| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
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The map label for this gene is ygjT [C]
Identifier: 37523978
GI number: 37523978
Start: 4634918
End: 4635931
Strand: Direct
Name: ygjT [C]
Synonym: glr4409
Alternate gene names: 37523978
Gene position: 4634918-4635931 (Clockwise)
Preceding gene: 37523977
Following gene: 37523982
Centisome position: 99.48
GC content: 56.41
Gene sequence:
>1014_bases GTGGGGTCTGCCTGTCAGATCCGATACCTGCGGTCACTGCTGGAGGTGAATATGGATTCTTTGTGGATCTGGGTTGGTTT CAACGCTTTTGTGCTGGGGATGCTAGCCCTCGACCTGGGGGTGTTTCACCGCAAATCCCACGCGGTTTCTTTTAAGGAAG CCCTCACCTGGAGCGGCGTCTGGATCGCTCTGGCGATGGTTTTCAACGTTGGTCTTTATTTTTGGATGGGACCGGAGCCG GCGCTCGAATTCTTTACCGGATACCTGATCGAAAAATCGCTGAGCGTCGACAATATCTTTGTGTTCGTGCTCATCTTTTC GGCCTTCAGCGTACCGGCCATCTATCAGCATCGGGTGCTCTTTTGGGGGGTGCTGGGGGCGCTGGTGATGCGCGGCATTT TGATCTTTGCCGGTGCGGCTCTGTTGAAGGAGTTTCACTGGATCATCTACATCTTCGGGGCGTTTTTGGTGTTCACCGGT ATCAAGATGGCTTTTCCCGAAAAAGAAGAAAAGGACATCACCCAGAACCCGGTGCTCAAGCTGGTGCGTCGGTTGATCCC GGTCAGCGACAACTACGTCGAAGATCGCTTTTTCATTCGCAGAGCGGGTCGGTGGGTGGCCACCCCGCTGTTTCTGGTGC TGCTGCTGGTGGAGACTACCGATCTTATCTTCGCGGTCGACTCGATCCCGGCCATCTTCGCGGTCACGACCGACCCGTTT ATCGTTTACACCTCGAACGTGTTCGCCATCCTCGGTCTGCGCTCGCTGTACTTCGTGCTGGCCGGTGTGGTGGGCAAGTT CCACTACTTGAAGCTGGCGCTGTCGGTCATTCTGACTTTTGTCGGCACCAAGATGCTGCTCATCGACATCTTCAAAATCC CGATCGCCGTCTCGCTGTTGGTGATCGTGAGCGTGCTGGCCGTTGCGGTTGTCGCTTCGATCATGCGCGCCCGCCTGCTC GATAAGGAGCGTGAACGCCAGGAGCGCGAACTGGCGCTTGACCGGCGCGAGTAG
Upstream 100 bases:
>100_bases CGCGCTTGCGGGGCAGTCGGTCGTCAACCCGAAGCGTTTGCTTCCGGTCGATTGCATGTGCCGAGGCACGATTGGCGAGA CCACCACGACGAAAACTGCC
Downstream 100 bases:
>100_bases GCGCCTGCAGATTGCTATGCGGCCAGGAGATTTTGCTTCTGGCCGCTCGTTATTCGGGAAAGATGCCGGTGTTGGACACT CCAGGGTCGCTCAGAACACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 337; Mature: 336
Protein sequence:
>337_residues MGSACQIRYLRSLLEVNMDSLWIWVGFNAFVLGMLALDLGVFHRKSHAVSFKEALTWSGVWIALAMVFNVGLYFWMGPEP ALEFFTGYLIEKSLSVDNIFVFVLIFSAFSVPAIYQHRVLFWGVLGALVMRGILIFAGAALLKEFHWIIYIFGAFLVFTG IKMAFPEKEEKDITQNPVLKLVRRLIPVSDNYVEDRFFIRRAGRWVATPLFLVLLLVETTDLIFAVDSIPAIFAVTTDPF IVYTSNVFAILGLRSLYFVLAGVVGKFHYLKLALSVILTFVGTKMLLIDIFKIPIAVSLLVIVSVLAVAVVASIMRARLL DKERERQERELALDRRE
Sequences:
>Translated_337_residues MGSACQIRYLRSLLEVNMDSLWIWVGFNAFVLGMLALDLGVFHRKSHAVSFKEALTWSGVWIALAMVFNVGLYFWMGPEP ALEFFTGYLIEKSLSVDNIFVFVLIFSAFSVPAIYQHRVLFWGVLGALVMRGILIFAGAALLKEFHWIIYIFGAFLVFTG IKMAFPEKEEKDITQNPVLKLVRRLIPVSDNYVEDRFFIRRAGRWVATPLFLVLLLVETTDLIFAVDSIPAIFAVTTDPF IVYTSNVFAILGLRSLYFVLAGVVGKFHYLKLALSVILTFVGTKMLLIDIFKIPIAVSLLVIVSVLAVAVVASIMRARLL DKERERQERELALDRRE >Mature_336_residues GSACQIRYLRSLLEVNMDSLWIWVGFNAFVLGMLALDLGVFHRKSHAVSFKEALTWSGVWIALAMVFNVGLYFWMGPEPA LEFFTGYLIEKSLSVDNIFVFVLIFSAFSVPAIYQHRVLFWGVLGALVMRGILIFAGAALLKEFHWIIYIFGAFLVFTGI KMAFPEKEEKDITQNPVLKLVRRLIPVSDNYVEDRFFIRRAGRWVATPLFLVLLLVETTDLIFAVDSIPAIFAVTTDPFI VYTSNVFAILGLRSLYFVLAGVVGKFHYLKLALSVILTFVGTKMLLIDIFKIPIAVSLLVIVSVLAVAVVASIMRARLLD KERERQERELALDRRE
Specific function: Unknown
COG id: COG0861
COG function: function code P; Membrane protein TerC, possibly involved in tellurium resistance
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the terC family [H]
Homologues:
Organism=Escherichia coli, GI48994922, Length=311, Percent_Identity=50.8038585209003, Blast_Score=299, Evalue=2e-82,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005496 - InterPro: IPR022369 [H]
Pfam domain/function: PF03741 TerC [H]
EC number: NA
Molecular weight: Translated: 38188; Mature: 38057
Theoretical pI: Translated: 9.45; Mature: 9.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSACQIRYLRSLLEVNMDSLWIWVGFNAFVLGMLALDLGVFHRKSHAVSFKEALTWSGV CCCCHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WIALAMVFNVGLYFWMGPEPALEFFTGYLIEKSLSVDNIFVFVLIFSAFSVPAIYQHRVL HHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHH FWGVLGALVMRGILIFAGAALLKEFHWIIYIFGAFLVFTGIKMAFPEKEEKDITQNPVLK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCHHHH LVRRLIPVSDNYVEDRFFIRRAGRWVATPLFLVLLLVETTDLIFAVDSIPAIFAVTTDPF HHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHEECCCCCEEEEEECCCE IVYTSNVFAILGLRSLYFVLAGVVGKFHYLKLALSVILTFVGTKMLLIDIFKIPIAVSLL EEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VIVSVLAVAVVASIMRARLLDKERERQERELALDRRE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure GSACQIRYLRSLLEVNMDSLWIWVGFNAFVLGMLALDLGVFHRKSHAVSFKEALTWSGV CCCHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WIALAMVFNVGLYFWMGPEPALEFFTGYLIEKSLSVDNIFVFVLIFSAFSVPAIYQHRVL HHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHH FWGVLGALVMRGILIFAGAALLKEFHWIIYIFGAFLVFTGIKMAFPEKEEKDITQNPVLK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCHHHH LVRRLIPVSDNYVEDRFFIRRAGRWVATPLFLVLLLVETTDLIFAVDSIPAIFAVTTDPF HHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHEECCCCCEEEEEECCCE IVYTSNVFAILGLRSLYFVLAGVVGKFHYLKLALSVILTFVGTKMLLIDIFKIPIAVSLL EEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VIVSVLAVAVVASIMRARLLDKERERQERELALDRRE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA