| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is yhhN [C]
Identifier: 37678291
GI number: 37678291
Start: 117383
End: 118003
Strand: Direct
Name: yhhN [C]
Synonym: VV0107
Alternate gene names: 37678291
Gene position: 117383-118003 (Clockwise)
Preceding gene: 37678290
Following gene: 37678292
Centisome position: 3.5
GC content: 46.22
Gene sequence:
>621_bases ATGTGGAGTTGGCTAGCGATAGGCTTATCTGGAATGACATCCGTTTTGGGTGCTCGTCAAGCGAGTCCATTTCAGTCACT GTTTTTTAAAGTGTTCACTCTGGTGTTGTTATTGATCTTGGTGTTGACCCAAGGGCCAGACTCTGGGCACAGCTATTGGA TTGCCGCAGGACTGTTAGTGTCGATTTTTGCCGACACGCTCCATTCTTTGAAATCAAAAAAAACGCTCTATTTTTCAGGC TTTCTCCTCGCGCAGCTTTGTTACAGCAAATCTTTCTGGTTACAACTCAATGGTGATATCGTTTGGTGGCTCCTTGCCTT ACTGTTGGCGGCGAGTATCGTGGCGTTTTTCTTACTCCTTCCTCAATTGGATTCATTGGTTTTTCCTGTCGTGATTATGG GCATTATGCTGGTGCAGTTGGCTTGGGCTGCTGGAGAAGTGTGGCTCCAAGCAAGCAACTTCTCCAATGCGATCGGTTTT ACCGGAACTTTAGTCATGATTTATTCTGCTCTGGCGTATGCGATTCACGGCTATCGAAAACCGATGAAGCGTGCCTATGT TTGGGTGTCGGGCAGTTATTTTGTCGCACATGCTTTGATCGTGGCTTCTATCATCTATTGA
Upstream 100 bases:
>100_bases GCAGTGATTCGCTATCAAGATCCAACTTTCGCCTTTTACTGCTTTACATAATCCTCTTGCTACCTAGACTAGCCGCGTAA CAAAGAGAAGGGTAATACAG
Downstream 100 bases:
>100_bases GCTGTTTTAGGTCAAAACACGATTTTTATAAAAGGTTAAGCTGGGGTCACTTGACGTGTTACAGGACGCTTAATCCATGA ATGATATCCATGCTCACAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 206; Mature: 206
Protein sequence:
>206_residues MWSWLAIGLSGMTSVLGARQASPFQSLFFKVFTLVLLLILVLTQGPDSGHSYWIAAGLLVSIFADTLHSLKSKKTLYFSG FLLAQLCYSKSFWLQLNGDIVWWLLALLLAASIVAFFLLLPQLDSLVFPVVIMGIMLVQLAWAAGEVWLQASNFSNAIGF TGTLVMIYSALAYAIHGYRKPMKRAYVWVSGSYFVAHALIVASIIY
Sequences:
>Translated_206_residues MWSWLAIGLSGMTSVLGARQASPFQSLFFKVFTLVLLLILVLTQGPDSGHSYWIAAGLLVSIFADTLHSLKSKKTLYFSG FLLAQLCYSKSFWLQLNGDIVWWLLALLLAASIVAFFLLLPQLDSLVFPVVIMGIMLVQLAWAAGEVWLQASNFSNAIGF TGTLVMIYSALAYAIHGYRKPMKRAYVWVSGSYFVAHALIVASIIY >Mature_206_residues MWSWLAIGLSGMTSVLGARQASPFQSLFFKVFTLVLLLILVLTQGPDSGHSYWIAAGLLVSIFADTLHSLKSKKTLYFSG FLLAQLCYSKSFWLQLNGDIVWWLLALLLAASIVAFFLLLPQLDSLVFPVVIMGIMLVQLAWAAGEVWLQASNFSNAIGF TGTLVMIYSALAYAIHGYRKPMKRAYVWVSGSYFVAHALIVASIIY
Specific function: Unknown
COG id: COG3714
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22783; Mature: 22783
Theoretical pI: Translated: 9.71; Mature: 9.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWSWLAIGLSGMTSVLGARQASPFQSLFFKVFTLVLLLILVLTQGPDSGHSYWIAAGLLV CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH SIFADTLHSLKSKKTLYFSGFLLAQLCYSKSFWLQLNGDIVWWLLALLLAASIVAFFLLL HHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHH PQLDSLVFPVVIMGIMLVQLAWAAGEVWLQASNFSNAIGFTGTLVMIYSALAYAIHGYRK HHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHH PMKRAYVWVSGSYFVAHALIVASIIY HHHHEEEEECCHHHHHHHHHHHHHCC >Mature Secondary Structure MWSWLAIGLSGMTSVLGARQASPFQSLFFKVFTLVLLLILVLTQGPDSGHSYWIAAGLLV CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH SIFADTLHSLKSKKTLYFSGFLLAQLCYSKSFWLQLNGDIVWWLLALLLAASIVAFFLLL HHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHH PQLDSLVFPVVIMGIMLVQLAWAAGEVWLQASNFSNAIGFTGTLVMIYSALAYAIHGYRK HHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHH PMKRAYVWVSGSYFVAHALIVASIIY HHHHEEEEECCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA