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The map label for this gene is ywdK [H]

Identifier: 37523900

GI number: 37523900

Start: 4566921

End: 4567298

Strand: Direct

Name: ywdK [H]

Synonym: glr4331

Alternate gene names: 37523900

Gene position: 4566921-4567298 (Clockwise)

Preceding gene: 37523899

Following gene: 37523901

Centisome position: 98.02

GC content: 64.29

Gene sequence:

>378_bases
ATGTTTCGCCTCTTTTTGACCACCGCCGCCGTGCTTGCGGGTCTGGCGGTCGCCCTCGGAGCCTTTGGCACCCACGCCCT
GCGCGATCGGCTCGATGCGCGGGCCATCGAAATTTTCGAGACCGCCGCGCGTTACCAGATCCTCCACGCCCTGGCGCTGG
CGTTGGTGGCGGTGCTGGTGAACCGCTTCGACCCACCCCCGGCGCTGTTGGTCGCAAGCGGTGCGGCTTTCATTGCCGGG
ATCTTGATATTCTCCGGCAGCTTGTATGCTTTGAGCTGGAGCGGCATCCGCGTTTTGGGGGCGGTCACCCCCTTCGGCGG
CGGCGCGTTGATCGTAGGCTGGATCTGCCTGGCCCTATTCAGCGCCAACTTAAAGTGA

Upstream 100 bases:

>100_bases
GCTTTTGCCCTCGAAGCGCTGCCCGAAGGGTTGACCGGCGATTGCCGCGAGCAAATCGAACATTATCTGGCCGGTGCCGT
CGTGGTGGATTGAATTGCCG

Downstream 100 bases:

>100_bases
CCGTGCGCTGCTGACCACCCGACACCGGAACCTACCCACTATGTGCCGCCTACTTGCCTACCAGGGAGCACCCGTCGCCC
TCGCCGATCTGATCGAAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 125; Mature: 125

Protein sequence:

>125_residues
MFRLFLTTAAVLAGLAVALGAFGTHALRDRLDARAIEIFETAARYQILHALALALVAVLVNRFDPPPALLVASGAAFIAG
ILIFSGSLYALSWSGIRVLGAVTPFGGGALIVGWICLALFSANLK

Sequences:

>Translated_125_residues
MFRLFLTTAAVLAGLAVALGAFGTHALRDRLDARAIEIFETAARYQILHALALALVAVLVNRFDPPPALLVASGAAFIAG
ILIFSGSLYALSWSGIRVLGAVTPFGGGALIVGWICLALFSANLK
>Mature_125_residues
MFRLFLTTAAVLAGLAVALGAFGTHALRDRLDARAIEIFETAARYQILHALALALVAVLVNRFDPPPALLVASGAAFIAG
ILIFSGSLYALSWSGIRVLGAVTPFGGGALIVGWICLALFSANLK

Specific function: Unknown

COG id: COG2363

COG function: function code S; Uncharacterized small membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0382 family [H]

Homologues:

Organism=Escherichia coli, GI1789172, Length=124, Percent_Identity=35.4838709677419, Blast_Score=61, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI193203406, Length=114, Percent_Identity=42.1052631578947, Blast_Score=72, Evalue=6e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006696 [H]

Pfam domain/function: PF04241 DUF423 [H]

EC number: NA

Molecular weight: Translated: 13010; Mature: 13010

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRLFLTTAAVLAGLAVALGAFGTHALRDRLDARAIEIFETAARYQILHALALALVAVLV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NRFDPPPALLVASGAAFIAGILIFSGSLYALSWSGIRVLGAVTPFGGGALIVGWICLALF
HCCCCCCHHHHCCHHHHHHHHHHHCCCCEEEECCCEEEEEECCCCCCHHHHHHHHHHHHH
SANLK
HCCCC
>Mature Secondary Structure
MFRLFLTTAAVLAGLAVALGAFGTHALRDRLDARAIEIFETAARYQILHALALALVAVLV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NRFDPPPALLVASGAAFIAGILIFSGSLYALSWSGIRVLGAVTPFGGGALIVGWICLALF
HCCCCCCHHHHCCHHHHHHHHHHHCCCCEEEECCCEEEEEECCCCCCHHHHHHHHHHHHH
SANLK
HCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377 [H]