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The map label for this gene is rcaC [H]

Identifier: 37523780

GI number: 37523780

Start: 4407699

End: 4409534

Strand: Direct

Name: rcaC [H]

Synonym: glr4211

Alternate gene names: 37523780

Gene position: 4407699-4409534 (Clockwise)

Preceding gene: 37523777

Following gene: 37523781

Centisome position: 94.61

GC content: 66.56

Gene sequence:

>1836_bases
ATGAAAGTGCTGTTGGCGGAAGACGACGAATCCGTAGCCGAGGCGCTGCGGGAGTTTCTGGTGCACCAGCGCCACCTGGT
GGACGTCGCGGGCGACGGGGAGACGGCCTGGAACTTGATCGAACTGGGCAACTACGACTTGATTTTGCTCGATGTGCTGC
TGCCCAAGCTGGATGGGATCAGCCTGTGCCGCCGGTTGCGCTCGAAGGGGCACCGTATGCCGGTGCTGCTTTTGACCGGA
CTCGATGCGAGCACCGACAAGGTGGCGGGCCTCGATGCCGGAGCGGACGATTATGTCGTCAAACCCTGCGATCTTTCTGA
ACTGGCGGCGCGCATCCGGGCGCTGTTGCGCCGGGGGGGAGCGGCTTTGCCGCCGGTACTCGAGTGGGGACCGTTGCGCC
TCGATCCGAACACCTGCGAGGTGAGTTATCAGGGACAGCCGCTGCACCTGACCCCCAAGGAGTACAACTTGCTGGAGCTG
TTTTTGCGCGGTGGGCGGCGGGTCTACAGCCGCCGTGCCATCGTCGATCACCTCTGGCCTTTTGAAGAACCCCCCGAGGA
AGATACCGTCAAAGCCCATGTCAAGGGACTGCGCCACAAATTGCGCGCCGTGGGCGCCCCCGCGGACCTCATCGAAACGG
TCTACGGCCTGGGATACCGCCTCAAACCCCAGGCAGGCGCCGACGCCGAAGCGCTCACAGTGGCCGTCTCGCCCGCTTCG
ATGCGCCAGAAACTGCATTCGGCCCTGGCCGGGGTCTGGGAGCGCAGCAAAGCCAATGTACTGGCCCGCGTGGCGGTGCT
GGAGCGCGCGAGCCTCGCCATGCTCGAAGCACGCCTCGACGATGCGCTCAGGCAGCAGGCCGAGCACGAAGCCCACAAGC
TTGCAGGCTCGCTGGGGACTTTTGGTTTTAGCGAGGGTTCGCGCCTGGCGCGCTCGATGGAGCAAGCTTTGCAGCCGGGG
CTGTCCCTCACCCGCGAGCGGGCGCTGCGCTTTGCCGAGGGGCTCGTCGCCCTGCAGCGCGAACTGGAACGCGCCGCCCC
CGCCCCTGAGCGCTCCCCCGAGAATCATCCGCGCGTGCTCGCCGTCGACCCGGACCAACCGCTTGCCCAGGCACTGCAGG
CCGCCGCGCGGGAGGTGTTCCTGCTCGATGTCGTCTGCGGCGTGGAGGCGGCGCACGTTTGGATGGAGCACCATCGCCCA
GATCTGGTCGTGCTCGACTTGCACCCGGCCTTGGCGGAGCGATTGCCGGCGGCGGACGAAGCGGCGCGCTGGTCGCTTTT
GGGGGAACTCGCCGCCCGCCGGCCGCCCATCCCGGCGCTGGTGCTCAGCGATCGCCATTCTTTTGAGGAGCGCATCGAGG
CCACCCGGCTCGGCAGCCGTGCATTTCTCGAAAAACCGGTCGGACCGGAGCGGGTGGTCGGCACCGTCGAACGGGTGCTC
GAGCGCGCCCGCCGCCGCACCGCCAAGGTGATGATCGTCGATGACGATGCGCCGCTGCTCGCCGCCCTGCGCGCTCTGCT
TGCTCCCTGGGGATTGCAGCTGCTCACCCTGGCCGACCCGCTGCAATTTTGGCGGCAGCTTGAATCCTTTCGACCCGATT
TGCTGGTGCTCGACGTCGAGATGCCCCACCTGAGCGGCATCGAATTATGCCGGATCGTGCGCGGCGACCCGCAGTGGCAG
TGGCTGCCGGTGCTGTTTCTTTCCGCCCATACCGACGAAGAGACCGTCGAGCGCGCCTGGGCCGGCGGAGCCGACGACTT
TGTGGCCAAACCCGTCTCCGGTCCGAATCTGGCTATGCGCATTCTCAACCGTCTTGAACGCAGACGCTCCCTGTAA

Upstream 100 bases:

>100_bases
GCGCAGTAGAAAATAGACGGCGGGCTGAGGCTTTGTTGCGCGAGCGCAGAGCACGTGCCGCCGGGGTAGCGTGGAAGAGG
TTCGAGCGCGCCAGGTTGGT

Downstream 100 bases:

>100_bases
TGAACGAATCCTCCCCCTCGCCCGCCAACCTGCACGCCACGCTGCTCAAGGAGCTGGCGGACATCAAGTTTGCTCTCGAT
CAATCGTCGATTGTGGCGAT

Product: two-component response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 611; Mature: 611

Protein sequence:

>611_residues
MKVLLAEDDESVAEALREFLVHQRHLVDVAGDGETAWNLIELGNYDLILLDVLLPKLDGISLCRRLRSKGHRMPVLLLTG
LDASTDKVAGLDAGADDYVVKPCDLSELAARIRALLRRGGAALPPVLEWGPLRLDPNTCEVSYQGQPLHLTPKEYNLLEL
FLRGGRRVYSRRAIVDHLWPFEEPPEEDTVKAHVKGLRHKLRAVGAPADLIETVYGLGYRLKPQAGADAEALTVAVSPAS
MRQKLHSALAGVWERSKANVLARVAVLERASLAMLEARLDDALRQQAEHEAHKLAGSLGTFGFSEGSRLARSMEQALQPG
LSLTRERALRFAEGLVALQRELERAAPAPERSPENHPRVLAVDPDQPLAQALQAAAREVFLLDVVCGVEAAHVWMEHHRP
DLVVLDLHPALAERLPAADEAARWSLLGELAARRPPIPALVLSDRHSFEERIEATRLGSRAFLEKPVGPERVVGTVERVL
ERARRRTAKVMIVDDDAPLLAALRALLAPWGLQLLTLADPLQFWRQLESFRPDLLVLDVEMPHLSGIELCRIVRGDPQWQ
WLPVLFLSAHTDEETVERAWAGGADDFVAKPVSGPNLAMRILNRLERRRSL

Sequences:

>Translated_611_residues
MKVLLAEDDESVAEALREFLVHQRHLVDVAGDGETAWNLIELGNYDLILLDVLLPKLDGISLCRRLRSKGHRMPVLLLTG
LDASTDKVAGLDAGADDYVVKPCDLSELAARIRALLRRGGAALPPVLEWGPLRLDPNTCEVSYQGQPLHLTPKEYNLLEL
FLRGGRRVYSRRAIVDHLWPFEEPPEEDTVKAHVKGLRHKLRAVGAPADLIETVYGLGYRLKPQAGADAEALTVAVSPAS
MRQKLHSALAGVWERSKANVLARVAVLERASLAMLEARLDDALRQQAEHEAHKLAGSLGTFGFSEGSRLARSMEQALQPG
LSLTRERALRFAEGLVALQRELERAAPAPERSPENHPRVLAVDPDQPLAQALQAAAREVFLLDVVCGVEAAHVWMEHHRP
DLVVLDLHPALAERLPAADEAARWSLLGELAARRPPIPALVLSDRHSFEERIEATRLGSRAFLEKPVGPERVVGTVERVL
ERARRRTAKVMIVDDDAPLLAALRALLAPWGLQLLTLADPLQFWRQLESFRPDLLVLDVEMPHLSGIELCRIVRGDPQWQ
WLPVLFLSAHTDEETVERAWAGGADDFVAKPVSGPNLAMRILNRLERRRSL
>Mature_611_residues
MKVLLAEDDESVAEALREFLVHQRHLVDVAGDGETAWNLIELGNYDLILLDVLLPKLDGISLCRRLRSKGHRMPVLLLTG
LDASTDKVAGLDAGADDYVVKPCDLSELAARIRALLRRGGAALPPVLEWGPLRLDPNTCEVSYQGQPLHLTPKEYNLLEL
FLRGGRRVYSRRAIVDHLWPFEEPPEEDTVKAHVKGLRHKLRAVGAPADLIETVYGLGYRLKPQAGADAEALTVAVSPAS
MRQKLHSALAGVWERSKANVLARVAVLERASLAMLEARLDDALRQQAEHEAHKLAGSLGTFGFSEGSRLARSMEQALQPG
LSLTRERALRFAEGLVALQRELERAAPAPERSPENHPRVLAVDPDQPLAQALQAAAREVFLLDVVCGVEAAHVWMEHHRP
DLVVLDLHPALAERLPAADEAARWSLLGELAARRPPIPALVLSDRHSFEERIEATRLGSRAFLEKPVGPERVVGTVERVL
ERARRRTAKVMIVDDDAPLLAALRALLAPWGLQLLTLADPLQFWRQLESFRPDLLVLDVEMPHLSGIELCRIVRGDPQWQ
WLPVLFLSAHTDEETVERAWAGGADDFVAKPVSGPNLAMRILNRLERRRSL

Specific function: Required for chromatic adaptation. Thought to be a positive regulator of phycobiliproteins [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 3 response regulatory domains [H]

Homologues:

Organism=Escherichia coli, GI1786784, Length=227, Percent_Identity=39.2070484581498, Blast_Score=151, Evalue=1e-37,
Organism=Escherichia coli, GI1789402, Length=221, Percent_Identity=39.8190045248869, Blast_Score=149, Evalue=5e-37,
Organism=Escherichia coli, GI1790552, Length=222, Percent_Identity=40.5405405405405, Blast_Score=137, Evalue=2e-33,
Organism=Escherichia coli, GI1790860, Length=222, Percent_Identity=36.036036036036, Blast_Score=129, Evalue=6e-31,
Organism=Escherichia coli, GI87082012, Length=221, Percent_Identity=36.1990950226244, Blast_Score=129, Evalue=8e-31,
Organism=Escherichia coli, GI1786599, Length=224, Percent_Identity=36.6071428571429, Blast_Score=127, Evalue=3e-30,
Organism=Escherichia coli, GI1789809, Length=232, Percent_Identity=32.3275862068966, Blast_Score=125, Evalue=7e-30,
Organism=Escherichia coli, GI1788394, Length=221, Percent_Identity=32.1266968325792, Blast_Score=124, Evalue=1e-29,
Organism=Escherichia coli, GI1787375, Length=219, Percent_Identity=35.1598173515982, Blast_Score=124, Evalue=2e-29,
Organism=Escherichia coli, GI2367329, Length=228, Percent_Identity=36.8421052631579, Blast_Score=107, Evalue=3e-24,
Organism=Escherichia coli, GI1786911, Length=231, Percent_Identity=32.034632034632, Blast_Score=100, Evalue=3e-22,
Organism=Escherichia coli, GI1787229, Length=227, Percent_Identity=32.15859030837, Blast_Score=97, Evalue=2e-21,
Organism=Escherichia coli, GI1790863, Length=229, Percent_Identity=27.0742358078603, Blast_Score=85, Evalue=1e-17,
Organism=Escherichia coli, GI145693140, Length=236, Percent_Identity=30.0847457627119, Blast_Score=82, Evalue=8e-17,
Organism=Escherichia coli, GI1788550, Length=138, Percent_Identity=32.6086956521739, Blast_Score=70, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR008207
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01627 Hpt; PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 67742; Mature: 67742

Theoretical pI: Translated: 6.43; Mature: 6.43

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVLLAEDDESVAEALREFLVHQRHLVDVAGDGETAWNLIELGNYDLILLDVLLPKLDGI
CEEEEECCCHHHHHHHHHHHHHHHHHEEECCCCCHHHHHEEECCCCEEHHHHHHCCCCHH
SLCRRLRSKGHRMPVLLLTGLDASTDKVAGLDAGADDYVVKPCDLSELAARIRALLRRGG
HHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHCCC
AALPPVLEWGPLRLDPNTCEVSYQGQPLHLTPKEYNLLELFLRGGRRVYSRRAIVDHLWP
CCCCCCCCCCCEEECCCCEEEEECCCCEEECCCHHHHHHHHHHCCHHHHHHHHHHHHHCC
FEEPPEEDTVKAHVKGLRHKLRAVGAPADLIETVYGLGYRLKPQAGADAEALTVAVSPAS
CCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCEEECCCCCCCCCEEEEEECCHH
MRQKLHSALAGVWERSKANVLARVAVLERASLAMLEARLDDALRQQAEHEAHKLAGSLGT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
FGFSEGSRLARSMEQALQPGLSLTRERALRFAEGLVALQRELERAAPAPERSPENHPRVL
CCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEE
AVDPDQPLAQALQAAAREVFLLDVVCGVEAAHVWMEHHRPDLVVLDLHPALAERLPAADE
EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHCCCCHH
AARWSLLGELAARRPPIPALVLSDRHSFEERIEATRLGSRAFLEKPVGPERVVGTVERVL
HHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHH
ERARRRTAKVMIVDDDAPLLAALRALLAPWGLQLLTLADPLQFWRQLESFRPDLLVLDVE
HHHHHHHEEEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEC
MPHLSGIELCRIVRGDPQWQWLPVLFLSAHTDEETVERAWAGGADDFVAKPVSGPNLAMR
CCCCCHHHHHHHHCCCCCCEEEEEEEEECCCCHHHHHHHHCCCCCHHHCCCCCCHHHHHH
ILNRLERRRSL
HHHHHHHHHCC
>Mature Secondary Structure
MKVLLAEDDESVAEALREFLVHQRHLVDVAGDGETAWNLIELGNYDLILLDVLLPKLDGI
CEEEEECCCHHHHHHHHHHHHHHHHHEEECCCCCHHHHHEEECCCCEEHHHHHHCCCCHH
SLCRRLRSKGHRMPVLLLTGLDASTDKVAGLDAGADDYVVKPCDLSELAARIRALLRRGG
HHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHCCC
AALPPVLEWGPLRLDPNTCEVSYQGQPLHLTPKEYNLLELFLRGGRRVYSRRAIVDHLWP
CCCCCCCCCCCEEECCCCEEEEECCCCEEECCCHHHHHHHHHHCCHHHHHHHHHHHHHCC
FEEPPEEDTVKAHVKGLRHKLRAVGAPADLIETVYGLGYRLKPQAGADAEALTVAVSPAS
CCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCEEECCCCCCCCCEEEEEECCHH
MRQKLHSALAGVWERSKANVLARVAVLERASLAMLEARLDDALRQQAEHEAHKLAGSLGT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
FGFSEGSRLARSMEQALQPGLSLTRERALRFAEGLVALQRELERAAPAPERSPENHPRVL
CCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEE
AVDPDQPLAQALQAAAREVFLLDVVCGVEAAHVWMEHHRPDLVVLDLHPALAERLPAADE
EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHCCCCHH
AARWSLLGELAARRPPIPALVLSDRHSFEERIEATRLGSRAFLEKPVGPERVVGTVERVL
HHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHH
ERARRRTAKVMIVDDDAPLLAALRALLAPWGLQLLTLADPLQFWRQLESFRPDLLVLDVE
HHHHHHHEEEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEC
MPHLSGIELCRIVRGDPQWQWLPVLFLSAHTDEETVERAWAGGADDFVAKPVSGPNLAMR
CCCCCHHHHHHHHCCCCCCEEEEEEEEECCCCHHHHHHHHCCCCCHHHCCCCCCHHHHHH
ILNRLERRRSL
HHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1409650 [H]