Click here to switch to the map view.

The map label for this gene is glf [C]

Identifier: 37523814

GI number: 37523814

Start: 4462705

End: 4464768

Strand: Direct

Name: glf [C]

Synonym: glr4245

Alternate gene names: 37523814

Gene position: 4462705-4464768 (Clockwise)

Preceding gene: 37523812

Following gene: 37523815

Centisome position: 95.79

GC content: 60.56

Gene sequence:

>2064_bases
GTGCCGTTTCCGAAAAGTCTACAGGCTCATCAATGCAGGGGAGGCCGGTGGCCGCTCCGGGGCGATCGCGTTAGCGTGGT
TGGAAACTTGTGCGCACCTGCAAATCCGTCGGGCGCATTGCAGCCTACCACCTGCCGCGCCGCACCCTTTGCCGCTTTGA
GATTAGCCGCCATGTCCCAATTCGACCAGGGTTCCGCACCCGTTTATGTCCTGGGGGGCGGGCCGGCGGGCCTTGCCGCC
GCCTATACGCTCACCAAATTGGGCTACCCCGTCGTGGTCGTCGAGCGCGACCACTGCGTGGGCGGATTGGCCCGGAGTAT
CGAACACAAAGGCTTTATTCTCGATTACGGTCCGCACCGCTTTTTCACCAAGCTCGCCCCTGTGCTCGCTTTCTGGGATG
AGGTGCTCGGATCCGAGCAGGTAACCGTCAACCGGCTGACACGCATTTACTACGGCGGCAAATATTTTTCTTATCCGCTC
AAGGCTTTCGAGGCGCTTTTCTCGCTGGGGTTTGTCGAAAGCGCCCGCATCGTGTTGTCCTACGCCCTGGCCCAACTGTT
TCCGAACCGCCGGCCCAAGCATTTTGCCGAGTGGGTGAGCGCCCGCTTCGGCAGGCGGCTGTTTGAAATTTTCTTCGAGG
GTTATACCGAAAAGCTCTGGGGCATCAAATGCACCGAGATTTCGGCAGACTGGGCGGCCCAGCGCATCAAGGGACTTTCG
CTGCTGAAGGCCGTCCGTAACGCCCTTTTGGGCAACGACGGCAAGGTCAAAAGCCTCATCGATCAGTTTCAATTCCCGCG
CCTGGGTTCGGGGCAGCTTTACGAGCGCACCGCCGACTACCTGACCGGTCACGGTCAGACAGTTTTGCTCGACACCGAGG
TAGTCGGCTTGCACCGGTCCGGCGAACAGGTTACCGCCCTTACCCTCAAGGACCGCCACAGCGGCCGGGAGGCGGTGGTC
GAGTGCTCCGCCGTCATATCTTCGATTCCGCTGTCGTTGCTTGTCCAGCAGCTGGAACCGGCCGCCCCCCCGGAGGTGCT
CTCGGCGGCCCGTTCGCTGAAATTTCGCAACACGGTGCTGGTGTATTTGTTCGTCGAGGGCGGCAATCTCTTTCCGGACA
ACTGGCTCTACATCAACGATCCGACCGTCGAGTTGGGGCGGGTGACCAATTTTGCCAACTGGTCGCAGGATATGCTGGGC
GATCGGACTTTGACACCGCTGTGTTGCGAATATTGGTGCCAGTTCGACGGCACTTGGAAGATGGCCGATCACGAATTGCT
CGCCCGTGCCGAGCGCGACTTGCGCCGGATCGGCTTGATGGGCAAACAAAAGGTCGCGGACGGTTTTGTCGTTCGCTTGC
CGCGCACCTATCCGATCTACGCCGGCAATTACAAGCAGGCCCTGGCCACCATCCAGGACTATCTGGGCCGGTTTGCCAAT
TTGCAGGCGGTGGGCCGCTACGGAGCCTTCAAGTACAACAACCAGGATCACAGTTTGCTGATGGGTATCCTCGCCGCTGA
GAATGTCGCAAATCCCGGCAAGCACGATCTCTGGTCGGTCAACTCCGACAGCGAATATCAAGAAGAAGCCAAATCCGGCG
AGAAAACGACCCCGGCCCCCCAGGGGCCGGTGACCCAGGGGCCGAAACTACCCGAGCCCATCGCCAAACTCGGCTCCCAG
ATGGGGGGATACCTGATCACGGGCGGTCTGGCAACGGTGGTGGACGTGGCGGTGTTTTCGGCCCTCACCCAAATCGGCCT
CTGGTACGTGGCGGCGCTGTGCGTCAGTTTCTTCGGGGGGCTTACCACCAACTTCGTTCTGAGCCGGCGCTTCGTGTTCG
GTGTCTACTGGAACAACTGGCGCTGGCAATTCGTGGTCTTCGCCACCGTCGCCCTCAACAGCCTGCTGGCCAACCTGGGG
CTGTTGCAACTGCTCATCAACGACGTGCAGATGGACGCGACCTTGGCCCGGCTGATCAGCGCCGCCTGTGTGGCACTCTT
GAGCTTCACAGGCCATAAACTCTATTCGTTTGCCAACCACGAGCGGGCGCTCAGCGCGGATTAG

