| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
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The map label for this gene is dnaJ
Identifier: 37523836
GI number: 37523836
Start: 4488175
End: 4489326
Strand: Direct
Name: dnaJ
Synonym: gvip555
Alternate gene names: 37523836
Gene position: 4488175-4489326 (Clockwise)
Preceding gene: 37523835
Following gene: 37523837
Centisome position: 96.33
GC content: 65.8
Gene sequence:
>1152_bases ATGGCCAGAGATTTATACGAAACCCTCAACGTCAGCCGCGACGCCTCCAAAGAGGACATCAAGCGGGCCTACCGCAAGCT GGCCCGCCAGTACCACCCGGATGTCAACAAAGACGCCGGGGCAGAGGACACGTTCAAAGAGCTCTCGCGCGCCTACGAAG TGCTCTCCGACGACGATCAGCGGGCGCGCTACGACCGCTTCGGAGAGGCCGGTCTCAACGGCGGCGTGGGCGGCGGCCCG GGGGATTTTGCAGGGGCGGCGGGCTTCGGCGACATCAGCGATATTTTCGAGAGTTTCTTTGGCGGCTTCGCCGGGGCGGG TACCGGCGGCCGGCGCGCCACCCGGCCGGGCGGACCCACCCGCGGCGACGATCTGCGCTACGACATGGTGCTCGAATTTC AGGAGGCCATCTTCGGCGGCGAAAAAGAGATCACCATCAACCACCTGATCACCTGCGAGACCTGCCGCGGCTCCGGCTCC AAACCCGGCTCCGGTCCTATGACTTGCCGCAACTGCGGCGGCCAGGGCCAGATCCGCCAGGCGCGGCGGACCCCCTTTGG GCTGTTTACCCAGGTGGCGGCCTGCCCCAACTGCCAGGGCACCGGCGAGGTGATCGAAAGCCCCTGCCCAACCTGCAGCG GGCGCGGGCGCAACCAGAAGCAGACCACCATCAAGATCACCATCCCCGCCGGGGTGGACGCCGGATCGCGCCTGCGGGTG CAGGGCGAGGGCGACGCCGGGATGCGCGGTGGCCCGCCGGGGGACCTGTTCATCTACGTGAGCGTGCGCAACCACCCGGT CTTCCGTCGCGAAGGGCAAGACATCTATTCGATCGCCGAAATTTCTTATCTGCAAGCGATTTTGGGCTCGCAGATGTCGG TGGAGACCGTCGACGGTCCGCAGACGGTGGTGGTGCCCCCCGGTACGCAGCCCGAGACGGTACTCACCCTCGACGGCAAA GGCGTGCCGCGCATCGGCAATCCCACCCGCCGCGGCAACCACTACCTGCAGCTCAAGGTGGTCATTCCCACCAAACTGGG CGCCGAGGAGCGCGAACTGCTCACCAAGCTCGCCAAGGCCCGCGGCGAAAAAGTCTCCAAAAAAGAGGGGCTCGAAGGCC TGATCGACAGCATCGGCAACCTATTTCACTAA
Upstream 100 bases:
>100_bases GTTGGTGTGGCTGTCCTGGGCAGGCTTGCGGGTCCTCCGGGCGGTAGAGATACTAGACTATGTAAGGATTTCCTAAGCAA CCGGGGTCCGCCCAACCAGC
Downstream 100 bases:
>100_bases GGCGCACCGATGGGTACCACCGGCACGGTCCTGGCCCAGGAAGCCAACTTCTACCGTGTCCGGCTCGACGACGGTCTGGG GATGGTGCTGTGCACCCGCC
Product: chaperone protein DnaJ
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 383; Mature: 382
Protein sequence:
>383_residues MARDLYETLNVSRDASKEDIKRAYRKLARQYHPDVNKDAGAEDTFKELSRAYEVLSDDDQRARYDRFGEAGLNGGVGGGP GDFAGAAGFGDISDIFESFFGGFAGAGTGGRRATRPGGPTRGDDLRYDMVLEFQEAIFGGEKEITINHLITCETCRGSGS KPGSGPMTCRNCGGQGQIRQARRTPFGLFTQVAACPNCQGTGEVIESPCPTCSGRGRNQKQTTIKITIPAGVDAGSRLRV QGEGDAGMRGGPPGDLFIYVSVRNHPVFRREGQDIYSIAEISYLQAILGSQMSVETVDGPQTVVVPPGTQPETVLTLDGK GVPRIGNPTRRGNHYLQLKVVIPTKLGAEERELLTKLAKARGEKVSKKEGLEGLIDSIGNLFH
Sequences:
>Translated_383_residues MARDLYETLNVSRDASKEDIKRAYRKLARQYHPDVNKDAGAEDTFKELSRAYEVLSDDDQRARYDRFGEAGLNGGVGGGP GDFAGAAGFGDISDIFESFFGGFAGAGTGGRRATRPGGPTRGDDLRYDMVLEFQEAIFGGEKEITINHLITCETCRGSGS KPGSGPMTCRNCGGQGQIRQARRTPFGLFTQVAACPNCQGTGEVIESPCPTCSGRGRNQKQTTIKITIPAGVDAGSRLRV QGEGDAGMRGGPPGDLFIYVSVRNHPVFRREGQDIYSIAEISYLQAILGSQMSVETVDGPQTVVVPPGTQPETVLTLDGK GVPRIGNPTRRGNHYLQLKVVIPTKLGAEERELLTKLAKARGEKVSKKEGLEGLIDSIGNLFH >Mature_382_residues ARDLYETLNVSRDASKEDIKRAYRKLARQYHPDVNKDAGAEDTFKELSRAYEVLSDDDQRARYDRFGEAGLNGGVGGGPG DFAGAAGFGDISDIFESFFGGFAGAGTGGRRATRPGGPTRGDDLRYDMVLEFQEAIFGGEKEITINHLITCETCRGSGSK PGSGPMTCRNCGGQGQIRQARRTPFGLFTQVAACPNCQGTGEVIESPCPTCSGRGRNQKQTTIKITIPAGVDAGSRLRVQ GEGDAGMRGGPPGDLFIYVSVRNHPVFRREGQDIYSIAEISYLQAILGSQMSVETVDGPQTVVVPPGTQPETVLTLDGKG VPRIGNPTRRGNHYLQLKVVIPTKLGAEERELLTKLAKARGEKVSKKEGLEGLIDSIGNLFH
Specific function: Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion. Unfolded proteins bind initially to dnaJ; upon
COG id: COG0484
COG function: function code O; DnaJ-class molecular chaperone with C-terminal Zn finger domain
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 J domain
Homologues:
Organism=Homo sapiens, GI205360838, Length=357, Percent_Identity=35.8543417366947, Blast_Score=224, Evalue=1e-58, Organism=Homo sapiens, GI205360840, Length=357, Percent_Identity=35.8543417366947, Blast_Score=224, Evalue=1e-58, Organism=Homo sapiens, GI5031741, Length=345, Percent_Identity=33.6231884057971, Blast_Score=171, Evalue=1e-42, Organism=Homo sapiens, GI4504511, Length=368, Percent_Identity=32.6086956521739, Blast_Score=166, Evalue=4e-41, Organism=Homo sapiens, GI194328760, Length=346, Percent_Identity=31.5028901734104, Blast_Score=152, Evalue=5e-37, Organism=Homo sapiens, GI194328758, Length=346, Percent_Identity=31.5028901734104, Blast_Score=152, Evalue=7e-37, Organism=Homo sapiens, GI7706495, Length=360, Percent_Identity=32.5, Blast_Score=139, Evalue=5e-33, Organism=Homo sapiens, GI6631085, Length=375, Percent_Identity=29.3333333333333, Blast_Score=127, Evalue=2e-29, Organism=Homo sapiens, GI194328762, Length=307, Percent_Identity=28.6644951140065, Blast_Score=115, Evalue=7e-26, Organism=Homo sapiens, GI47777312, Length=104, Percent_Identity=50.9615384615385, Blast_Score=94, Evalue=2e-19, Organism=Homo sapiens, GI56687498, Length=70, Percent_Identity=58.5714285714286, Blast_Score=93, Evalue=3e-19, Organism=Homo sapiens, GI5453690, Length=309, Percent_Identity=28.4789644012945, Blast_Score=90, Evalue=3e-18, Organism=Homo sapiens, GI194306642, Length=104, Percent_Identity=49.0384615384615, Blast_Score=88, Evalue=1e-17, Organism=Homo sapiens, GI194306640, Length=104, Percent_Identity=49.0384615384615, Blast_Score=88, Evalue=1e-17, Organism=Homo sapiens, GI201862518, Length=125, Percent_Identity=42.4, Blast_Score=86, Evalue=4e-17, Organism=Homo sapiens, GI201862587, Length=125, Percent_Identity=42.4, Blast_Score=86, Evalue=5e-17, Organism=Homo sapiens, GI56549115, Length=125, Percent_Identity=42.4, Blast_Score=86, Evalue=5e-17, Organism=Homo sapiens, GI27151736, Length=105, Percent_Identity=46.6666666666667, Blast_Score=86, Evalue=6e-17, Organism=Homo sapiens, GI88501736, Length=105, Percent_Identity=46.6666666666667, Blast_Score=85, Evalue=1e-16, Organism=Homo sapiens, GI9558755, Length=203, Percent_Identity=31.5270935960591, Blast_Score=84, Evalue=2e-16, Organism=Homo sapiens, GI39204547, Length=181, Percent_Identity=30.3867403314917, Blast_Score=81, Evalue=2e-15, Organism=Homo sapiens, GI21553335, Length=99, Percent_Identity=44.4444444444444, Blast_Score=80, Evalue=3e-15, Organism=Homo sapiens, GI22749377, Length=109, Percent_Identity=42.2018348623853, Blast_Score=80, Evalue=3e-15, Organism=Homo sapiens, GI23503241, Length=104, Percent_Identity=48.0769230769231, Blast_Score=80, Evalue=4e-15, Organism=Homo sapiens, GI72534740, Length=102, Percent_Identity=42.156862745098, Blast_Score=78, Evalue=2e-14, Organism=Homo sapiens, GI68077168, Length=79, Percent_Identity=53.1645569620253, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI68077166, Length=79, Percent_Identity=53.1645569620253, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI17388799, Length=104, Percent_Identity=50.9615384615385, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI4885495, Length=104, Percent_Identity=50.9615384615385, Blast_Score=73, Evalue=4e-13, Organism=Homo sapiens, GI24308127, Length=77, Percent_Identity=45.4545454545455, Blast_Score=73, Evalue=4e-13, Organism=Homo sapiens, GI21361912, Length=69, Percent_Identity=50.7246376811594, Blast_Score=72, Evalue=7e-13, Organism=Homo sapiens, GI217035105, Length=73, Percent_Identity=49.3150684931507, Blast_Score=70, Evalue=3e-12, Organism=Homo sapiens, GI45504382, Length=69, Percent_Identity=46.3768115942029, Blast_Score=69, Evalue=9e-12, Organism=Homo sapiens, GI29126218, Length=69, Percent_Identity=46.3768115942029, Blast_Score=68, Evalue=1e-11, Organism=Escherichia coli, GI1786197, Length=361, Percent_Identity=42.6592797783933, Blast_Score=269, Evalue=2e-73, Organism=Escherichia coli, GI1787235, Length=364, Percent_Identity=29.6703296703297, Blast_Score=144, Evalue=9e-36, Organism=Caenorhabditis elegans, GI17553098, Length=371, Percent_Identity=34.5013477088949, Blast_Score=184, Evalue=5e-47, Organism=Caenorhabditis elegans, GI17553096, Length=371, Percent_Identity=34.2318059299191, Blast_Score=184, Evalue=6e-47, Organism=Caenorhabditis elegans, GI17534355, Length=360, Percent_Identity=30, Blast_Score=145, Evalue=2e-35, Organism=Caenorhabditis elegans, GI17507263, Length=370, Percent_Identity=31.6216216216216, Blast_Score=127, Evalue=9e-30, Organism=Caenorhabditis elegans, GI212645553, Length=372, Percent_Identity=28.494623655914, Blast_Score=124, Evalue=1e-28, Organism=Caenorhabditis elegans, GI17563890, Length=198, Percent_Identity=25.7575757575758, Blast_Score=89, Evalue=4e-18, Organism=Caenorhabditis elegans, GI115532378, Length=98, Percent_Identity=41.8367346938776, Blast_Score=80, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17538236, Length=112, Percent_Identity=41.0714285714286, Blast_Score=75, Evalue=5e-14, Organism=Caenorhabditis elegans, GI115532476, Length=65, Percent_Identity=53.8461538461538, Blast_Score=73, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17554644, Length=63, Percent_Identity=53.968253968254, Blast_Score=69, Evalue=6e-12, Organism=Caenorhabditis elegans, GI17568643, Length=70, Percent_Identity=48.5714285714286, Blast_Score=67, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6324265, Length=354, Percent_Identity=34.7457627118644, Blast_Score=167, Evalue=2e-42, Organism=Saccharomyces cerevisiae, GI6323119, Length=387, Percent_Identity=28.4237726098191, Blast_Score=143, Evalue=4e-35, Organism=Saccharomyces cerevisiae, GI6321094, Length=402, Percent_Identity=31.592039800995, Blast_Score=138, Evalue=2e-33, Organism=Saccharomyces cerevisiae, GI6323870, Length=373, Percent_Identity=32.7077747989276, Blast_Score=132, Evalue=6e-32, Organism=Saccharomyces cerevisiae, GI6324252, Length=414, Percent_Identity=24.6376811594203, Blast_Score=112, Evalue=7e-26, Organism=Saccharomyces cerevisiae, GI6323813, Length=113, Percent_Identity=39.8230088495575, Blast_Score=74, Evalue=4e-14, Organism=Saccharomyces cerevisiae, GI6324321, Length=138, Percent_Identity=30.4347826086957, Blast_Score=73, Evalue=8e-14, Organism=Saccharomyces cerevisiae, GI6322194, Length=110, Percent_Identity=41.8181818181818, Blast_Score=68, Evalue=2e-12, Organism=Drosophila melanogaster, GI45549272, Length=399, Percent_Identity=31.8295739348371, Blast_Score=178, Evalue=6e-45, Organism=Drosophila melanogaster, GI45552813, Length=399, Percent_Identity=31.8295739348371, Blast_Score=178, Evalue=6e-45, Organism=Drosophila melanogaster, GI45552811, Length=399, Percent_Identity=31.8295739348371, Blast_Score=177, Evalue=1e-44, Organism=Drosophila melanogaster, GI20129487, Length=347, Percent_Identity=33.4293948126801, Blast_Score=164, Evalue=1e-40, Organism=Drosophila melanogaster, GI24584014, Length=347, Percent_Identity=33.4293948126801, Blast_Score=164, Evalue=1e-40, Organism=Drosophila melanogaster, GI24646562, Length=347, Percent_Identity=30.5475504322767, Blast_Score=151, Evalue=6e-37, Organism=Drosophila melanogaster, GI24646560, Length=347, Percent_Identity=30.5475504322767, Blast_Score=151, Evalue=6e-37, Organism=Drosophila melanogaster, GI24646558, Length=347, Percent_Identity=30.5475504322767, Blast_Score=151, Evalue=6e-37, Organism=Drosophila melanogaster, GI24646556, Length=347, Percent_Identity=30.5475504322767, Blast_Score=151, Evalue=6e-37, Organism=Drosophila melanogaster, GI21357547, Length=347, Percent_Identity=30.5475504322767, Blast_Score=151, Evalue=6e-37, Organism=Drosophila melanogaster, GI28574949, Length=365, Percent_Identity=29.3150684931507, Blast_Score=142, Evalue=3e-34, Organism=Drosophila melanogaster, GI85726398, Length=365, Percent_Identity=30.1369863013699, Blast_Score=139, Evalue=3e-33, Organism=Drosophila melanogaster, GI19920464, Length=360, Percent_Identity=30.5555555555556, Blast_Score=131, Evalue=8e-31, Organism=Drosophila melanogaster, GI24658562, Length=369, Percent_Identity=28.7262872628726, Blast_Score=128, Evalue=5e-30, Organism=Drosophila melanogaster, GI24658555, Length=369, Percent_Identity=28.7262872628726, Blast_Score=128, Evalue=5e-30, Organism=Drosophila melanogaster, GI18858081, Length=374, Percent_Identity=25.9358288770053, Blast_Score=99, Evalue=4e-21, Organism=Drosophila melanogaster, GI24668492, Length=73, Percent_Identity=46.5753424657534, Blast_Score=75, Evalue=6e-14, Organism=Drosophila melanogaster, GI24654066, Length=71, Percent_Identity=52.112676056338, Blast_Score=75, Evalue=8e-14, Organism=Drosophila melanogaster, GI24654070, Length=71, Percent_Identity=52.112676056338, Blast_Score=75, Evalue=8e-14, Organism=Drosophila melanogaster, GI24654068, Length=71, Percent_Identity=52.112676056338, Blast_Score=75, Evalue=8e-14, Organism=Drosophila melanogaster, GI24654072, Length=71, Percent_Identity=52.112676056338, Blast_Score=75, Evalue=8e-14, Organism=Drosophila melanogaster, GI17737735, Length=69, Percent_Identity=50.7246376811594, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI28574723, Length=69, Percent_Identity=50.7246376811594, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI24668523, Length=69, Percent_Identity=50.7246376811594, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI19922238, Length=73, Percent_Identity=50.6849315068493, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI161077138, Length=64, Percent_Identity=53.125, Blast_Score=67, Evalue=3e-11, Organism=Drosophila melanogaster, GI21358273, Length=66, Percent_Identity=50, Blast_Score=65, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): DNAJ_GLOVI (Q7NDG8)
Other databases:
- EMBL: BA000045 - RefSeq: NP_927213.1 - ProteinModelPortal: Q7NDG8 - GeneID: 2602670 - GenomeReviews: BA000045_GR - NMPDR: fig|251221.1.peg.4267 - HOGENOM: HBG635315 - OMA: IHITIET - ProtClustDB: PRK14293 - BioCyc: GVIO251221:GLR4267-MONOMER - GO: GO:0005737 - HAMAP: MF_01152 - InterPro: IPR012724 - InterPro: IPR002939 - InterPro: IPR001623 - InterPro: IPR018253 - InterPro: IPR008971 - InterPro: IPR015609 - InterPro: IPR003095 - InterPro: IPR001305 - Gene3D: G3DSA:1.10.287.110 - Gene3D: G3DSA:2.10.230.10 - PANTHER: PTHR11821 - PRINTS: PR00625 - SMART: SM00271 - TIGRFAMs: TIGR02349
Pfam domain/function: PF00226 DnaJ; PF01556 DnaJ_C; PF00684 DnaJ_CXXCXGXG; SSF46565 DnaJ_N; SSF49493 HSP40_DnaJ_pep; SSF57938 HSP_DnaJ_cys-rich
EC number: NA
Molecular weight: Translated: 41131; Mature: 41000
Theoretical pI: Translated: 7.72; Mature: 7.72
Prosite motif: PS00636 DNAJ_1; PS50076 DNAJ_2; PS51188 ZF_CR; PS00637 DNAJ_CXXCXGXG
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARDLYETLNVSRDASKEDIKRAYRKLARQYHPDVNKDAGAEDTFKELSRAYEVLSDDDQ CCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCHH RARYDRFGEAGLNGGVGGGPGDFAGAAGFGDISDIFESFFGGFAGAGTGGRRATRPGGPT HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCC RGDDLRYDMVLEFQEAIFGGEKEITINHLITCETCRGSGSKPGSGPMTCRNCGGQGQIRQ CCCCCCHHHHHHHHHHHHCCCCEEEEEEEEEEEECCCCCCCCCCCCCHHHCCCCCCHHHH ARRTPFGLFTQVAACPNCQGTGEVIESPCPTCSGRGRNQKQTTIKITIPAGVDAGSRLRV HHCCCHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEE QGEGDAGMRGGPPGDLFIYVSVRNHPVFRREGQDIYSIAEISYLQAILGSQMSVETVDGP ECCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCC QTVVVPPGTQPETVLTLDGKGVPRIGNPTRRGNHYLQLKVVIPTKLGAEERELLTKLAKA EEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHH RGEKVSKKEGLEGLIDSIGNLFH HCCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure ARDLYETLNVSRDASKEDIKRAYRKLARQYHPDVNKDAGAEDTFKELSRAYEVLSDDDQ CHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCHH RARYDRFGEAGLNGGVGGGPGDFAGAAGFGDISDIFESFFGGFAGAGTGGRRATRPGGPT HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCC RGDDLRYDMVLEFQEAIFGGEKEITINHLITCETCRGSGSKPGSGPMTCRNCGGQGQIRQ CCCCCCHHHHHHHHHHHHCCCCEEEEEEEEEEEECCCCCCCCCCCCCHHHCCCCCCHHHH ARRTPFGLFTQVAACPNCQGTGEVIESPCPTCSGRGRNQKQTTIKITIPAGVDAGSRLRV HHCCCHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEE QGEGDAGMRGGPPGDLFIYVSVRNHPVFRREGQDIYSIAEISYLQAILGSQMSVETVDGP ECCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCC QTVVVPPGTQPETVLTLDGKGVPRIGNPTRRGNHYLQLKVVIPTKLGAEERELLTKLAKA EEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHH RGEKVSKKEGLEGLIDSIGNLFH HCCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 14621292