Definition Vibrio vulnificus YJ016 chromosome I, complete sequence.
Accession NC_005139
Length 3,354,505

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The map label for this gene is 37678232

Identifier: 37678232

GI number: 37678232

Start: 56490

End: 57434

Strand: Direct

Name: 37678232

Synonym: VV0048

Alternate gene names: NA

Gene position: 56490-57434 (Clockwise)

Preceding gene: 37678231

Following gene: 37678234

Centisome position: 1.68

GC content: 47.94

Gene sequence:

>945_bases
ATGGAACTAAGCAAATCGGCACGCTTGCCGATCTTCAAACCTCAACGATTGTGGTTGATGGCGGCACTGTGTTTCTTTGG
TGTTGCTACTCCAGCAGCGGCGGAGGGCTTTTTATGTGAAGCCACACAGGCAAGCACCAACGAATTACCCATGTTAGATA
AAGCCTGCCCTATTGGTGATGGTGTTTGGGGTAAAAAAGCGCCCAAAAGCGGCAAAGAGGATTTCTTTTGGATTCAATGC
GGTATTTTAAATCAGCCAATGCCACTGGCCGACGCCAAACCGCTTTACAAGCAGATCACCACCGATGTGTGGATGAAACC
TGAAAACAAAACCTATCGTTGTTTGATTGGCCCGTATCAATCTTTTGCTCAAGCGAGCAAAGATCTTAAACAGGTCAAAA
AACTGGGCGATTACCGAGAAGCCTTTATTCGAGTCGTTAAGCCACATTCTGCGGTAAAACCGGTCACAGCAAGCAAAGAA
CAGAAAGCGATAACCAAGCCCACCGCCCCAAAAGCACAACCGAAAGCGCCGGCTGCGGCCAACAAGCCAATGGCAGCTCC
TGCACAGGCGACCTTGGCCACAACGCCAGCTAAGCGTAGTAACGATGACTCATCATCGATCGATATTCGTAAAAGTGCCG
AGTTAAAAGGTCGTACTTATGCAGTGCCTTATTTGATGGATGATGAGCACCAGTTTTATATGGAACACAACCAAGCATGG
AATCGCTTGGATTACGGCAGTGCGGAAGTGGTGTGCGGCGATTTGCACATGCGTTTGTTAACTGAAGAGGAATTTTTTAC
CCTGCTGGATTCAAAAGTGATGGAAAACCAGCAGTGGCCAATGCAATTGCCCTATTGGGGAAGAGGAAAAAAAGGCTTCT
TTACCGATGGCCGTGTGACGCAGGTAAAAGGCTCTTCGCTGTTGAATGTGCTGTGTGTGAAGTAG

Upstream 100 bases:

>100_bases
ATTCACCAGGACGCGGCAAATTTTTGGCCTTGCAACGTGTTGTAGGCAGCAGTCTGAGCGTCACTGAGCAATTCATTGAT
GAAACGGGTAGAGTGAAGTT

Downstream 100 bases:

>100_bases
TTGGATGAAATCAAAAACAAATAAGCCCCGCGATGCGGGGCTTACATTATGATGTCTCTAATTCGTCATTAAAGGCATTG
CTTTAACCAGTTTATCCATG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 314; Mature: 314

Protein sequence:

>314_residues
MELSKSARLPIFKPQRLWLMAALCFFGVATPAAAEGFLCEATQASTNELPMLDKACPIGDGVWGKKAPKSGKEDFFWIQC
GILNQPMPLADAKPLYKQITTDVWMKPENKTYRCLIGPYQSFAQASKDLKQVKKLGDYREAFIRVVKPHSAVKPVTASKE
QKAITKPTAPKAQPKAPAAANKPMAAPAQATLATTPAKRSNDDSSSIDIRKSAELKGRTYAVPYLMDDEHQFYMEHNQAW
NRLDYGSAEVVCGDLHMRLLTEEEFFTLLDSKVMENQQWPMQLPYWGRGKKGFFTDGRVTQVKGSSLLNVLCVK

Sequences:

>Translated_314_residues
MELSKSARLPIFKPQRLWLMAALCFFGVATPAAAEGFLCEATQASTNELPMLDKACPIGDGVWGKKAPKSGKEDFFWIQC
GILNQPMPLADAKPLYKQITTDVWMKPENKTYRCLIGPYQSFAQASKDLKQVKKLGDYREAFIRVVKPHSAVKPVTASKE
QKAITKPTAPKAQPKAPAAANKPMAAPAQATLATTPAKRSNDDSSSIDIRKSAELKGRTYAVPYLMDDEHQFYMEHNQAW
NRLDYGSAEVVCGDLHMRLLTEEEFFTLLDSKVMENQQWPMQLPYWGRGKKGFFTDGRVTQVKGSSLLNVLCVK
>Mature_314_residues
MELSKSARLPIFKPQRLWLMAALCFFGVATPAAAEGFLCEATQASTNELPMLDKACPIGDGVWGKKAPKSGKEDFFWIQC
GILNQPMPLADAKPLYKQITTDVWMKPENKTYRCLIGPYQSFAQASKDLKQVKKLGDYREAFIRVVKPHSAVKPVTASKE
QKAITKPTAPKAQPKAPAAANKPMAAPAQATLATTPAKRSNDDSSSIDIRKSAELKGRTYAVPYLMDDEHQFYMEHNQAW
NRLDYGSAEVVCGDLHMRLLTEEEFFTLLDSKVMENQQWPMQLPYWGRGKKGFFTDGRVTQVKGSSLLNVLCVK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35041; Mature: 35041

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELSKSARLPIFKPQRLWLMAALCFFGVATPAAAEGFLCEATQASTNELPMLDKACPIGD
CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCC
GVWGKKAPKSGKEDFFWIQCGILNQPMPLADAKPLYKQITTDVWMKPENKTYRCLIGPYQ
CCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHEECCCCCEEEEEECCHH
SFAQASKDLKQVKKLGDYREAFIRVVKPHSAVKPVTASKEQKAITKPTAPKAQPKAPAAA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCC
NKPMAAPAQATLATTPAKRSNDDSSSIDIRKSAELKGRTYAVPYLMDDEHQFYMEHNQAW
CCCCCCCCCCEEEECCCCCCCCCCCCEEEEECCCCCCCEEEECEEECCCHHHHHHHHHHH
NRLDYGSAEVVCGDLHMRLLTEEEFFTLLDSKVMENQQWPMQLPYWGRGKKGFFTDGRVT
CCCCCCCCEEEEECHHEEHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCEE
QVKGSSLLNVLCVK
EECCCCEEEEEECC
>Mature Secondary Structure
MELSKSARLPIFKPQRLWLMAALCFFGVATPAAAEGFLCEATQASTNELPMLDKACPIGD
CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCC
GVWGKKAPKSGKEDFFWIQCGILNQPMPLADAKPLYKQITTDVWMKPENKTYRCLIGPYQ
CCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHEECCCCCEEEEEECCHH
SFAQASKDLKQVKKLGDYREAFIRVVKPHSAVKPVTASKEQKAITKPTAPKAQPKAPAAA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCC
NKPMAAPAQATLATTPAKRSNDDSSSIDIRKSAELKGRTYAVPYLMDDEHQFYMEHNQAW
CCCCCCCCCCEEEECCCCCCCCCCCCEEEEECCCCCCCEEEECEEECCCHHHHHHHHHHH
NRLDYGSAEVVCGDLHMRLLTEEEFFTLLDSKVMENQQWPMQLPYWGRGKKGFFTDGRVT
CCCCCCCCEEEEECHHEEHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCEE
QVKGSSLLNVLCVK
EECCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA