQLTQANQEKLQI
LEQAEVRLKQQFEHLANQLFEEKTAKVDQQNRLSLEGLLSPLKEQLEGFKKQVNDSFSHEAKERHTLVHELKNLQRLNEQ
MTREAVNLTQALKGDNKQQGNWGEVVLARVLAESGLREGHEYQTQVSLQNEAGKRYQPDVIVYLPQDKQVVIDSKMTLVA
YERYFHAESDSERAIELSNHLAAIRAHIKGLSIKDYHQLKGIHSLDYVLMFIPVEPAFQLAIQADPSLVKDAMEQNIILV
SPTTLLVALRTIDNLWRNERQSQNAKIIAQRASKLYDKLRLFVDDMQNLGGALDKANQSYQGAMNKLVTGRGNVIRQAES
FKELGVEVKRPISTDLTQLAQNDSLVERHPVEDKVNYSTAVLGQENHFGPQSNRTAQEEK

Sequences:

>Translated_540_residues
MKHASLFLERLIMQWIIDNQASLLLTLFSSLSTAILAAWWQRQKLEVVNQLLQQQLESERRLSASKIEQLQHGMQQLQTE
LDDYDQERDQAAYEVKQTHGKLMAAIEKLRYFDAVKQERQQYFDELTALRECNAKLETQLREQQARHEQLTQANQEKLQI
LEQAEVRLKQQFEHLANQLFEEKTAKVDQQNRLSLEGLLSPLKEQLEGFKKQVNDSFSHEAKERHTLVHELKNLQRLNEQ
MTREAVNLTQALKGDNKQQGNWGEVVLARVLAESGLREGHEYQTQVSLQNEAGKRYQPDVIVYLPQDKQVVIDSKMTLVA
YERYFHAESDSERAIELSNHLAAIRAHIKGLSIKDYHQLKGIHSLDYVLMFIPVEPAFQLAIQADPSLVKDAMEQNIILV
SPTTLLVALRTIDNLWRNERQSQNAKIIAQRASKLYDKLRLFVDDMQNLGGALDKANQSYQGAMNKLVTGRGNVIRQAES
FKELGVEVKRPISTDLTQLAQNDSLVERHPVEDKVNYSTAVLGQENHFGPQSNRTAQEEK
>Mature_540_residues
MKHASLFLERLIMQWIIDNQASLLLTLFSSLSTAILAAWWQRQKLEVVNQLLQQQLESERRLSASKIEQLQHGMQQLQTE
LDDYDQERDQAAYEVKQTHGKLMAAIEKLRYFDAVKQERQQYFDELTALRECNAKLETQLREQQARHEQLTQANQEKLQI
LEQAEVRLKQQFEHLANQLFEEKTAKVDQQNRLSLEGLLSPLKEQLEGFKKQVNDSFSHEAKERHTLVHELKNLQRLNEQ
MTREAVNLTQALKGDNKQQGNWGEVVLARVLAESGLREGHEYQTQVSLQNEAGKRYQPDVIVYLPQDKQVVIDSKMTLVA
YERYFHAESDSERAIELSNHLAAIRAHIKGLSIKDYHQLKGIHSLDYVLMFIPVEPAFQLAIQADPSLVKDAMEQNIILV
SPTTLLVALRTIDNLWRNERQSQNAKIIAQRASKLYDKLRLFVDDMQNLGGALDKANQSYQGAMNKLVTGRGNVIRQAES
FKELGVEVKRPISTDLTQLAQNDSLVERHPVEDKVNYSTAVLGQENHFGPQSNRTAQEEK

Specific function: Involved in DNA recombination [H]

COG id: COG1322

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rmuC family [H]

Homologues:

Organism=Escherichia coli, GI1790266, Length=377, Percent_Identity=61.2732095490716, Blast_Score=472, Evalue=1e-134,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003798 [H]

Pfam domain/function: PF02646 RmuC [H]

EC number: NA

Molecular weight: Translated: 62189; Mature: 62189

Theoretical pI: Translated: 6.42; Mature: 6.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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>Mature Secondary Structure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PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]