| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is yiaH [C]
Identifier: 37678287
GI number: 37678287
Start: 114408
End: 115421
Strand: Direct
Name: yiaH [C]
Synonym: VV0103
Alternate gene names: 37678287
Gene position: 114408-115421 (Clockwise)
Preceding gene: 37678286
Following gene: 37678289
Centisome position: 3.41
GC content: 50.69
Gene sequence:
>1014_bases ATGCGCGAAAGAGTTCAGTTTTTTGATTTGCTACGATGTGTCGCGGCGGTGGCCGTGATCGCCATTCATGTGCTTGCGCC TTATCGTCATGAGTTAGGGGTGATTCCTTTTGATCAATGGGTGACGGCCGTTGGCATCAATGGTATTTCTCGTTGGGCGG TACCGGTTTTTATTCTTATCACTGGCGCCCTGATGCTCAGTGACACTCGGCCATTTGATCTGCCTTATTATGCTCGTCGT CGTTTAGGTAAGGTGCTGATCCCTTTTCTCTTTTGGTCGTTGTTCTATGCGCTCCTCTCCGGCTTGAGTGCGAGCGGTTT TGATAGCAGCAAAGTGACAGAAGTGCTCAGCAACAGCCCAGAGCATGCCACCTATTACCATCTTGGTTTCTTCTATTATT TTATTCCGCTCTATTTTGTGATTCCGATGTTCCAGTGGCTTGTTCGCCAGCAACGTCAGGACATCCTCTATCTCTTTACC GCGTTATGGTTGTTCACCACTGTGTTGTATCTGGCGGGCATCGATGGCCCTTGGAGCTACGAGCTATGGCTGTACAGTGG CTACCTTCCTCTTGGCTATCTGCTCTTTAGCAAAGTCCCGAATCAACGCTCAGTGGTCGTTGGGTCGGTGCTGCTGGGGG GAATGGCATTGGCTGCCACGGTTATCATGGTGGTGAGTAATAGCCTTGCTGCAGGGGAATACACCGTCGGGCGTTGGTTG TCGTATAAAACCATTAATGTGGTATTGGCCGCGTCGATGGTGTTTGTGCTGTGTCGCTCTGTGGGCGAGCGGTTGTCGGC TCAATGGCAAAAGTGGGTGGCGTTAATCAGCCGCCACAGTTTAGGCATCTATTTATTGCATCCTATTTTTCTATGGCCAA TGAAAGAGTTGGGCTGGTATCAGGGTCATCCTGCGTGGGTCATCCCGTTATGGGTCGTGCTGAGTGGGGCGGGTGCCTTA GCGTTGAGTTATCTATTTTCGCTCTCCGCTAAGACACGTTGGTTATTGCCTTAG
Upstream 100 bases:
>100_bases ATCGCAGTGTGTGAATTCTAACCAAAAGCTGACGCATGATTTCATGCGTCAGCTTTTTTTATTGCTATAGTCAAAGCCAT GAAAAGCAAGAGGATAGAGA
Downstream 100 bases:
>100_bases CGCTTCAGGGCAAAGTGGAGAAACTTATCGCCCTTGTAGGTGAGTTCCCCTTTATCGCCGGGGTTAAGAGCGTGGAAATA GTGTACCCCAACCTGAAACT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 337; Mature: 337
Protein sequence:
>337_residues MRERVQFFDLLRCVAAVAVIAIHVLAPYRHELGVIPFDQWVTAVGINGISRWAVPVFILITGALMLSDTRPFDLPYYARR RLGKVLIPFLFWSLFYALLSGLSASGFDSSKVTEVLSNSPEHATYYHLGFFYYFIPLYFVIPMFQWLVRQQRQDILYLFT ALWLFTTVLYLAGIDGPWSYELWLYSGYLPLGYLLFSKVPNQRSVVVGSVLLGGMALAATVIMVVSNSLAAGEYTVGRWL SYKTINVVLAASMVFVLCRSVGERLSAQWQKWVALISRHSLGIYLLHPIFLWPMKELGWYQGHPAWVIPLWVVLSGAGAL ALSYLFSLSAKTRWLLP
Sequences:
>Translated_337_residues MRERVQFFDLLRCVAAVAVIAIHVLAPYRHELGVIPFDQWVTAVGINGISRWAVPVFILITGALMLSDTRPFDLPYYARR RLGKVLIPFLFWSLFYALLSGLSASGFDSSKVTEVLSNSPEHATYYHLGFFYYFIPLYFVIPMFQWLVRQQRQDILYLFT ALWLFTTVLYLAGIDGPWSYELWLYSGYLPLGYLLFSKVPNQRSVVVGSVLLGGMALAATVIMVVSNSLAAGEYTVGRWL SYKTINVVLAASMVFVLCRSVGERLSAQWQKWVALISRHSLGIYLLHPIFLWPMKELGWYQGHPAWVIPLWVVLSGAGAL ALSYLFSLSAKTRWLLP >Mature_337_residues MRERVQFFDLLRCVAAVAVIAIHVLAPYRHELGVIPFDQWVTAVGINGISRWAVPVFILITGALMLSDTRPFDLPYYARR RLGKVLIPFLFWSLFYALLSGLSASGFDSSKVTEVLSNSPEHATYYHLGFFYYFIPLYFVIPMFQWLVRQQRQDILYLFT ALWLFTTVLYLAGIDGPWSYELWLYSGYLPLGYLLFSKVPNQRSVVVGSVLLGGMALAATVIMVVSNSLAAGEYTVGRWL SYKTINVVLAASMVFVLCRSVGERLSAQWQKWVALISRHSLGIYLLHPIFLWPMKELGWYQGHPAWVIPLWVVLSGAGAL ALSYLFSLSAKTRWLLP
Specific function: Unknown
COG id: COG3274
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38269; Mature: 38269
Theoretical pI: Translated: 9.70; Mature: 9.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRERVQFFDLLRCVAAVAVIAIHVLAPYRHELGVIPFDQWVTAVGINGISRWAVPVFILI CCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHH TGALMLSDTRPFDLPYYARRRLGKVLIPFLFWSLFYALLSGLSASGFDSSKVTEVLSNSP HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCC EHATYYHLGFFYYFIPLYFVIPMFQWLVRQQRQDILYLFTALWLFTTVLYLAGIDGPWSY CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE ELWLYSGYLPLGYLLFSKVPNQRSVVVGSVLLGGMALAATVIMVVSNSLAAGEYTVGRWL EEEEEECCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH SYKTINVVLAASMVFVLCRSVGERLSAQWQKWVALISRHSLGIYLLHPIFLWPMKELGWY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC QGHPAWVIPLWVVLSGAGALALSYLFSLSAKTRWLLP CCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MRERVQFFDLLRCVAAVAVIAIHVLAPYRHELGVIPFDQWVTAVGINGISRWAVPVFILI CCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHH TGALMLSDTRPFDLPYYARRRLGKVLIPFLFWSLFYALLSGLSASGFDSSKVTEVLSNSP HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCC EHATYYHLGFFYYFIPLYFVIPMFQWLVRQQRQDILYLFTALWLFTTVLYLAGIDGPWSY CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE ELWLYSGYLPLGYLLFSKVPNQRSVVVGSVLLGGMALAATVIMVVSNSLAAGEYTVGRWL EEEEEECCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH SYKTINVVLAASMVFVLCRSVGERLSAQWQKWVALISRHSLGIYLLHPIFLWPMKELGWY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC QGHPAWVIPLWVVLSGAGALALSYLFSLSAKTRWLLP CCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA