| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is 37678256
Identifier: 37678256
GI number: 37678256
Start: 85067
End: 85558
Strand: Direct
Name: 37678256
Synonym: VV0072
Alternate gene names: NA
Gene position: 85067-85558 (Clockwise)
Preceding gene: 37678255
Following gene: 37678259
Centisome position: 2.54
GC content: 47.97
Gene sequence:
>492_bases ATGACAAAACGCTTTTGTAAGATGGATAGAAGAGAGATCGCCAGTCAATTGGGTGAGATTCATCAGTTGGTTGCAGCGCC CAAATACCTTTGCCGTTCTTGTGCGCGTGCGTCTTCATCGAAAAGTTCGCTGTGCAAGCCGCAAGCCATTCCGAGCCTAA AATCGAAAGCCAAACCCATGGCGGTAAAGGCTGCCGCGTTGCCCGAGCCAATAGCGGAGGGGCAACGCCCGCAAACATTG CTGACGGCGGAGTCGGTGAGTGCGTTTGACATTAATTTGCCATCGCTGGGTAAAAAACAACTTAAGCAAGCCAAACAGGC GCTGAAAAAACAGCGCAAATACCATAAGAAACTGGCGAAGTTAGCCAAGAAGAAAGTCAAACAGCTGCAAAAGCGTGAAA AGTTGGAAGGAAAACTCAACAAATACAACGGCATTTTACGAGTGTTAAGCCACAAACAAGTATTGCAAGGCAGTGCCGAT CAAGTGCACTAA
Upstream 100 bases:
>100_bases GCGCTTGCCAATTTACCGCACTCGCTGTATATCTAACTAAGAATTATTATTATTCAAATTGTCGGTAATGTACAGGCATG GTTTGTGTTGGAGTAGTCGC
Downstream 100 bases:
>100_bases GCGTGCTTAAGCAAGAATATTTAGTAAGAATAATGACTCAGCCCACCGAATGGTGGGCTGAGTGCATGTGGGTCATTGAA ACTAGGTCAATGCGAGACAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 163; Mature: 162
Protein sequence:
>163_residues MTKRFCKMDRREIASQLGEIHQLVAAPKYLCRSCARASSSKSSLCKPQAIPSLKSKAKPMAVKAAALPEPIAEGQRPQTL LTAESVSAFDINLPSLGKKQLKQAKQALKKQRKYHKKLAKLAKKKVKQLQKREKLEGKLNKYNGILRVLSHKQVLQGSAD QVH
Sequences:
>Translated_163_residues MTKRFCKMDRREIASQLGEIHQLVAAPKYLCRSCARASSSKSSLCKPQAIPSLKSKAKPMAVKAAALPEPIAEGQRPQTL LTAESVSAFDINLPSLGKKQLKQAKQALKKQRKYHKKLAKLAKKKVKQLQKREKLEGKLNKYNGILRVLSHKQVLQGSAD QVH >Mature_162_residues TKRFCKMDRREIASQLGEIHQLVAAPKYLCRSCARASSSKSSLCKPQAIPSLKSKAKPMAVKAAALPEPIAEGQRPQTLL TAESVSAFDINLPSLGKKQLKQAKQALKKQRKYHKKLAKLAKKKVKQLQKREKLEGKLNKYNGILRVLSHKQVLQGSADQ VH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18165; Mature: 18034
Theoretical pI: Translated: 11.12; Mature: 11.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKRFCKMDRREIASQLGEIHQLVAAPKYLCRSCARASSSKSSLCKPQAIPSLKSKAKPM CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCHHHHHHCCCH AVKAAALPEPIAEGQRPQTLLTAESVSAFDINLPSLGKKQLKQAKQALKKQRKYHKKLAK HHHHHHCCCHHHCCCCCCHHHHHHCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH LAKKKVKQLQKREKLEGKLNKYNGILRVLSHKQVLQGSADQVH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure TKRFCKMDRREIASQLGEIHQLVAAPKYLCRSCARASSSKSSLCKPQAIPSLKSKAKPM CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCHHHHHHCCCH AVKAAALPEPIAEGQRPQTLLTAESVSAFDINLPSLGKKQLKQAKQALKKQRKYHKKLAK HHHHHHCCCHHHCCCCCCHHHHHHCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH LAKKKVKQLQKREKLEGKLNKYNGILRVLSHKQVLQGSADQVH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA