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The map label for this gene is yicJ [C]

Identifier: 37523819

GI number: 37523819

Start: 4470096

End: 4471454

Strand: Reverse

Name: yicJ [C]

Synonym: gll4250

Alternate gene names: 37523819

Gene position: 4471454-4470096 (Counterclockwise)

Preceding gene: 37523820

Following gene: 37523818

Centisome position: 95.97

GC content: 64.83

Gene sequence:

>1359_bases
GTGCCCCCTAAGCCCGAACGCCTGAATCTGGCCCAGAAGCTCGCCTACGGGGCGGGGGACTTTGGTCCTGCCGTCACCGC
CAATTTACTGGTCTTCTTCTGGCTGCCGTTTTTGACCGACGCCGCGGGCCTTGCCGCCGGTGCGGCGGGCAGCATTCTGG
CCATCAGCAAAATCTGGGATGCGATCAACGACCCGATCGTGGGCGTGCTCACCGACCGCACGCGCAGCCGCTGGGGCAGG
CGCCGCCCCTGGATTTTGCTGGGGGCCATTCCCTTTGGCTTCACCTTCTTTGCCCAGTGGCTGGTGCCCTTCGCGGGCAA
CGCGGGGGCCGCCTTCTGGTACTACCTGGCGATGGCGCTGCTGTTCAACAGCCTCTACACCGCCGTCAATTTGCCTTACA
CCGCCCTCACACCGGAGTTGACCGACGATTACGACGAGCGCACCGGTTTGTCGAAATTTCGCTTTGCTTTTTCAATCGGC
GGCAGCCTGCTGTCGGGGGTGACCTTCCCGCTCATCCTCGCGGCCTTTCCCACCCGCCCCGCCTTCGGCAACGCTCTGGG
GGCCGGGATCTGGGCGGTGCTCGCGGTGTTGCCGCTATTTTGGTGTTTCTTCGGAACGCGCGAGCGCTTCGCGACTCCTG
CCAGCGAGCGCCTCCCGCTTGCCCGGCAATTGCGCATCGCCTTGGCCAACCGGCCCTATCTGGATGTAGTGGGAATTTAT
CTGTGTTCGTGGTTTGCGGTGCAACTGATCGCCACGGTGGTTCCCTACTACGTCCGCTACTGGATGAACCTGCCGGACAG
CTGGTTGGCCGCAACGATCTTCGCCATCCAGGGCACGGCTCTAGCGATGCTGTTCGTCTGGAGCGCCCTCAGCGCCCGCC
TGGGCAAGAAGCGGGTCTTTTATCTGGGGACAGGGTTTTTCTTGCTGGCGATGCTCGGCTTGATGTTGCTCAGCCCCGGC
CAGGCGGTCTGGATGCTGGTTCTGGCGGTGGTGGCCGGGGTCGGCGTCTCGACGGTCTATTTGATTCCCTGGTCGATGCT
GCCGGATGTGATCGACCTGGATGAACTGCAGACCGGCGAGCGCCGCGAGGGCGTCTTCTACGCGCTGTTGGTGCTGCTGC
AGAAAGTCTGTCTGGCCGCCAGCCTGCTGCTGGTGGGGCAACTGCTCGAAGCGGCGGGCTTCGACGGCAAGGCCGCCGTC
CAACCCGACAGCGCCCTGGTGGTGCTGCGGCTGGTCATTGGGCCGATTCCGGCGGCGGCGGCGGCGCTGGGTTTGTGGTT
TGCCTGGCGCTATCCGATTACCCGCGAGCGGCACCGGCAAATTCTCGAAGCGCTGGCGGCGCGCCGCCCTGCCGCCTGA

Upstream 100 bases:

>100_bases
CACGCGCCCGGGTGGGGGACAGCTCGGTCAATGTCCAGGATGGGGTACCGCCGCGACCCACCTGTGGGATCGTGGCAGTA
TCGCCCGAGGAACCTCTGCT

Downstream 100 bases:

>100_bases
AGGTGCAAAAGTACCGCCGCCGGGCCGCACCATCCGGCGGCGGCATCGGTGTTAAGGTGTTCTCCATGGATGAGCTGGAG
CGATCGTATTGGGTGCTTGG

Product: sugar transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 452; Mature: 451

Protein sequence:

>452_residues
MPPKPERLNLAQKLAYGAGDFGPAVTANLLVFFWLPFLTDAAGLAAGAAGSILAISKIWDAINDPIVGVLTDRTRSRWGR
RRPWILLGAIPFGFTFFAQWLVPFAGNAGAAFWYYLAMALLFNSLYTAVNLPYTALTPELTDDYDERTGLSKFRFAFSIG
GSLLSGVTFPLILAAFPTRPAFGNALGAGIWAVLAVLPLFWCFFGTRERFATPASERLPLARQLRIALANRPYLDVVGIY
LCSWFAVQLIATVVPYYVRYWMNLPDSWLAATIFAIQGTALAMLFVWSALSARLGKKRVFYLGTGFFLLAMLGLMLLSPG
QAVWMLVLAVVAGVGVSTVYLIPWSMLPDVIDLDELQTGERREGVFYALLVLLQKVCLAASLLLVGQLLEAAGFDGKAAV
QPDSALVVLRLVIGPIPAAAAALGLWFAWRYPITRERHRQILEALAARRPAA

Sequences:

>Translated_452_residues
MPPKPERLNLAQKLAYGAGDFGPAVTANLLVFFWLPFLTDAAGLAAGAAGSILAISKIWDAINDPIVGVLTDRTRSRWGR
RRPWILLGAIPFGFTFFAQWLVPFAGNAGAAFWYYLAMALLFNSLYTAVNLPYTALTPELTDDYDERTGLSKFRFAFSIG
GSLLSGVTFPLILAAFPTRPAFGNALGAGIWAVLAVLPLFWCFFGTRERFATPASERLPLARQLRIALANRPYLDVVGIY
LCSWFAVQLIATVVPYYVRYWMNLPDSWLAATIFAIQGTALAMLFVWSALSARLGKKRVFYLGTGFFLLAMLGLMLLSPG
QAVWMLVLAVVAGVGVSTVYLIPWSMLPDVIDLDELQTGERREGVFYALLVLLQKVCLAASLLLVGQLLEAAGFDGKAAV
QPDSALVVLRLVIGPIPAAAAALGLWFAWRYPITRERHRQILEALAARRPAA
>Mature_451_residues
PPKPERLNLAQKLAYGAGDFGPAVTANLLVFFWLPFLTDAAGLAAGAAGSILAISKIWDAINDPIVGVLTDRTRSRWGRR
RPWILLGAIPFGFTFFAQWLVPFAGNAGAAFWYYLAMALLFNSLYTAVNLPYTALTPELTDDYDERTGLSKFRFAFSIGG
SLLSGVTFPLILAAFPTRPAFGNALGAGIWAVLAVLPLFWCFFGTRERFATPASERLPLARQLRIALANRPYLDVVGIYL
CSWFAVQLIATVVPYYVRYWMNLPDSWLAATIFAIQGTALAMLFVWSALSARLGKKRVFYLGTGFFLLAMLGLMLLSPGQ
AVWMLVLAVVAGVGVSTVYLIPWSMLPDVIDLDELQTGERREGVFYALLVLLQKVCLAASLLLVGQLLEAAGFDGKAAVQ
PDSALVVLRLVIGPIPAAAAALGLWFAWRYPITRERHRQILEALAARRPAA

Specific function: Unknown

COG id: COG2211

COG function: function code G; Na+/melibiose symporter and related transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:galactoside symporter (TC 2.A.2) family [H]

Homologues:

Organism=Homo sapiens, GI42713696, Length=482, Percent_Identity=27.1784232365145, Blast_Score=150, Evalue=2e-36,
Organism=Homo sapiens, GI211063479, Length=495, Percent_Identity=26.6666666666667, Blast_Score=141, Evalue=1e-33,
Organism=Homo sapiens, GI122937339, Length=476, Percent_Identity=27.9411764705882, Blast_Score=126, Evalue=4e-29,
Organism=Homo sapiens, GI111378395, Length=387, Percent_Identity=24.5478036175711, Blast_Score=78, Evalue=2e-14,
Organism=Homo sapiens, GI111378391, Length=387, Percent_Identity=24.5478036175711, Blast_Score=78, Evalue=2e-14,
Organism=Homo sapiens, GI111378386, Length=387, Percent_Identity=24.5478036175711, Blast_Score=77, Evalue=3e-14,
Organism=Escherichia coli, GI87082306, Length=454, Percent_Identity=30.3964757709251, Blast_Score=170, Evalue=1e-43,
Organism=Escherichia coli, GI1786466, Length=456, Percent_Identity=27.8508771929825, Blast_Score=166, Evalue=3e-42,
Organism=Escherichia coli, GI145693206, Length=461, Percent_Identity=26.8980477223427, Blast_Score=138, Evalue=7e-34,
Organism=Escherichia coli, GI48994989, Length=460, Percent_Identity=26.0869565217391, Blast_Score=130, Evalue=2e-31,
Organism=Escherichia coli, GI1790561, Length=446, Percent_Identity=25.3363228699552, Blast_Score=123, Evalue=3e-29,
Organism=Escherichia coli, GI1787902, Length=454, Percent_Identity=25.9911894273128, Blast_Score=108, Evalue=5e-25,
Organism=Caenorhabditis elegans, GI17567067, Length=377, Percent_Identity=19.893899204244, Blast_Score=72, Evalue=6e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016196
- InterPro:   IPR001927
- InterPro:   IPR018043 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49431; Mature: 49300

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: PS00872 NA_GALACTOSIDE_SYMP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPPKPERLNLAQKLAYGAGDFGPAVTANLLVFFWLPFLTDAAGLAAGAAGSILAISKIWD
CCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
AINDPIVGVLTDRTRSRWGRRRPWILLGAIPFGFTFFAQWLVPFAGNAGAAFWYYLAMAL
HHCCCEEEEECCHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
LFNSLYTAVNLPYTALTPELTDDYDERTGLSKFRFAFSIGGSLLSGVTFPLILAAFPTRP
HHHHHHHHHCCCHHHCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
AFGNALGAGIWAVLAVLPLFWCFFGTRERFATPASERLPLARQLRIALANRPYLDVVGIY
CCCHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHCCCHHHHHHHHHCCCCHHHHHHHH
LCSWFAVQLIATVVPYYVRYWMNLPDSWLAATIFAIQGTALAMLFVWSALSARLGKKRVF
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE
YLGTGFFLLAMLGLMLLSPGQAVWMLVLAVVAGVGVSTVYLIPWSMLPDVIDLDELQTGE
EECCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHEEECHHHCCCHHCHHHCCCCC
RREGVFYALLVLLQKVCLAASLLLVGQLLEAAGFDGKAAVQPDSALVVLRLVIGPIPAAA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCHHH
AALGLWFAWRYPITRERHRQILEALAARRPAA
HHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
PPKPERLNLAQKLAYGAGDFGPAVTANLLVFFWLPFLTDAAGLAAGAAGSILAISKIWD
CCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
AINDPIVGVLTDRTRSRWGRRRPWILLGAIPFGFTFFAQWLVPFAGNAGAAFWYYLAMAL
HHCCCEEEEECCHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
LFNSLYTAVNLPYTALTPELTDDYDERTGLSKFRFAFSIGGSLLSGVTFPLILAAFPTRP
HHHHHHHHHCCCHHHCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
AFGNALGAGIWAVLAVLPLFWCFFGTRERFATPASERLPLARQLRIALANRPYLDVVGIY
CCCHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHCCCHHHHHHHHHCCCCHHHHHHHH
LCSWFAVQLIATVVPYYVRYWMNLPDSWLAATIFAIQGTALAMLFVWSALSARLGKKRVF
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE
YLGTGFFLLAMLGLMLLSPGQAVWMLVLAVVAGVGVSTVYLIPWSMLPDVIDLDELQTGE
EECCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHEEECHHHCCCHHCHHHCCCCC
RREGVFYALLVLLQKVCLAASLLLVGQLLEAAGFDGKAAVQPDSALVVLRLVIGPIPAAA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCHHH
AALGLWFAWRYPITRERHRQILEALAARRPAA
HHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]