Upstream 100 bases:

>100_bases
ATTGACCAGCAGAGCGAGGAGGCACCAGACGAGGGCGAGCCCGACGATTGCCGCAACGTCTTTCCAGCTGGGGAGGATTG
TCCGAGCCACGCTTGCACCT

Downstream 100 bases:

>100_bases
GCAGAGGGTTTTGGCCGCTGCGGACGGTGTTGAACCTGTGCAGCAGCCTGAGGCTTCTCGCTAAAACCAGCTAAAATAGC
CCTCGGACAAAGTAAGGAGA

Product: hypothetical protein

Products: UDP-D-galacto-1,4-furanose [C]

Alternate protein names: FAD Dependent Oxidoreductase; UDP-Galactopyranose Mutase; Amine Oxidase Flavin-Containing; Protoporphyrinogen Oxidase-Like Protein; Amine Oxidase Flavin-Containing Superfamily; Flavin Containing Amine Oxidoreductase; LOW QUALITY PROTEIN Protoporphyrinogen Oxidase; Oxidoreductase; Glycosyl Transferase Family 2 Protein; FAD-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; FAD-Dependent Oxidoreductase; Flavin-Containing Amine Oxidoreductase Family Protein; Oxidase

Number of amino acids: Translated: 687; Mature: 686

Protein sequence:

>687_residues
MPFPKSLQAHQCRGGRWPLRGDRVSVVGNLCAPANPSGALQPTTCRAAPFAALRLAAMSQFDQGSAPVYVLGGGPAGLAA
AYTLTKLGYPVVVVERDHCVGGLARSIEHKGFILDYGPHRFFTKLAPVLAFWDEVLGSEQVTVNRLTRIYYGGKYFSYPL
KAFEALFSLGFVESARIVLSYALAQLFPNRRPKHFAEWVSARFGRRLFEIFFEGYTEKLWGIKCTEISADWAAQRIKGLS
LLKAVRNALLGNDGKVKSLIDQFQFPRLGSGQLYERTADYLTGHGQTVLLDTEVVGLHRSGEQVTALTLKDRHSGREAVV
ECSAVISSIPLSLLVQQLEPAAPPEVLSAARSLKFRNTVLVYLFVEGGNLFPDNWLYINDPTVELGRVTNFANWSQDMLG
DRTLTPLCCEYWCQFDGTWKMADHELLARAERDLRRIGLMGKQKVADGFVVRLPRTYPIYAGNYKQALATIQDYLGRFAN
LQAVGRYGAFKYNNQDHSLLMGILAAENVANPGKHDLWSVNSDSEYQEEAKSGEKTTPAPQGPVTQGPKLPEPIAKLGSQ
MGGYLITGGLATVVDVAVFSALTQIGLWYVAALCVSFFGGLTTNFVLSRRFVFGVYWNNWRWQFVVFATVALNSLLANLG
LLQLLINDVQMDATLARLISAACVALLSFTGHKLYSFANHERALSAD

Sequences:

>Translated_687_residues
MPFPKSLQAHQCRGGRWPLRGDRVSVVGNLCAPANPSGALQPTTCRAAPFAALRLAAMSQFDQGSAPVYVLGGGPAGLAA
AYTLTKLGYPVVVVERDHCVGGLARSIEHKGFILDYGPHRFFTKLAPVLAFWDEVLGSEQVTVNRLTRIYYGGKYFSYPL
KAFEALFSLGFVESARIVLSYALAQLFPNRRPKHFAEWVSARFGRRLFEIFFEGYTEKLWGIKCTEISADWAAQRIKGLS
LLKAVRNALLGNDGKVKSLIDQFQFPRLGSGQLYERTADYLTGHGQTVLLDTEVVGLHRSGEQVTALTLKDRHSGREAVV
ECSAVISSIPLSLLVQQLEPAAPPEVLSAARSLKFRNTVLVYLFVEGGNLFPDNWLYINDPTVELGRVTNFANWSQDMLG
DRTLTPLCCEYWCQFDGTWKMADHELLARAERDLRRIGLMGKQKVADGFVVRLPRTYPIYAGNYKQALATIQDYLGRFAN
LQAVGRYGAFKYNNQDHSLLMGILAAENVANPGKHDLWSVNSDSEYQEEAKSGEKTTPAPQGPVTQGPKLPEPIAKLGSQ
MGGYLITGGLATVVDVAVFSALTQIGLWYVAALCVSFFGGLTTNFVLSRRFVFGVYWNNWRWQFVVFATVALNSLLANLG
LLQLLINDVQMDATLARLISAACVALLSFTGHKLYSFANHERALSAD
>Mature_686_residues
PFPKSLQAHQCRGGRWPLRGDRVSVVGNLCAPANPSGALQPTTCRAAPFAALRLAAMSQFDQGSAPVYVLGGGPAGLAAA
YTLTKLGYPVVVVERDHCVGGLARSIEHKGFILDYGPHRFFTKLAPVLAFWDEVLGSEQVTVNRLTRIYYGGKYFSYPLK
AFEALFSLGFVESARIVLSYALAQLFPNRRPKHFAEWVSARFGRRLFEIFFEGYTEKLWGIKCTEISADWAAQRIKGLSL
LKAVRNALLGNDGKVKSLIDQFQFPRLGSGQLYERTADYLTGHGQTVLLDTEVVGLHRSGEQVTALTLKDRHSGREAVVE
CSAVISSIPLSLLVQQLEPAAPPEVLSAARSLKFRNTVLVYLFVEGGNLFPDNWLYINDPTVELGRVTNFANWSQDMLGD
RTLTPLCCEYWCQFDGTWKMADHELLARAERDLRRIGLMGKQKVADGFVVRLPRTYPIYAGNYKQALATIQDYLGRFANL
QAVGRYGAFKYNNQDHSLLMGILAAENVANPGKHDLWSVNSDSEYQEEAKSGEKTTPAPQGPVTQGPKLPEPIAKLGSQM
GGYLITGGLATVVDVAVFSALTQIGLWYVAALCVSFFGGLTTNFVLSRRFVFGVYWNNWRWQFVVFATVALNSLLANLGL
LQLLINDVQMDATLARLISAACVALLSFTGHKLYSFANHERALSAD

Specific function: Involved In The Conversion Of UDP-Galp Into UDP-Galf Through A 2-Keto Intermediate. [C]

COG id: COG1232

COG function: function code H; Protoporphyrinogen oxidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 5.4.99.9 [C]

Molecular weight: Translated: 75794; Mature: 75663

Theoretical pI: Translated: 8.86; Mature: 8.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPFPKSLQAHQCRGGRWPLRGDRVSVVGNLCAPANPSGALQPTTCRAAPFAALRLAAMSQ
CCCCCCCCHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
FDQGSAPVYVLGGGPAGLAAAYTLTKLGYPVVVVERDHCVGGLARSIEHKGFILDYGPHR
CCCCCCCEEEECCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCCEEEECCCHH
FFTKLAPVLAFWDEVLGSEQVTVNRLTRIYYGGKYFSYPLKAFEALFSLGFVESARIVLS
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHEECCEEEHHHHHHHHHHHHHHHHHHHHHHHH
YALAQLFPNRRPKHFAEWVSARFGRRLFEIFFEGYTEKLWGIKCTEISADWAAQRIKGLS
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHH
LLKAVRNALLGNDGKVKSLIDQFQFPRLGSGQLYERTADYLTGHGQTVLLDTEVVGLHRS
HHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCEEEEEEEEEEEECC
GEQVTALTLKDRHSGREAVVECSAVISSIPLSLLVQQLEPAAPPEVLSAARSLKFRNTVL
CCEEEEEEECCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHCCCEEE
VYLFVEGGNLFPDNWLYINDPTVELGRVTNFANWSQDMLGDRTLTPLCCEYWCQFDGTWK
EEEEEECCCCCCCCEEEECCCCEEHHCCCCCCCCCHHHCCCCCCHHHHHHHHHCCCCCEE
MADHELLARAERDLRRIGLMGKQKVADGFVVRLPRTYPIYAGNYKQALATIQDYLGRFAN
HHHHHHHHHHHHHHHHHCCCCCHHHCCCEEEECCCCCCEECCCHHHHHHHHHHHHHHHHC
LQAVGRYGAFKYNNQDHSLLMGILAAENVANPGKHDLWSVNSDSEYQEEAKSGEKTTPAP
HHHHHCCCCEEECCCCHHHHHHHHHHHCCCCCCCCCCEECCCCHHHHHHHHCCCCCCCCC
QGPVTQGPKLPEPIAKLGSQMGGYLITGGLATVVDVAVFSALTQIGLWYVAALCVSFFGG
CCCCCCCCCCCHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
LTTNFVLSRRFVFGVYWNNWRWQFVVFATVALNSLLANLGLLQLLINDVQMDATLARLIS
HHHHHHHHHEEEEEEEECCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AACVALLSFTGHKLYSFANHERALSAD
HHHHHHHHHCCHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
PFPKSLQAHQCRGGRWPLRGDRVSVVGNLCAPANPSGALQPTTCRAAPFAALRLAAMSQ
CCCCCCCHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
FDQGSAPVYVLGGGPAGLAAAYTLTKLGYPVVVVERDHCVGGLARSIEHKGFILDYGPHR
CCCCCCCEEEECCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCCEEEECCCHH
FFTKLAPVLAFWDEVLGSEQVTVNRLTRIYYGGKYFSYPLKAFEALFSLGFVESARIVLS
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHEECCEEEHHHHHHHHHHHHHHHHHHHHHHHH
YALAQLFPNRRPKHFAEWVSARFGRRLFEIFFEGYTEKLWGIKCTEISADWAAQRIKGLS
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHH
LLKAVRNALLGNDGKVKSLIDQFQFPRLGSGQLYERTADYLTGHGQTVLLDTEVVGLHRS
HHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCEEEEEEEEEEEECC
GEQVTALTLKDRHSGREAVVECSAVISSIPLSLLVQQLEPAAPPEVLSAARSLKFRNTVL
CCEEEEEEECCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHCCCEEE
VYLFVEGGNLFPDNWLYINDPTVELGRVTNFANWSQDMLGDRTLTPLCCEYWCQFDGTWK
EEEEEECCCCCCCCEEEECCCCEEHHCCCCCCCCCHHHCCCCCCHHHHHHHHHCCCCCEE
MADHELLARAERDLRRIGLMGKQKVADGFVVRLPRTYPIYAGNYKQALATIQDYLGRFAN
HHHHHHHHHHHHHHHHHCCCCCHHHCCCEEEECCCCCCEECCCHHHHHHHHHHHHHHHHC
LQAVGRYGAFKYNNQDHSLLMGILAAENVANPGKHDLWSVNSDSEYQEEAKSGEKTTPAP
HHHHHCCCCEEECCCCHHHHHHHHHHHCCCCCCCCCCEECCCCHHHHHHHHCCCCCCCCC
QGPVTQGPKLPEPIAKLGSQMGGYLITGGLATVVDVAVFSALTQIGLWYVAALCVSFFGG
CCCCCCCCCCCHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
LTTNFVLSRRFVFGVYWNNWRWQFVVFATVALNSLLANLGLLQLLINDVQMDATLARLIS
HHHHHHHHHEEEEEEEECCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AACVALLSFTGHKLYSFANHERALSAD
HHHHHHHHHCCHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: FAD. [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: UDPgalactose [C]

Specific reaction: UDPgalactose --> UDP-D-galacto-1,4-furanose [C]

General reaction: Group transfer (intramolecular Isomerization) [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA