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The map label for this gene is nisX1 [H]

Identifier: 37523904

GI number: 37523904

Start: 4569592

End: 4570497

Strand: Direct

Name: nisX1 [H]

Synonym: glr4335

Alternate gene names: 37523904

Gene position: 4569592-4570497 (Clockwise)

Preceding gene: 37523903

Following gene: 37523905

Centisome position: 98.08

GC content: 58.17

Gene sequence:

>906_bases
GTGCTTTCTGTGCTGCGTTCAGAGCGGTTTGTGGACCAGAGCCCCCGGCAGATCTACGCCACGCTGCTCGACGAGGGCAC
TTATCTATGTTCCTATCGCACTATGTATCGCCTATTAGCTGAAGCGGGCGAGGTGCGCGAACGGCGCCACCAACGTCGCC
AGCCGCTCTACAGCAAGCCCGAGTTACTGGCGACGGCTCCCAATCAACTGTGGAGTTGGGATATCACCAAGCTCAAAGGA
CCACAAAAAGCTCAGCATTATCATCTGTATGTGTTGCTGGATGTCTACAGTCGCTGCGTGGTCGGCTGGCTGGTGGCAGC
GCAGGAATCGGCAGAGCTTGCTGAACAGTTGATTGCCCAAAGCTCTACCAGGGAAGGAATAGCCCGTGACCAGCTGACGA
TTCACTCCGAGCGAGGAGCGGCGATGACCAGTCGCACTGTGGCGGTGTTGTTGTCGGACCTGGGTATTACCAAAAGCCAT
TCGCGTCCGCACGTCAGCAACGACAACCCCTACAGTGAATCCCAGTTCAAGACCATGAAGTACCAGGGTCGTTGCCCCAA
CGACCCCCAGCCGCAATTTCCTGAGCGCTTCGGTTCGCTGGAAGATGCCCGTGCTTTTTGTCAGCGCTTTTTCGCCTGGT
ACAACCATGAGCATTGCCATTCGGGGATCGGGCTGATGCCACCTGCGAGCCTGCACACGGGCGAAGCGCACCAACGACAA
GAACGACGACGGCAGGTGTTGGCGGCGGCCTATACCCAGCATCCAGACCGCTTCGTCCGCAAGATCCCCGAGCCGCCGGC
CCTGCCCGAGGCGGTGTGGATCAACAAGCCCAAAGATAGCAGTACAGCTTCCTCAGCGGAAACTCAGCCGAGCTGCTCTG
TGCCAGATTCAGAAAGTCGTCTCTAA

Upstream 100 bases:

>100_bases
CGCCTCGGTCTACCGTTTCGCCAAGCCTGCCGATAAGCCAAAGCCGAAAAAGCCCCACCCAGCTCCCCCACGGTCTTTGC
AGGCACAGGAGAAACAACAG

Downstream 100 bases:

>100_bases
CCTATTGACACATTCCGAAGTCAGCCAGAAGGGCCTCTATCGATGGAGCCCTCAGGTTCTACGGGCCAACCTGCGCGGAC
ACTTTACTCGTCTTGCCCTC

Product: putative transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 301; Mature: 301

Protein sequence:

>301_residues
MLSVLRSERFVDQSPRQIYATLLDEGTYLCSYRTMYRLLAEAGEVRERRHQRRQPLYSKPELLATAPNQLWSWDITKLKG
PQKAQHYHLYVLLDVYSRCVVGWLVAAQESAELAEQLIAQSSTREGIARDQLTIHSERGAAMTSRTVAVLLSDLGITKSH
SRPHVSNDNPYSESQFKTMKYQGRCPNDPQPQFPERFGSLEDARAFCQRFFAWYNHEHCHSGIGLMPPASLHTGEAHQRQ
ERRRQVLAAAYTQHPDRFVRKIPEPPALPEAVWINKPKDSSTASSAETQPSCSVPDSESRL

Sequences:

>Translated_301_residues
MLSVLRSERFVDQSPRQIYATLLDEGTYLCSYRTMYRLLAEAGEVRERRHQRRQPLYSKPELLATAPNQLWSWDITKLKG
PQKAQHYHLYVLLDVYSRCVVGWLVAAQESAELAEQLIAQSSTREGIARDQLTIHSERGAAMTSRTVAVLLSDLGITKSH
SRPHVSNDNPYSESQFKTMKYQGRCPNDPQPQFPERFGSLEDARAFCQRFFAWYNHEHCHSGIGLMPPASLHTGEAHQRQ
ERRRQVLAAAYTQHPDRFVRKIPEPPALPEAVWINKPKDSSTASSAETQPSCSVPDSESRL
>Mature_301_residues
MLSVLRSERFVDQSPRQIYATLLDEGTYLCSYRTMYRLLAEAGEVRERRHQRRQPLYSKPELLATAPNQLWSWDITKLKG
PQKAQHYHLYVLLDVYSRCVVGWLVAAQESAELAEQLIAQSSTREGIARDQLTIHSERGAAMTSRTVAVLLSDLGITKSH
SRPHVSNDNPYSESQFKTMKYQGRCPNDPQPQFPERFGSLEDARAFCQRFFAWYNHEHCHSGIGLMPPASLHTGEAHQRQ
ERRRQVLAAAYTQHPDRFVRKIPEPPALPEAVWINKPKDSSTASSAETQPSCSVPDSESRL

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 34331; Mature: 34331

Theoretical pI: Translated: 8.56; Mature: 8.56

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSVLRSERFVDQSPRQIYATLLDEGTYLCSYRTMYRLLAEAGEVRERRHQRRQPLYSKP
CCCHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
ELLATAPNQLWSWDITKLKGPQKAQHYHLYVLLDVYSRCVVGWLVAAQESAELAEQLIAQ
CCEEECCCHHHCCCHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SSTREGIARDQLTIHSERGAAMTSRTVAVLLSDLGITKSHSRPHVSNDNPYSESQFKTMK
HHHHCCHHHHHEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHH
YQGRCPNDPQPQFPERFGSLEDARAFCQRFFAWYNHEHCHSGIGLMPPASLHTGEAHQRQ
CCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHCHHHHHCCCCCCCCCCCCCCHHHHHH
ERRRQVLAAAYTQHPDRFVRKIPEPPALPEAVWINKPKDSSTASSAETQPSCSVPDSESR
HHHHHHHHHHHHCCHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
L
C
>Mature Secondary Structure
MLSVLRSERFVDQSPRQIYATLLDEGTYLCSYRTMYRLLAEAGEVRERRHQRRQPLYSKP
CCCHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
ELLATAPNQLWSWDITKLKGPQKAQHYHLYVLLDVYSRCVVGWLVAAQESAELAEQLIAQ
CCEEECCCHHHCCCHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SSTREGIARDQLTIHSERGAAMTSRTVAVLLSDLGITKSHSRPHVSNDNPYSESQFKTMK
HHHHCCHHHHHEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHH
YQGRCPNDPQPQFPERFGSLEDARAFCQRFFAWYNHEHCHSGIGLMPPASLHTGEAHQRQ
CCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHCHHHHHCCCCCCCCCCCCCCHHHHHH
ERRRQVLAAAYTQHPDRFVRKIPEPPALPEAVWINKPKDSSTASSAETQPSCSVPDSESR
HHHHHHHHHHHHCCHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
L
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1482189; 11337471; 1482192 [H]