Definition Gloeobacter violaceus PCC 7421 chromosome, complete genome.
Accession NC_005125
Length 4,659,019

Click here to switch to the map view.

The map label for this gene is ygjT [C]

Identifier: 37523978

GI number: 37523978

Start: 4634918

End: 4635931

Strand: Direct

Name: ygjT [C]

Synonym: glr4409

Alternate gene names: 37523978

Gene position: 4634918-4635931 (Clockwise)

Preceding gene: 37523977

Following gene: 37523982

Centisome position: 99.48

GC content: 56.41

Gene sequence:

>1014_bases
GTGGGGTCTGCCTGTCAGATCCGATACCTGCGGTCACTGCTGGAGGTGAATATGGATTCTTTGTGGATCTGGGTTGGTTT
CAACGCTTTTGTGCTGGGGATGCTAGCCCTCGACCTGGGGGTGTTTCACCGCAAATCCCACGCGGTTTCTTTTAAGGAAG
CCCTCACCTGGAGCGGCGTCTGGATCGCTCTGGCGATGGTTTTCAACGTTGGTCTTTATTTTTGGATGGGACCGGAGCCG
GCGCTCGAATTCTTTACCGGATACCTGATCGAAAAATCGCTGAGCGTCGACAATATCTTTGTGTTCGTGCTCATCTTTTC
GGCCTTCAGCGTACCGGCCATCTATCAGCATCGGGTGCTCTTTTGGGGGGTGCTGGGGGCGCTGGTGATGCGCGGCATTT
TGATCTTTGCCGGTGCGGCTCTGTTGAAGGAGTTTCACTGGATCATCTACATCTTCGGGGCGTTTTTGGTGTTCACCGGT
ATCAAGATGGCTTTTCCCGAAAAAGAAGAAAAGGACATCACCCAGAACCCGGTGCTCAAGCTGGTGCGTCGGTTGATCCC
GGTCAGCGACAACTACGTCGAAGATCGCTTTTTCATTCGCAGAGCGGGTCGGTGGGTGGCCACCCCGCTGTTTCTGGTGC
TGCTGCTGGTGGAGACTACCGATCTTATCTTCGCGGTCGACTCGATCCCGGCCATCTTCGCGGTCACGACCGACCCGTTT
ATCGTTTACACCTCGAACGTGTTCGCCATCCTCGGTCTGCGCTCGCTGTACTTCGTGCTGGCCGGTGTGGTGGGCAAGTT
CCACTACTTGAAGCTGGCGCTGTCGGTCATTCTGACTTTTGTCGGCACCAAGATGCTGCTCATCGACATCTTCAAAATCC
CGATCGCCGTCTCGCTGTTGGTGATCGTGAGCGTGCTGGCCGTTGCGGTTGTCGCTTCGATCATGCGCGCCCGCCTGCTC
GATAAGGAGCGTGAACGCCAGGAGCGCGAACTGGCGCTTGACCGGCGCGAGTAG

Upstream 100 bases:

>100_bases
CGCGCTTGCGGGGCAGTCGGTCGTCAACCCGAAGCGTTTGCTTCCGGTCGATTGCATGTGCCGAGGCACGATTGGCGAGA
CCACCACGACGAAAACTGCC

Downstream 100 bases:

>100_bases
GCGCCTGCAGATTGCTATGCGGCCAGGAGATTTTGCTTCTGGCCGCTCGTTATTCGGGAAAGATGCCGGTGTTGGACACT
CCAGGGTCGCTCAGAACACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 337; Mature: 336

Protein sequence:

>337_residues
MGSACQIRYLRSLLEVNMDSLWIWVGFNAFVLGMLALDLGVFHRKSHAVSFKEALTWSGVWIALAMVFNVGLYFWMGPEP
ALEFFTGYLIEKSLSVDNIFVFVLIFSAFSVPAIYQHRVLFWGVLGALVMRGILIFAGAALLKEFHWIIYIFGAFLVFTG
IKMAFPEKEEKDITQNPVLKLVRRLIPVSDNYVEDRFFIRRAGRWVATPLFLVLLLVETTDLIFAVDSIPAIFAVTTDPF
IVYTSNVFAILGLRSLYFVLAGVVGKFHYLKLALSVILTFVGTKMLLIDIFKIPIAVSLLVIVSVLAVAVVASIMRARLL
DKERERQERELALDRRE

Sequences:

>Translated_337_residues
MGSACQIRYLRSLLEVNMDSLWIWVGFNAFVLGMLALDLGVFHRKSHAVSFKEALTWSGVWIALAMVFNVGLYFWMGPEP
ALEFFTGYLIEKSLSVDNIFVFVLIFSAFSVPAIYQHRVLFWGVLGALVMRGILIFAGAALLKEFHWIIYIFGAFLVFTG
IKMAFPEKEEKDITQNPVLKLVRRLIPVSDNYVEDRFFIRRAGRWVATPLFLVLLLVETTDLIFAVDSIPAIFAVTTDPF
IVYTSNVFAILGLRSLYFVLAGVVGKFHYLKLALSVILTFVGTKMLLIDIFKIPIAVSLLVIVSVLAVAVVASIMRARLL
DKERERQERELALDRRE
>Mature_336_residues
GSACQIRYLRSLLEVNMDSLWIWVGFNAFVLGMLALDLGVFHRKSHAVSFKEALTWSGVWIALAMVFNVGLYFWMGPEPA
LEFFTGYLIEKSLSVDNIFVFVLIFSAFSVPAIYQHRVLFWGVLGALVMRGILIFAGAALLKEFHWIIYIFGAFLVFTGI
KMAFPEKEEKDITQNPVLKLVRRLIPVSDNYVEDRFFIRRAGRWVATPLFLVLLLVETTDLIFAVDSIPAIFAVTTDPFI
VYTSNVFAILGLRSLYFVLAGVVGKFHYLKLALSVILTFVGTKMLLIDIFKIPIAVSLLVIVSVLAVAVVASIMRARLLD
KERERQERELALDRRE

Specific function: Unknown

COG id: COG0861

COG function: function code P; Membrane protein TerC, possibly involved in tellurium resistance

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the terC family [H]

Homologues:

Organism=Escherichia coli, GI48994922, Length=311, Percent_Identity=50.8038585209003, Blast_Score=299, Evalue=2e-82,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005496
- InterPro:   IPR022369 [H]

Pfam domain/function: PF03741 TerC [H]

EC number: NA

Molecular weight: Translated: 38188; Mature: 38057

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSACQIRYLRSLLEVNMDSLWIWVGFNAFVLGMLALDLGVFHRKSHAVSFKEALTWSGV
CCCCHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WIALAMVFNVGLYFWMGPEPALEFFTGYLIEKSLSVDNIFVFVLIFSAFSVPAIYQHRVL
HHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHH
FWGVLGALVMRGILIFAGAALLKEFHWIIYIFGAFLVFTGIKMAFPEKEEKDITQNPVLK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCHHHH
LVRRLIPVSDNYVEDRFFIRRAGRWVATPLFLVLLLVETTDLIFAVDSIPAIFAVTTDPF
HHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHEECCCCCEEEEEECCCE
IVYTSNVFAILGLRSLYFVLAGVVGKFHYLKLALSVILTFVGTKMLLIDIFKIPIAVSLL
EEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VIVSVLAVAVVASIMRARLLDKERERQERELALDRRE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
GSACQIRYLRSLLEVNMDSLWIWVGFNAFVLGMLALDLGVFHRKSHAVSFKEALTWSGV
CCCHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WIALAMVFNVGLYFWMGPEPALEFFTGYLIEKSLSVDNIFVFVLIFSAFSVPAIYQHRVL
HHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHH
FWGVLGALVMRGILIFAGAALLKEFHWIIYIFGAFLVFTGIKMAFPEKEEKDITQNPVLK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCHHHH
LVRRLIPVSDNYVEDRFFIRRAGRWVATPLFLVLLLVETTDLIFAVDSIPAIFAVTTDPF
HHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHEECCCCCEEEEEECCCE
IVYTSNVFAILGLRSLYFVLAGVVGKFHYLKLALSVILTFVGTKMLLIDIFKIPIAVSLL
EEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VIVSVLAVAVVASIMRARLLDKERERQERELALDRRE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA