Definition Vibrio vulnificus YJ016 chromosome I, complete sequence.
Accession NC_005139
Length 3,354,505

Click here to switch to the map view.

The map label for this gene is 37678357

Identifier: 37678357

GI number: 37678357

Start: 184257

End: 184790

Strand: Direct

Name: 37678357

Synonym: VV0173

Alternate gene names: NA

Gene position: 184257-184790 (Clockwise)

Preceding gene: 37678356

Following gene: 37678358

Centisome position: 5.49

GC content: 46.07

Gene sequence:

>534_bases
ATGGGGCTTGATAACGTCGATGTCTGGTTTCAAGATGAAGCAAGATTTGGCCAGCAAAACACGACAACTCGACTTTGGGC
TGAGCGTGGCTCAAGACCAAGAGTGGTAAAACAGCAGCAGTTTGAATATGCGTATTTGTTTGGCTCAGTATGCCCCGCTA
GAGGTATTGGTGAGGCAATGGTCGTTCCTTGGGTTAACAAGAACATTATGGTTGAGCATCTGAAGCAACTCTCCGCGGTG
ACCGAAAAAGGTCGTCACGCAGTGGTCATTATGGATGGCGCGGGTTGGCATACAAATGACATTGCTGAGCCATTTGATAA
TGTCAGTATCATCAAGCTCCCACCCTATTCACCAGAGCTAAACCCGATAGAACAAGTGTGGAGTTGGTTAAGACAACACT
ATCTCGCCAATCAATCTTTTGCGGATTACGAAGACATTGTCTCCAAAGTATGTAGGGCTTGGAATAGTTTTTTGGAATGT
TCGGCCAGAGTCAGACAGATGTGCTCGAGAAGTTGGATAGACCTGAACAGTTAA

Upstream 100 bases:

>100_bases
TGGATAACTTCACGCTCCAAGTACCCTCGTCAATCCTAGCAAATCCAAGACGATTTTAAAAAAATTCAAAATTGAAACGA
TCCTTAAGATCCCCGGTCAC

Downstream 100 bases:

>100_bases
TTTTCCAGATTGGTATTAGCCAATTTTCTGGGCTCTTCCACTCTAGTTGATTTAAAACCCCTAACTGGCTTTAAATCAAT
ACCAAAAACTAAATAGAGAA

Product: transposase and inactivated derivative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 177; Mature: 176

Protein sequence:

>177_residues
MGLDNVDVWFQDEARFGQQNTTTRLWAERGSRPRVVKQQQFEYAYLFGSVCPARGIGEAMVVPWVNKNIMVEHLKQLSAV
TEKGRHAVVIMDGAGWHTNDIAEPFDNVSIIKLPPYSPELNPIEQVWSWLRQHYLANQSFADYEDIVSKVCRAWNSFLEC
SARVRQMCSRSWIDLNS

Sequences:

>Translated_177_residues
MGLDNVDVWFQDEARFGQQNTTTRLWAERGSRPRVVKQQQFEYAYLFGSVCPARGIGEAMVVPWVNKNIMVEHLKQLSAV
TEKGRHAVVIMDGAGWHTNDIAEPFDNVSIIKLPPYSPELNPIEQVWSWLRQHYLANQSFADYEDIVSKVCRAWNSFLEC
SARVRQMCSRSWIDLNS
>Mature_176_residues
GLDNVDVWFQDEARFGQQNTTTRLWAERGSRPRVVKQQQFEYAYLFGSVCPARGIGEAMVVPWVNKNIMVEHLKQLSAVT
EKGRHAVVIMDGAGWHTNDIAEPFDNVSIIKLPPYSPELNPIEQVWSWLRQHYLANQSFADYEDIVSKVCRAWNSFLECS
ARVRQMCSRSWIDLNS

Specific function: Unknown

COG id: COG3335

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20421; Mature: 20290

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLDNVDVWFQDEARFGQQNTTTRLWAERGSRPRVVKQQQFEYAYLFGSVCPARGIGEAM
CCCCCCEEEECCHHHCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEE
VVPWVNKNIMVEHLKQLSAVTEKGRHAVVIMDGAGWHTNDIAEPFDNVSIIKLPPYSPEL
EECCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCC
NPIEQVWSWLRQHYLANQSFADYEDIVSKVCRAWNSFLECSARVRQMCSRSWIDLNS
CHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
GLDNVDVWFQDEARFGQQNTTTRLWAERGSRPRVVKQQQFEYAYLFGSVCPARGIGEAM
CCCCCEEEECCHHHCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEE
VVPWVNKNIMVEHLKQLSAVTEKGRHAVVIMDGAGWHTNDIAEPFDNVSIIKLPPYSPEL
EECCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCC
NPIEQVWSWLRQHYLANQSFADYEDIVSKVCRAWNSFLECSARVRQMCSRSWIDLNS
CHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]